RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 F2Z2F3 143 aa14.11□□□□□ -0.15
LIME1-204ENST00000476183 TOR2AQ5JU69 321 aa14.11□□□□□ -0.15
LIME1-204ENST00000476183 CDPF1Q6NVV7 123 aa14.1□□□□□ -0.15
LIME1-204ENST00000476183 KRTAP4-5Q9BYR2 181 aa14.1□□□□□ -0.15
LIME1-204ENST00000476183 RPP21Q9H633 154 aaKnown RBP14.1□□□□□ -0.15
LIME1-204ENST00000476183 MGPP08493 103 aa14.09□□□□□ -0.15
LIME1-204ENST00000476183 CTRLP40313 264 aa14.09□□□□□ -0.15
LIME1-204ENST00000476183 DNAJC30Q96LL9 226 aa14.09□□□□□ -0.15
LIME1-204ENST00000476183 TRBV6-8A0A0A6YYG3 113 aa14.08□□□□□ -0.16
LIME1-204ENST00000476183 M0QY20 66 aa14.08□□□□□ -0.16
LIME1-204ENST00000476183 NTF3P20783 257 aa14.08□□□□□ -0.16
LIME1-204ENST00000476183 CEBPGP53567 150 aa14.08□□□□□ -0.16
LIME1-204ENST00000476183 URGCP-MRPS24S4R325 110 aa14.08□□□□□ -0.16
LIME1-204ENST00000476183 TRAV8-3A0A0A6YYJ7 113 aa14.07□□□□□ -0.16
LIME1-204ENST00000476183 SUMO4Q6EEV6 95 aa14.07□□□□□ -0.16
LIME1-204ENST00000476183 NTM-AS1Q6ZSK4 140 aa14.07□□□□□ -0.16
LIME1-204ENST00000476183 FAM210AQ96ND0 272 aa14.07□□□□□ -0.16
LIME1-204ENST00000476183 EIF5A2Q9GZV4 153 aaKnown RBP14.07□□□□□ -0.16
LIME1-204ENST00000476183 KLK12Q9UKR0 248 aa14.07□□□□□ -0.16
LIME1-204ENST00000476183 KRTAP10-1P60331 282 aa14.06□□□□□ -0.16
LIME1-204ENST00000476183 WFDC2Q14508 124 aa14.06□□□□□ -0.16
LIME1-204ENST00000476183 WDR73Q6P4I2 378 aa14.06□□□□□ -0.16
LIME1-204ENST00000476183 GTSF1Q8WW33 167 aa14.06□□□□□ -0.16
LIME1-204ENST00000476183 TM2D2Q9BX73 214 aa14.06□□□□□ -0.16
LIME1-204ENST00000476183 CNFNQ9BYD5 112 aa14.06□□□□□ -0.16
LIME1-204ENST00000476183 A0A087WX48 190 aa14.05□□□□□ -0.16
LIME1-204ENST00000476183 TRGC1P0CF51 173 aa14.05□□□□□ -0.16
LIME1-204ENST00000476183 MAPKAPK5-AS1Q8N8E1 139 aa14.05□□□□□ -0.16
LIME1-204ENST00000476183 CHCHD7Q9BUK0 85 aa14.05□□□□□ -0.16
LIME1-204ENST00000476183 DNAH8Q96JB1 4490 aa14.05□□□□□ -0.16
LIME1-204ENST00000476183 NDUFS6O75380 124 aaKnown RBP14.04□□□□□ -0.16
LIME1-204ENST00000476183 FAM231DQ6ZW35 169 aa14.04□□□□□ -0.16
LIME1-204ENST00000476183 Q8N814 137 aa14.04□□□□□ -0.16
LIME1-204ENST00000476183 DPH3P1Q9H4G8 78 aa14.04□□□□□ -0.16
LIME1-204ENST00000476183 GATCO43716 136 aaKnown RBP14.03□□□□□ -0.16
LIME1-204ENST00000476183 SRP19P09132 144 aaKnown RBP14.03□□□□□ -0.16
LIME1-204ENST00000476183 TWIST1Q15672 202 aa14.03□□□□□ -0.16
LIME1-204ENST00000476183 SMIM7Q9BQ49 75 aa14.03□□□□□ -0.16
LIME1-204ENST00000476183 TMEM262E9PQX1 116 aa14.02□□□□□ -0.17
LIME1-204ENST00000476183 H7C1H1 209 aa14.02□□□□□ -0.17
LIME1-204ENST00000476183 MPV17L2Q567V2 206 aa14.02□□□□□ -0.17
LIME1-204ENST00000476183 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.02□□□□□ -0.17
LIME1-204ENST00000476183 UBE2WQ96B02 151 aa14.02□□□□□ -0.17
LIME1-204ENST00000476183 KCNIP4Q6PIL6 250 aa14.01□□□□□ -0.17
LIME1-204ENST00000476183 RASL11AQ6T310 242 aa14.01□□□□□ -0.17
LIME1-204ENST00000476183 LINC01551Q86U37 167 aa14.01□□□□□ -0.17
LIME1-204ENST00000476183 CHCHD5Q9BSY4 110 aa14.01□□□□□ -0.17
LIME1-204ENST00000476183 FAT1Q14517 4588 aa14.01□□□□□ -0.17
LIME1-204ENST00000476183 IGLV5-52A0A0A0MRZ9 124 aa14□□□□□ -0.17
LIME1-204ENST00000476183 LECT2O14960 151 aa14□□□□□ -0.17
LIME1-204ENST00000476183 GCSHP23434 173 aa14□□□□□ -0.17
LIME1-204ENST00000476183 ELOBQ15370 118 aa14□□□□□ -0.17
LIME1-204ENST00000476183 TMEM97Q5BJF2 176 aa14□□□□□ -0.17
LIME1-204ENST00000476183 NTN5Q8WTR8 489 aaPredicted RBP14□□□□□ -0.17
LIME1-204ENST00000476183 IGKV2D-24A0A075B6R9 120 aa13.99□□□□□ -0.17
LIME1-204ENST00000476183 ZNF727A8MUV8 499 aa13.99□□□□□ -0.17
LIME1-204ENST00000476183 FOXA3P55318 350 aaPredicted RBP13.99□□□□□ -0.17
LIME1-204ENST00000476183 XGP55808 180 aa13.99□□□□□ -0.17
LIME1-204ENST00000476183 C15orf54Q8N8G6 183 aa13.99□□□□□ -0.17
LIME1-204ENST00000476183 BAALCQ8WXS3 180 aa13.99□□□□□ -0.17
LIME1-204ENST00000476183 A8MWL6 223 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 CT83Q5H943 113 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 ATRAIDQ6UW56 229 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 TEX261Q6UWH6 196 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 ENHOQ6UWT2 76 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 Q8N1X5 172 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 Q8N976 141 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 RMI2Q96E14 147 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 PGLYRP4Q96LB8 373 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 NIT2Q9NQR4 276 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 COX11Q9Y6N1 276 aa13.98□□□□□ -0.17
LIME1-204ENST00000476183 C9JQL5 133 aa13.97□□□□□ -0.17
LIME1-204ENST00000476183 GAGE6Q13070 117 aa13.97□□□□□ -0.17
LIME1-204ENST00000476183 IQCJQ1A5X6 159 aa13.97□□□□□ -0.17
LIME1-204ENST00000476183 TRBV25-1A0A075B6N4 114 aa13.96□□□□□ -0.17
LIME1-204ENST00000476183 TRAV26-2A0A0B4J265 109 aa13.96□□□□□ -0.17
LIME1-204ENST00000476183 GATD1Q8NB37 220 aa13.96□□□□□ -0.17
LIME1-204ENST00000476183 DEFB104AQ8WTQ1 72 aa13.96□□□□□ -0.17
LIME1-204ENST00000476183 IGHV1-24A0A0C4DH33 117 aa13.95□□□□□ -0.18
LIME1-204ENST00000476183 ANGP03950 147 aaKnown RBP13.95□□□□□ -0.18
LIME1-204ENST00000476183 PKIAP61925 76 aa13.95□□□□□ -0.18
LIME1-204ENST00000476183 RBX1P62877 108 aa13.95□□□□□ -0.18
LIME1-204ENST00000476183 SRSF3P84103 164 aaKnown RBP13.95□□□□□ -0.18
LIME1-204ENST00000476183 Q0VG73 95 aa13.95□□□□□ -0.18
LIME1-204ENST00000476183 OSTCQ9NRP0 149 aa13.94□□□□□ -0.18
LIME1-204ENST00000476183 TSKUQ8WUA8 353 aa13.93□□□□□ -0.18
LIME1-204ENST00000476183 CRPP02741 224 aa13.92□□□□□ -0.18
LIME1-204ENST00000476183 RPL39LQ96EH5 51 aaKnown RBP13.92□□□□□ -0.18
LIME1-204ENST00000476183 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.91□□□□□ -0.18
LIME1-204ENST00000476183 HIGD1CA8MV81 97 aa13.91□□□□□ -0.18
LIME1-204ENST00000476183 TMEM241Q24JQ0 296 aa13.91□□□□□ -0.18
LIME1-204ENST00000476183 SMIM15Q7Z3B0 74 aa13.91□□□□□ -0.18
LIME1-204ENST00000476183 ISOC2Q96AB3 205 aa13.91□□□□□ -0.18
LIME1-204ENST00000476183 C1orf43Q9BWL3 253 aa13.91□□□□□ -0.18
LIME1-204ENST00000476183 GFRA4Q9GZZ7 299 aa13.91□□□□□ -0.18
LIME1-204ENST00000476183 PRR34Q9NV39 138 aa13.91□□□□□ -0.18
LIME1-204ENST00000476183 V9GYV3 84 aa13.91□□□□□ -0.18
LIME1-204ENST00000476183 RPL23P62829 140 aaKnown RBP13.9□□□□□ -0.18
LIME1-204ENST00000476183 HAMPP81172 84 aa13.9□□□□□ -0.18
LIME1-204ENST00000476183 FAM74A3Q4VXF1 159 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms