RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 APLNQ9ULZ1 77 aa11□□□□□ -0.65
APOE-205ENST00000485628 A0A0J9YY99 117 aa10.99□□□□□ -0.65
APOE-205ENST00000485628 PRSS47A8MTI9 375 aa10.99□□□□□ -0.65
APOE-205ENST00000485628 H7C1H1 209 aa10.99□□□□□ -0.65
APOE-205ENST00000485628 PPBPP02775 128 aa10.99□□□□□ -0.65
APOE-205ENST00000485628 DNAJC30Q96LL9 226 aa10.99□□□□□ -0.65
APOE-205ENST00000485628 TRBV7-3A0A075B6L6 115 aa10.98□□□□□ -0.65
APOE-205ENST00000485628 GYPEP15421 78 aa10.98□□□□□ -0.65
APOE-205ENST00000485628 RAB5AP20339 215 aa10.98□□□□□ -0.65
APOE-205ENST00000485628 UBE2D3P61077 147 aa10.98□□□□□ -0.65
APOE-205ENST00000485628 UBE2D2P62837 147 aa10.98□□□□□ -0.65
APOE-205ENST00000485628 C15orf53Q8NAA6 179 aa10.98□□□□□ -0.65
APOE-205ENST00000485628 RPL39LQ96EH5 51 aaKnown RBP10.98□□□□□ -0.65
APOE-205ENST00000485628 PLECQ15149 4684 aaKnown RBP10.97□□□□□ -0.65
APOE-205ENST00000485628 D6R8Y8 96 aa10.97□□□□□ -0.65
APOE-205ENST00000485628 SMKR1H3BMG3 65 aa10.97□□□□□ -0.65
APOE-205ENST00000485628 C3orf84H3BNL1 204 aa10.97□□□□□ -0.65
APOE-205ENST00000485628 APCSP02743 223 aa10.97□□□□□ -0.65
APOE-205ENST00000485628 POLR2KP53803 58 aaKnown RBP10.97□□□□□ -0.65
APOE-205ENST00000485628 TCTAP57738 103 aa10.97□□□□□ -0.65
APOE-205ENST00000485628 MRPL18Q9H0U6 180 aaKnown RBP10.97□□□□□ -0.65
APOE-205ENST00000485628 IGLL5B9A064 214 aa10.96□□□□□ -0.65
APOE-205ENST00000485628 CKS2P33552 79 aa10.96□□□□□ -0.65
APOE-205ENST00000485628 RPL32P62910 135 aaKnown RBP10.96□□□□□ -0.65
APOE-205ENST00000485628 MRPL23Q16540 153 aaKnown RBP10.96□□□□□ -0.65
APOE-205ENST00000485628 ORMDL3Q8N138 153 aa10.96□□□□□ -0.65
APOE-205ENST00000485628 ZNRF2Q8NHG8 242 aa10.96□□□□□ -0.65
APOE-205ENST00000485628 LAMTOR2Q9Y2Q5 125 aa10.96□□□□□ -0.65
APOE-205ENST00000485628 KLK5Q9Y337 293 aaPredicted RBP10.96□□□□□ -0.65
APOE-205ENST00000485628 TRAPPC1Q9Y5R8 145 aa10.96□□□□□ -0.65
APOE-205ENST00000485628 TENM2Q9NT68 2774 aa10.96□□□□□ -0.66
APOE-205ENST00000485628 TNFRSF6BO95407 300 aa10.95□□□□□ -0.66
APOE-205ENST00000485628 NCR2O95944 276 aa10.95□□□□□ -0.66
APOE-205ENST00000485628 PPP1R17O96001 155 aa10.95□□□□□ -0.66
APOE-205ENST00000485628 NPYP01303 97 aa10.95□□□□□ -0.66
APOE-205ENST00000485628 TIRAPP58753 221 aa10.95□□□□□ -0.66
APOE-205ENST00000485628 RPL36AP83881 106 aaKnown RBP10.95□□□□□ -0.66
APOE-205ENST00000485628 KIAA1644Q3SXP7 199 aa10.95□□□□□ -0.66
APOE-205ENST00000485628 CASC10Q5T4H9 136 aa10.95□□□□□ -0.66
APOE-205ENST00000485628 SH2D6Q7Z4S9 175 aa10.95□□□□□ -0.66
APOE-205ENST00000485628 RPL36ALQ969Q0 106 aaKnown RBP10.95□□□□□ -0.66
APOE-205ENST00000485628 C20orf78Q9BR46 151 aa10.95□□□□□ -0.66
APOE-205ENST00000485628 ALKBH7Q9BT30 221 aaPredicted RBP10.95□□□□□ -0.66
APOE-205ENST00000485628 ICOSQ9Y6W8 199 aa10.95□□□□□ -0.66
APOE-205ENST00000485628 GAGE12JA6NER3 117 aa10.94□□□□□ -0.66
APOE-205ENST00000485628 FABP9Q0Z7S8 132 aa10.94□□□□□ -0.66
APOE-205ENST00000485628 GAGE1Q13065 139 aa10.94□□□□□ -0.66
APOE-205ENST00000485628 GAGE4Q13068 117 aa10.94□□□□□ -0.66
APOE-205ENST00000485628 GAGE5Q13069 117 aa10.94□□□□□ -0.66
APOE-205ENST00000485628 GAGE13Q4V321 117 aa10.94□□□□□ -0.66
APOE-205ENST00000485628 ZFAND6Q6FIF0 208 aa10.94□□□□□ -0.66
APOE-205ENST00000485628 PRELID3AQ96N28 172 aa10.94□□□□□ -0.66
APOE-205ENST00000485628 TMEM70Q9BUB7 260 aa10.94□□□□□ -0.66
APOE-205ENST00000485628 IGLV2-18A0A075B6J9 118 aa10.93□□□□□ -0.66
APOE-205ENST00000485628 TRBV27A0A0K0K1C4 114 aa10.93□□□□□ -0.66
APOE-205ENST00000485628 OR10J3Q5JRS4 329 aa10.93□□□□□ -0.66
APOE-205ENST00000485628 NEGR1Q7Z3B1 354 aa10.93□□□□□ -0.66
APOE-205ENST00000485628 TNFRSF18Q9Y5U5 241 aa10.93□□□□□ -0.66
APOE-205ENST00000485628 SDHAF1A6NFY7 115 aa10.92□□□□□ -0.66
APOE-205ENST00000485628 TRGC2P03986 189 aa10.92□□□□□ -0.66
APOE-205ENST00000485628 SUMO2P61956 95 aaKnown RBP10.92□□□□□ -0.66
APOE-205ENST00000485628 LYPD5Q6UWN5 251 aa10.92□□□□□ -0.66
APOE-205ENST00000485628 DAZ4Q86SG3 579 aaKnown RBP10.92□□□□□ -0.66
APOE-205ENST00000485628 ATP6V0E2Q8NHE4 81 aa10.92□□□□□ -0.66
APOE-205ENST00000485628 DAZ3Q9NR90 486 aaKnown RBP10.92□□□□□ -0.66
APOE-205ENST00000485628 SRIP30626 198 aa10.91□□□□□ -0.66
APOE-205ENST00000485628 ESRGQ1W209 222 aa10.91□□□□□ -0.66
APOE-205ENST00000485628 NTM-AS1Q6ZSK4 140 aa10.91□□□□□ -0.66
APOE-205ENST00000485628 GTSF1LQ9H1H1 148 aa10.91□□□□□ -0.66
APOE-205ENST00000485628 ST20Q9HBF5 79 aa10.91□□□□□ -0.66
APOE-205ENST00000485628 NUDT3O95989 172 aa10.9□□□□□ -0.66
APOE-205ENST00000485628 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
APOE-205ENST00000485628 VCYO14598 125 aa10.88□□□□□ -0.67
APOE-205ENST00000485628 SMIM2Q9BVW6 85 aa10.88□□□□□ -0.67
APOE-205ENST00000485628 IGHV3-38A0A0C4DH36 116 aa10.87□□□□□ -0.67
APOE-205ENST00000485628 I3L3M4 83 aa10.87□□□□□ -0.67
APOE-205ENST00000485628 TSHBP01222 138 aa10.87□□□□□ -0.67
APOE-205ENST00000485628 C18orf32Q8TCD1 76 aa10.87□□□□□ -0.67
APOE-205ENST00000485628 LINC00588Q9Y4M8 146 aa10.87□□□□□ -0.67
APOE-205ENST00000485628 VPS13DQ5THJ4 4388 aa10.87□□□□□ -0.67
APOE-205ENST00000485628 IQCJQ1A5X6 159 aa10.86□□□□□ -0.67
APOE-205ENST00000485628 Q8N8P6 123 aa10.86□□□□□ -0.67
APOE-205ENST00000485628 URB1-AS1Q96HZ7 61 aa10.86□□□□□ -0.67
APOE-205ENST00000485628 UPK3BQ9BT76 320 aa10.86□□□□□ -0.67
APOE-205ENST00000485628 LYSTQ99698 3801 aa10.85□□□□□ -0.67
APOE-205ENST00000485628 TRBV6-8A0A0A6YYG3 113 aa10.85□□□□□ -0.67
APOE-205ENST00000485628 ESDP10768 282 aa10.85□□□□□ -0.67
APOE-205ENST00000485628 TMEM97Q5BJF2 176 aa10.85□□□□□ -0.67
APOE-205ENST00000485628 LELP1Q5T871 98 aa10.85□□□□□ -0.67
APOE-205ENST00000485628 MAP1LC3AQ9H492 121 aa10.85□□□□□ -0.67
APOE-205ENST00000485628 MRPS16Q9Y3D3 137 aaKnown RBP10.85□□□□□ -0.67
APOE-205ENST00000485628 Q0VG73 95 aa10.84□□□□□ -0.67
APOE-205ENST00000485628 CHCHD7Q9BUK0 85 aa10.84□□□□□ -0.67
APOE-205ENST00000485628 NXT2Q9NPJ8 142 aaKnown RBP10.84□□□□□ -0.67
APOE-205ENST00000485628 K7EMI3 77 aa10.83□□□□□ -0.68
APOE-205ENST00000485628 PMCHP20382 165 aa10.83□□□□□ -0.68
APOE-205ENST00000485628 IFI27P40305 119 aaPredicted RBP10.83□□□□□ -0.68
APOE-205ENST00000485628 COTL1Q14019 142 aa10.83□□□□□ -0.68
APOE-205ENST00000485628 DNAH1Q9P2D7 4330 aa10.83□□□□□ -0.68
APOE-205ENST00000485628 TCAPO15273 167 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms