RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 TTTY13Q9BZ97 58 aa10.78□□□□□ -0.68
NPHP4-208ENST00000478423 ATG2AQ2TAZ0 1938 aa10.78□□□□□ -0.68
NPHP4-208ENST00000478423 NPSP0C0P6 89 aa10.78□□□□□ -0.68
NPHP4-208ENST00000478423 Q6ZQT7 251 aa10.78□□□□□ -0.68
NPHP4-208ENST00000478423 C5orf38Q86SI9 138 aa10.78□□□□□ -0.68
NPHP4-208ENST00000478423 DNAJC30Q96LL9 226 aa10.78□□□□□ -0.68
NPHP4-208ENST00000478423 TRBV20-1A0A075B6N2 111 aa10.78□□□□□ -0.68
NPHP4-208ENST00000478423 Q8N6K4 173 aa10.77□□□□□ -0.68
NPHP4-208ENST00000478423 GDF5OSQ5U4N7 250 aa10.77□□□□□ -0.69
NPHP4-208ENST00000478423 Q6ZVH6 145 aa10.77□□□□□ -0.69
NPHP4-208ENST00000478423 MBD6Q96DN6 1003 aa10.77□□□□□ -0.69
NPHP4-208ENST00000478423 K7EQG2 157 aa10.77□□□□□ -0.69
NPHP4-208ENST00000478423 ATP6V0E2Q8NHE4 81 aa10.77□□□□□ -0.69
NPHP4-208ENST00000478423 Q9H8V8 135 aa10.77□□□□□ -0.69
NPHP4-208ENST00000478423 DEFB135Q30KP9 77 aa10.76□□□□□ -0.69
NPHP4-208ENST00000478423 MAP6D1Q9H9H5 199 aa10.76□□□□□ -0.69
NPHP4-208ENST00000478423 K7EQD1 137 aa10.76□□□□□ -0.69
NPHP4-208ENST00000478423 SPART-AS1P0CW21 52 aa10.76□□□□□ -0.69
NPHP4-208ENST00000478423 AMTNQ6UX39 209 aa10.76□□□□□ -0.69
NPHP4-208ENST00000478423 ATP5G1P05496 136 aa10.76□□□□□ -0.69
NPHP4-208ENST00000478423 H3BMM0 161 aa10.76□□□□□ -0.69
NPHP4-208ENST00000478423 UBE2WQ96B02 151 aa10.76□□□□□ -0.69
NPHP4-208ENST00000478423 TRBV7-3A0A075B6L6 115 aa10.75□□□□□ -0.69
NPHP4-208ENST00000478423 C12orf74Q32Q52 190 aa10.75□□□□□ -0.69
NPHP4-208ENST00000478423 COL5A1P20908 1838 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-208ENST00000478423 A0A1W2PPR1 153 aa10.75□□□□□ -0.69
NPHP4-208ENST00000478423 CRLF1O75462 422 aa10.75□□□□□ -0.69
NPHP4-208ENST00000478423 IGLC6P0CF74 106 aa10.75□□□□□ -0.69
NPHP4-208ENST00000478423 OCIAD2Q56VL3 154 aa10.75□□□□□ -0.69
NPHP4-208ENST00000478423 LURAP1LQ8IV03 231 aa10.75□□□□□ -0.69
NPHP4-208ENST00000478423 OVOL2Q9BRP0 275 aa10.75□□□□□ -0.69
NPHP4-208ENST00000478423 HTTP42858 3142 aa10.75□□□□□ -0.69
NPHP4-208ENST00000478423 A0A1W2PPM0 123 aa10.74□□□□□ -0.69
NPHP4-208ENST00000478423 DEFB4AO15263 64 aa10.74□□□□□ -0.69
NPHP4-208ENST00000478423 H3BMG7 143 aa10.74□□□□□ -0.69
NPHP4-208ENST00000478423 GAGE2BQ13066 116 aa10.74□□□□□ -0.69
NPHP4-208ENST00000478423 DAZ2Q13117 558 aaKnown RBP10.74□□□□□ -0.69
NPHP4-208ENST00000478423 GAGE2EQ4V326 116 aa10.74□□□□□ -0.69
NPHP4-208ENST00000478423 Q6ZSV7 163 aa10.74□□□□□ -0.69
NPHP4-208ENST00000478423 DAZ4Q86SG3 579 aaKnown RBP10.74□□□□□ -0.69
NPHP4-208ENST00000478423 DAZ3Q9NR90 486 aaKnown RBP10.74□□□□□ -0.69
NPHP4-208ENST00000478423 GAGE2DQ9UEU5 116 aa10.74□□□□□ -0.69
NPHP4-208ENST00000478423 SMAD5-AS1Q9Y6J3 95 aa10.74□□□□□ -0.69
NPHP4-208ENST00000478423 GTSF1LQ9H1H1 148 aa10.74□□□□□ -0.69
NPHP4-208ENST00000478423 ANKRD17O75179 2603 aaKnown RBP10.73□□□□□ -0.69
NPHP4-208ENST00000478423 CRIP1P50238 77 aa10.73□□□□□ -0.69
NPHP4-208ENST00000478423 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
NPHP4-208ENST00000478423 C20orf173Q96LM9 149 aa10.73□□□□□ -0.69
NPHP4-208ENST00000478423 ZMAT4Q9H898 229 aa10.73□□□□□ -0.69
NPHP4-208ENST00000478423 IGLV10-54A0A075B6I4 117 aa10.72□□□□□ -0.69
NPHP4-208ENST00000478423 Q6ZS46 218 aa10.72□□□□□ -0.69
NPHP4-208ENST00000478423 LGALS9O00182 355 aa10.72□□□□□ -0.69
NPHP4-208ENST00000478423 DEFB114Q30KQ6 69 aa10.72□□□□□ -0.69
NPHP4-208ENST00000478423 TP53TG3Q9ULZ0 132 aa10.72□□□□□ -0.69
NPHP4-208ENST00000478423 DEFB125Q8N687 156 aa10.72□□□□□ -0.69
NPHP4-208ENST00000478423 SLC25A29Q8N8R3 303 aa10.72□□□□□ -0.69
NPHP4-208ENST00000478423 K7EP13 123 aa10.72□□□□□ -0.69
NPHP4-208ENST00000478423 K7EP34 96 aa10.72□□□□□ -0.69
NPHP4-208ENST00000478423 BAALCQ8WXS3 180 aa10.72□□□□□ -0.69
NPHP4-208ENST00000478423 ODF1Q14990 250 aa10.71□□□□□ -0.69
NPHP4-208ENST00000478423 TIMM17AQ99595 171 aa10.71□□□□□ -0.69
NPHP4-208ENST00000478423 HHLA3Q9XRX5 114 aa10.71□□□□□ -0.69
NPHP4-208ENST00000478423 EXPH5Q8NEV8 1989 aa10.71□□□□□ -0.69
NPHP4-208ENST00000478423 ZFAND2AQ8N6M9 145 aa10.71□□□□□ -0.7
NPHP4-208ENST00000478423 TMEM263Q8WUH6 116 aaKnown RBP10.71□□□□□ -0.7
NPHP4-208ENST00000478423 Q9HAA7 133 aa10.71□□□□□ -0.7
NPHP4-208ENST00000478423 IGKV2D-24A0A075B6R9 120 aa10.7□□□□□ -0.7
NPHP4-208ENST00000478423 AVPP01185 164 aa10.7□□□□□ -0.7
NPHP4-208ENST00000478423 TOMM6Q96B49 74 aa10.7□□□□□ -0.7
NPHP4-208ENST00000478423 SCRT2Q9NQ03 307 aa10.7□□□□□ -0.7
NPHP4-208ENST00000478423 INSL3P51460 131 aa10.7□□□□□ -0.7
NPHP4-208ENST00000478423 C20orf203Q8NBC4 194 aa10.7□□□□□ -0.7
NPHP4-208ENST00000478423 C11orf86A6NJI1 115 aa10.7□□□□□ -0.7
NPHP4-208ENST00000478423 PSMB8P28062 276 aa10.7□□□□□ -0.7
NPHP4-208ENST00000478423 INAFM1C9JVW0 142 aa10.7□□□□□ -0.7
NPHP4-208ENST00000478423 HIST2H2BDQ6DRA6 164 aa10.7□□□□□ -0.7
NPHP4-208ENST00000478423 TRAV12-1A0A0B4J245 112 aa10.69□□□□□ -0.7
NPHP4-208ENST00000478423 CFC1BP0CG36 223 aa10.69□□□□□ -0.7
NPHP4-208ENST00000478423 CFC1P0CG37 223 aa10.69□□□□□ -0.7
NPHP4-208ENST00000478423 GAGE2AQ6NT46 116 aa10.69□□□□□ -0.7
NPHP4-208ENST00000478423 NKAPP1Q8N9T2 125 aa10.69□□□□□ -0.7
NPHP4-208ENST00000478423 BOD1L2Q8IYS8 172 aa10.69□□□□□ -0.7
NPHP4-208ENST00000478423 OPRPNQ99935 248 aaPredicted RBP10.69□□□□□ -0.7
NPHP4-208ENST00000478423 CPAMD8Q8IZJ3 1885 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 TRAV13-2A0A0B4J235 113 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 CCL25O15444 150 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 IGLV2-11P01706 119 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 ANAPC13Q9BS18 74 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 F8W1H4 67 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 ICOSQ9Y6W8 199 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 P0DMU3 169 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 FAM231AP0DMU4 169 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 FAM231CP0DMU5 169 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 Q6ZTI0 123 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 ODF3Q96PU9 254 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 C1orf43Q9BWL3 253 aa10.68□□□□□ -0.7
NPHP4-208ENST00000478423 HIST1H4AP62805 103 aaKnown RBP10.67□□□□□ -0.7
NPHP4-208ENST00000478423 YPEL4Q96NS1 127 aa10.67□□□□□ -0.7
NPHP4-208ENST00000478423 EDA2RQ9HAV5 297 aa10.67□□□□□ -0.7
NPHP4-208ENST00000478423 FXYD2P54710 66 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms