RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 TRBV20OR9-2A0A075B6H5 130 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.95□□□□□ -1.46
USF1-204ENST00000472217 IGKV2D-24A0A075B6R9 120 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 RAB19A4D1S5 217 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 RBFOX3A6NFN3 312 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 F5H697 171 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 PDE6DO43924 150 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 C1QBP02746 253 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 INAFM2P0DMQ5 153 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 ELOBQ15370 118 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 KCNIP4Q6PIL6 250 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 OR2D3Q8NGH3 330 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 BAALCQ8WXS3 180 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 RMI2Q96E14 147 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 SMIM12Q96EX1 92 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 TPPP3Q9BW30 176 aa5.95□□□□□ -1.46
USF1-204ENST00000472217 TMEM262E9PQX1 116 aa5.94□□□□□ -1.46
USF1-204ENST00000472217 IFNA1P01562 189 aa5.94□□□□□ -1.46
USF1-204ENST00000472217 SMIM17P0DL12 118 aa5.94□□□□□ -1.46
USF1-204ENST00000472217 BCL2P10415 239 aa5.94□□□□□ -1.46
USF1-204ENST00000472217 MPV17L2Q567V2 206 aa5.94□□□□□ -1.46
USF1-204ENST00000472217 ATRAIDQ6UW56 229 aa5.94□□□□□ -1.46
USF1-204ENST00000472217 SLC51BQ86UW2 128 aa5.94□□□□□ -1.46
USF1-204ENST00000472217 FER1L6-AS1Q8NA97 138 aa5.94□□□□□ -1.46
USF1-204ENST00000472217 DAZAP1Q96EP5 407 aaKnown RBP5.94□□□□□ -1.46
USF1-204ENST00000472217 P01737 135 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 MGPP08493 103 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 RPS20P60866 119 aaKnown RBP5.93□□□□□ -1.46
USF1-204ENST00000472217 Q0VG73 95 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 LINC01620Q4KN68 170 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 ENHOQ6UWT2 76 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 Q6ZNX1 250 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 NTM-AS1Q6ZSK4 140 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 Q8N976 141 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.93□□□□□ -1.46
USF1-204ENST00000472217 CHCHD5Q9BSY4 110 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 MED9Q9NWA0 146 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 VAX2Q9UIW0 290 aa5.93□□□□□ -1.46
USF1-204ENST00000472217 XKRY2A2RUG3 117 aa5.92□□□□□ -1.46
USF1-204ENST00000472217 FAM229AH3BQW9 127 aa5.92□□□□□ -1.46
USF1-204ENST00000472217 M0QY20 66 aa5.92□□□□□ -1.46
USF1-204ENST00000472217 ANGP03950 147 aaKnown RBP5.92□□□□□ -1.46
USF1-204ENST00000472217 CACNG7P62955 275 aa5.92□□□□□ -1.46
USF1-204ENST00000472217 Q6ZSA8 131 aa5.92□□□□□ -1.46
USF1-204ENST00000472217 C9orf62Q8N4C0 152 aa5.92□□□□□ -1.46
USF1-204ENST00000472217 C15orf54Q8N8G6 183 aa5.92□□□□□ -1.46
USF1-204ENST00000472217 C1orf43Q9BWL3 253 aa5.92□□□□□ -1.46
USF1-204ENST00000472217 F2Z2F3 143 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 H7C1H1 209 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 CRPP02741 224 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 TAGLN2P37802 199 aaKnown RBP5.91□□□□□ -1.46
USF1-204ENST00000472217 PKIAP61925 76 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 TMEM97Q5BJF2 176 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 SUMO4Q6EEV6 95 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 LYZL1Q6UWQ5 148 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 AKAP14Q86UN6 197 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 NUDT10Q8NFP7 164 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 NUDT11Q96G61 164 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 BIN3Q9NQY0 253 aa5.91□□□□□ -1.46
USF1-204ENST00000472217 hCG_2014768A0A024R1R8 64 aa5.9□□□□□ -1.46
USF1-204ENST00000472217 TRBV25-1A0A075B6N4 114 aa5.9□□□□□ -1.46
USF1-204ENST00000472217 K7EN84 100 aa5.9□□□□□ -1.46
USF1-204ENST00000472217 TRGC1P0CF51 173 aa5.9□□□□□ -1.46
USF1-204ENST00000472217 NTF3P20783 257 aa5.9□□□□□ -1.46
USF1-204ENST00000472217 CTRLP40313 264 aa5.9□□□□□ -1.46
USF1-204ENST00000472217 NKX2-5P52952 324 aaPredicted RBP5.9□□□□□ -1.46
USF1-204ENST00000472217 RBX1P62877 108 aa5.9□□□□□ -1.46
USF1-204ENST00000472217 GAGE6Q13070 117 aa5.9□□□□□ -1.46
USF1-204ENST00000472217 IQCJQ1A5X6 159 aa5.9□□□□□ -1.46
USF1-204ENST00000472217 IGHV1-24A0A0C4DH33 117 aa5.89□□□□□ -1.47
USF1-204ENST00000472217 HLA-DQA1P01909 254 aa5.89□□□□□ -1.47
USF1-204ENST00000472217 MIAQ16674 131 aa5.89□□□□□ -1.47
USF1-204ENST00000472217 RASL11AQ6T310 242 aa5.89□□□□□ -1.47
USF1-204ENST00000472217 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
USF1-204ENST00000472217 ALKAL2Q6UX46 152 aa5.89□□□□□ -1.47
USF1-204ENST00000472217 OCC1Q8TAD7 63 aa5.89□□□□□ -1.47
USF1-204ENST00000472217 RNASE7Q9H1E1 156 aaKnown RBP5.89□□□□□ -1.47
USF1-204ENST00000472217 DPH3P1Q9H4G8 78 aa5.89□□□□□ -1.47
USF1-204ENST00000472217 RPP21Q9H633 154 aaKnown RBP5.89□□□□□ -1.47
USF1-204ENST00000472217 PRR34Q9NV39 138 aa5.89□□□□□ -1.47
USF1-204ENST00000472217 USP17L23D6RBM5 183 aa5.88□□□□□ -1.47
USF1-204ENST00000472217 C14orf177Q52M58 125 aa5.88□□□□□ -1.47
USF1-204ENST00000472217 WDR73Q6P4I2 378 aa5.88□□□□□ -1.47
USF1-204ENST00000472217 SCXQ7RTU7 201 aa5.88□□□□□ -1.47
USF1-204ENST00000472217 LINC00269Q8N2A0 174 aa5.88□□□□□ -1.47
USF1-204ENST00000472217 CNFNQ9BYD5 112 aa5.88□□□□□ -1.47
USF1-204ENST00000472217 NIT2Q9NQR4 276 aa5.88□□□□□ -1.47
USF1-204ENST00000472217 TMEM250H0YL14 139 aa5.87□□□□□ -1.47
USF1-204ENST00000472217 BLOC1S1P78537 153 aa5.87□□□□□ -1.47
USF1-204ENST00000472217 TWIST1Q15672 202 aa5.87□□□□□ -1.47
USF1-204ENST00000472217 LCE2AQ5TA79 106 aaPredicted RBP5.87□□□□□ -1.47
USF1-204ENST00000472217 KRTAP26-1Q6PEX3 210 aa5.87□□□□□ -1.47
USF1-204ENST00000472217 LYPD6BQ8NI32 183 aa5.87□□□□□ -1.47
USF1-204ENST00000472217 DEFB104AQ8WTQ1 72 aa5.87□□□□□ -1.47
USF1-204ENST00000472217 PGLYRP4Q96LB8 373 aa5.87□□□□□ -1.47
USF1-204ENST00000472217 IGLV4-60A0A075B6I1 120 aa5.86□□□□□ -1.47
USF1-204ENST00000472217 IGLV10-54A0A075B6I4 117 aa5.86□□□□□ -1.47
USF1-204ENST00000472217 TRAV26-2A0A0B4J265 109 aa5.86□□□□□ -1.47
USF1-204ENST00000472217 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
USF1-204ENST00000472217 PRSS1P07477 247 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms