RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 M0QY20 66 aa11.79□□□□□ -0.52
CCM2-205ENST00000472223 GAGE1Q13065 139 aa11.79□□□□□ -0.52
CCM2-205ENST00000472223 GAGE4Q13068 117 aa11.79□□□□□ -0.52
CCM2-205ENST00000472223 GAGE5Q13069 117 aa11.79□□□□□ -0.52
CCM2-205ENST00000472223 MRPL51Q4U2R6 128 aaKnown RBP11.79□□□□□ -0.52
CCM2-205ENST00000472223 GAGE13Q4V321 117 aa11.79□□□□□ -0.52
CCM2-205ENST00000472223 TMEM136Q6ZRR5 245 aa11.79□□□□□ -0.52
CCM2-205ENST00000472223 ZNRF2Q8NHG8 242 aa11.79□□□□□ -0.52
CCM2-205ENST00000472223 TRAV26-2A0A0B4J265 109 aa11.78□□□□□ -0.52
CCM2-205ENST00000472223 OR10J3Q5JRS4 329 aa11.78□□□□□ -0.52
CCM2-205ENST00000472223 NEGR1Q7Z3B1 354 aa11.78□□□□□ -0.52
CCM2-205ENST00000472223 ORMDL3Q8N138 153 aa11.78□□□□□ -0.52
CCM2-205ENST00000472223 RNF185Q96GF1 192 aa11.78□□□□□ -0.52
CCM2-205ENST00000472223 TRAPPC1Q9Y5R8 145 aa11.78□□□□□ -0.52
CCM2-205ENST00000472223 FABP9Q0Z7S8 132 aa11.77□□□□□ -0.53
CCM2-205ENST00000472223 ATP6V0E2Q8NHE4 81 aa11.77□□□□□ -0.53
CCM2-205ENST00000472223 ST20Q9HBF5 79 aa11.77□□□□□ -0.53
CCM2-205ENST00000472223 A0A096LPF7 62 aa11.76□□□□□ -0.53
CCM2-205ENST00000472223 LOC100131303A0A0U1RQF7 123 aa11.76□□□□□ -0.53
CCM2-205ENST00000472223 D6R8Y8 96 aa11.76□□□□□ -0.53
CCM2-205ENST00000472223 SCO1O75880 301 aa11.76□□□□□ -0.53
CCM2-205ENST00000472223 P0DMU3 169 aa11.76□□□□□ -0.53
CCM2-205ENST00000472223 FAM231AP0DMU4 169 aa11.76□□□□□ -0.53
CCM2-205ENST00000472223 FAM231CP0DMU5 169 aa11.76□□□□□ -0.53
CCM2-205ENST00000472223 CASC10Q5T4H9 136 aa11.76□□□□□ -0.53
CCM2-205ENST00000472223 NEXN-AS1Q8NBZ9 246 aa11.76□□□□□ -0.53
CCM2-205ENST00000472223 MRPL18Q9H0U6 180 aaKnown RBP11.76□□□□□ -0.53
CCM2-205ENST00000472223 CCL18P55774 89 aa11.75□□□□□ -0.53
CCM2-205ENST00000472223 DAZ4Q86SG3 579 aaKnown RBP11.75□□□□□ -0.53
CCM2-205ENST00000472223 DAZ3Q9NR90 486 aaKnown RBP11.75□□□□□ -0.53
CCM2-205ENST00000472223 APLNQ9ULZ1 77 aa11.75□□□□□ -0.53
CCM2-205ENST00000472223 LAMTOR2Q9Y2Q5 125 aa11.75□□□□□ -0.53
CCM2-205ENST00000472223 NCR2O95944 276 aa11.74□□□□□ -0.53
CCM2-205ENST00000472223 RPS10P46783 165 aaKnown RBP11.74□□□□□ -0.53
CCM2-205ENST00000472223 TMEM97Q5BJF2 176 aa11.74□□□□□ -0.53
CCM2-205ENST00000472223 PRELID3AQ96N28 172 aa11.74□□□□□ -0.53
CCM2-205ENST00000472223 YPEL4Q96NS1 127 aa11.74□□□□□ -0.53
CCM2-205ENST00000472223 SMKR1H3BMG3 65 aa11.73□□□□□ -0.53
CCM2-205ENST00000472223 PHOX2AO14813 284 aa11.73□□□□□ -0.53
CCM2-205ENST00000472223 UBE2DNLQ8IWF7 75 aa11.73□□□□□ -0.53
CCM2-205ENST00000472223 RPL39LQ96EH5 51 aaKnown RBP11.73□□□□□ -0.53
CCM2-205ENST00000472223 TNFRSF6BO95407 300 aa11.72□□□□□ -0.53
CCM2-205ENST00000472223 PMCHP20382 165 aa11.72□□□□□ -0.53
CCM2-205ENST00000472223 UBE2D3P61077 147 aa11.72□□□□□ -0.53
CCM2-205ENST00000472223 UBE2D2P62837 147 aa11.72□□□□□ -0.53
CCM2-205ENST00000472223 C20orf78Q9BR46 151 aa11.72□□□□□ -0.53
CCM2-205ENST00000472223 GTSF1LQ9H1H1 148 aa11.72□□□□□ -0.53
CCM2-205ENST00000472223 DNAH7Q8WXX0 4024 aa11.72□□□□□ -0.53
CCM2-205ENST00000472223 TRBV6-5A0A0K0K1A5 114 aa11.71□□□□□ -0.53
CCM2-205ENST00000472223 VCYO14598 125 aa11.71□□□□□ -0.53
CCM2-205ENST00000472223 RAB5AP20339 215 aa11.71□□□□□ -0.53
CCM2-205ENST00000472223 KIAA1644Q3SXP7 199 aa11.71□□□□□ -0.53
CCM2-205ENST00000472223 MAP1LC3AQ9H492 121 aa11.71□□□□□ -0.53
CCM2-205ENST00000472223 SDHAF1A6NFY7 115 aa11.7□□□□□ -0.54
CCM2-205ENST00000472223 COLCA2A8K830 154 aa11.7□□□□□ -0.54
CCM2-205ENST00000472223 SUMO2P61956 95 aaKnown RBP11.7□□□□□ -0.54
CCM2-205ENST00000472223 LYPD5Q6UWN5 251 aa11.7□□□□□ -0.54
CCM2-205ENST00000472223 Q9UF83 564 aa11.7□□□□□ -0.54
CCM2-205ENST00000472223 TRAV8-6A0A0B4J262 113 aa11.69□□□□□ -0.54
CCM2-205ENST00000472223 I3L3M4 83 aa11.69□□□□□ -0.54
CCM2-205ENST00000472223 COTL1Q14019 142 aa11.69□□□□□ -0.54
CCM2-205ENST00000472223 NRACQ8N912 160 aa11.69□□□□□ -0.54
CCM2-205ENST00000472223 KIR2DL4Q99706 377 aa11.69□□□□□ -0.54
CCM2-205ENST00000472223 IGHV3-38A0A0C4DH36 116 aa11.68□□□□□ -0.54
CCM2-205ENST00000472223 TCAPO15273 167 aa11.68□□□□□ -0.54
CCM2-205ENST00000472223 NPYP01303 97 aa11.68□□□□□ -0.54
CCM2-205ENST00000472223 LINC00694P0DN24 101 aa11.68□□□□□ -0.54
CCM2-205ENST00000472223 TIRAPP58753 221 aa11.68□□□□□ -0.54
CCM2-205ENST00000472223 GAS8-AS1O95177 125 aa11.67□□□□□ -0.54
CCM2-205ENST00000472223 FCER1GP30273 86 aa11.67□□□□□ -0.54
CCM2-205ENST00000472223 ESRGQ1W209 222 aa11.67□□□□□ -0.54
CCM2-205ENST00000472223 TMEM70Q9BUB7 260 aa11.67□□□□□ -0.54
CCM2-205ENST00000472223 TRBV25-1A0A075B6N4 114 aa11.66□□□□□ -0.54
CCM2-205ENST00000472223 LOC389332A0A1B0GUA5 103 aa11.66□□□□□ -0.54
CCM2-205ENST00000472223 LELP1Q5T871 98 aa11.66□□□□□ -0.54
CCM2-205ENST00000472223 ALKBH7Q9BT30 221 aaPredicted RBP11.66□□□□□ -0.54
CCM2-205ENST00000472223 TRBV27A0A0K0K1C4 114 aa11.65□□□□□ -0.54
CCM2-205ENST00000472223 TRGC2P03986 189 aa11.65□□□□□ -0.54
CCM2-205ENST00000472223 POLR2KP53803 58 aaKnown RBP11.65□□□□□ -0.54
CCM2-205ENST00000472223 RPL32P62910 135 aaKnown RBP11.65□□□□□ -0.54
CCM2-205ENST00000472223 PRSS3P2Q8NHM4 247 aa11.65□□□□□ -0.54
CCM2-205ENST00000472223 SMIM2Q9BVW6 85 aa11.65□□□□□ -0.54
CCM2-205ENST00000472223 NXT2Q9NPJ8 142 aaKnown RBP11.65□□□□□ -0.54
CCM2-205ENST00000472223 TRBV6-8A0A0A6YYG3 113 aa11.64□□□□□ -0.55
CCM2-205ENST00000472223 IGHV1-24A0A0C4DH33 117 aa11.64□□□□□ -0.55
CCM2-205ENST00000472223 AMTP48728 403 aa11.64□□□□□ -0.55
CCM2-205ENST00000472223 PKIAP61925 76 aa11.64□□□□□ -0.55
CCM2-205ENST00000472223 LGALS9CQ6DKI2 356 aa11.64□□□□□ -0.55
CCM2-205ENST00000472223 MRPS16Q9Y3D3 137 aaKnown RBP11.64□□□□□ -0.55
CCM2-205ENST00000472223 PRSS47A8MTI9 375 aa11.63□□□□□ -0.55
CCM2-205ENST00000472223 UBE2L6O14933 153 aa11.63□□□□□ -0.55
CCM2-205ENST00000472223 LINC00588Q9Y4M8 146 aa11.63□□□□□ -0.55
CCM2-205ENST00000472223 LY6G6CO95867 125 aa11.62□□□□□ -0.55
CCM2-205ENST00000472223 RAB5BP61020 215 aa11.62□□□□□ -0.55
CCM2-205ENST00000472223 Q8N8P6 123 aa11.62□□□□□ -0.55
CCM2-205ENST00000472223 CHCHD5Q9BSY4 110 aa11.62□□□□□ -0.55
CCM2-205ENST00000472223 TMEM243Q9BU79 118 aa11.62□□□□□ -0.55
CCM2-205ENST00000472223 TENM2Q9NT68 2774 aa11.62□□□□□ -0.55
CCM2-205ENST00000472223 DYNC2H1Q8NCM8 4307 aaKnown RBP11.61□□□□□ -0.55
CCM2-205ENST00000472223 CSMD3Q7Z407 3707 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms