RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 GNG4P50150 75 aa4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 RPL36AP83881 106 aaKnown RBP4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 LAGE3Q14657 143 aa4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 CENPWQ5EE01 88 aa4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 SPANXN1Q5VSR9 72 aa4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 C9orf62Q8N4C0 152 aa4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 OR10AG1Q8NH19 301 aa4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 RPL36ALQ969Q0 106 aaKnown RBP4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 DAZAP1Q96EP5 407 aaKnown RBP4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 Q9HAA7 133 aa4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 VAX2Q9UIW0 290 aa4.3□□□□□ -1.72
CTDSPL-208ENST00000486978 TRBV7-3A0A075B6L6 115 aa4.29□□□□□ -1.72
CTDSPL-208ENST00000486978 RAB19A4D1S5 217 aa4.29□□□□□ -1.72
CTDSPL-208ENST00000486978 C19orf71A6NCJ1 209 aa4.29□□□□□ -1.72
CTDSPL-208ENST00000486978 IGLV2-8P01709 118 aa4.29□□□□□ -1.72
CTDSPL-208ENST00000486978 RPS20P60866 119 aaKnown RBP4.29□□□□□ -1.72
CTDSPL-208ENST00000486978 RAB4BP61018 213 aa4.29□□□□□ -1.72
CTDSPL-208ENST00000486978 ZNF56Q15929 161 aa4.29□□□□□ -1.72
CTDSPL-208ENST00000486978 OR2D3Q8NGH3 330 aa4.29□□□□□ -1.72
CTDSPL-208ENST00000486978 AP1S3Q96PC3 154 aa4.29□□□□□ -1.72
CTDSPL-208ENST00000486978 MED9Q9NWA0 146 aa4.29□□□□□ -1.72
CTDSPL-208ENST00000486978 TRBV20OR9-2A0A075B6H5 130 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 TRAV8-3A0A0A6YYJ7 113 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 MUC21A0A0G2JKD1 596 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 MUC21A0A140T8X8 626 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 XKRY2A2RUG3 117 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 P01737 135 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 IGLC6P0CF74 106 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 SMIM17P0DL12 118 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 UBE2D3P61077 147 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 UBE2D2P62837 147 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 BLOC1S1P78537 153 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 TOR2AQ5JU69 321 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 ALKAL2Q6UX46 152 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 DAZ4Q86SG3 579 aaKnown RBP4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 NIT1Q86X76 327 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 FER1L6-AS1Q8NA97 138 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 NEXN-AS1Q8NBZ9 246 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 OR10G8Q8NGN5 311 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 TM2D2Q9BX73 214 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 BIN3Q9NQY0 253 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 DAZ3Q9NR90 486 aaKnown RBP4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 FAM30AQ9NZY2 134 aa4.28□□□□□ -1.72
CTDSPL-208ENST00000486978 MUC2Q02817 5179 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 LRCOL1A6NCL2 159 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 RBFOX3A6NFN3 312 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 F5H697 171 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 GZMBP10144 247 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 SSTP61278 116 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 CACNG7P62955 275 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 NTN5Q8WTR8 489 aaPredicted RBP4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 CHCHD7Q9BUK0 85 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 TPPP3Q9BW30 176 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 KIF25-AS1Q9Y6Z4 181 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 URGCP-MRPS24S4R325 110 aa4.27□□□□□ -1.73
CTDSPL-208ENST00000486978 A0A087WX48 190 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 TRBV6-8A0A0A6YYG3 113 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 F2Z2F3 143 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 TMEM250H0YL14 139 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 MGPP08493 103 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 TRGC1P0CF51 173 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 ELOBQ15370 118 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 KCNIP4Q6PIL6 250 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 Q8N814 137 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 LYPD6BQ8NI32 183 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 RMI2Q96E14 147 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 COX11Q9Y6N1 276 aa4.26□□□□□ -1.73
CTDSPL-208ENST00000486978 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 H7C1H1 209 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 K7EN84 100 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 GCSHP23434 173 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 CTRLP40313 264 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 NKX2-5P52952 324 aaPredicted RBP4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 PKIAP61925 76 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 TMEM97Q5BJF2 176 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 LYZL1Q6UWQ5 148 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 NUDT10Q8NFP7 164 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 OCC1Q8TAD7 63 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 NUDT11Q96G61 164 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 RPP21Q9H633 154 aaKnown RBP4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 KLK12Q9UKR0 248 aa4.25□□□□□ -1.73
CTDSPL-208ENST00000486978 IGKV2D-24A0A075B6R9 120 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 A0A1B0GVG6 124 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 TMEM262E9PQX1 116 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 M0QY20 66 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 NTF3P20783 257 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 Q0VG73 95 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 WFDC2Q14508 124 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 SUMO4Q6EEV6 95 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 WDR73Q6P4I2 378 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 NTM-AS1Q6ZSK4 140 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 DEFB104AQ8WTQ1 72 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 UBE2WQ96B02 151 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 DNAJC30Q96LL9 226 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 CNFNQ9BYD5 112 aa4.24□□□□□ -1.73
CTDSPL-208ENST00000486978 RNASE7Q9H1E1 156 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms