RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ALKAL2Q6UX46 152 aa11.39□□□□□ -0.59
SSBP1-207ENST00000468267 AP1S3Q96PC3 154 aa11.39□□□□□ -0.59
SSBP1-207ENST00000468267 TPPP3Q9BW30 176 aa11.39□□□□□ -0.59
SSBP1-207ENST00000468267 URGCP-MRPS24S4R325 110 aa11.39□□□□□ -0.59
SSBP1-207ENST00000468267 XKRY2A2RUG3 117 aa11.38□□□□□ -0.59
SSBP1-207ENST00000468267 KRTAP10-1P60331 282 aa11.38□□□□□ -0.59
SSBP1-207ENST00000468267 Q8N1X5 172 aa11.38□□□□□ -0.59
SSBP1-207ENST00000468267 F2Z2F3 143 aa11.37□□□□□ -0.59
SSBP1-207ENST00000468267 CACNG7P62955 275 aa11.37□□□□□ -0.59
SSBP1-207ENST00000468267 NUDT10Q8NFP7 164 aa11.37□□□□□ -0.59
SSBP1-207ENST00000468267 LYPD6BQ8NI32 183 aa11.37□□□□□ -0.59
SSBP1-207ENST00000468267 NTN5Q8WTR8 489 aaPredicted RBP11.37□□□□□ -0.59
SSBP1-207ENST00000468267 NUDT11Q96G61 164 aa11.37□□□□□ -0.59
SSBP1-207ENST00000468267 CHCHD7Q9BUK0 85 aa11.37□□□□□ -0.59
SSBP1-207ENST00000468267 DNAH8Q96JB1 4490 aa11.36□□□□□ -0.59
SSBP1-207ENST00000468267 A0A087WX48 190 aa11.36□□□□□ -0.59
SSBP1-207ENST00000468267 TRBV6-8A0A0A6YYG3 113 aa11.36□□□□□ -0.59
SSBP1-207ENST00000468267 GCSHP23434 173 aa11.36□□□□□ -0.59
SSBP1-207ENST00000468267 Q8N814 137 aa11.36□□□□□ -0.59
SSBP1-207ENST00000468267 OCC1Q8TAD7 63 aa11.36□□□□□ -0.59
SSBP1-207ENST00000468267 LYZL1Q6UWQ5 148 aa11.35□□□□□ -0.59
SSBP1-207ENST00000468267 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.35□□□□□ -0.59
SSBP1-207ENST00000468267 KLK12Q9UKR0 248 aa11.35□□□□□ -0.59
SSBP1-207ENST00000468267 FAT1Q14517 4588 aa11.35□□□□□ -0.59
SSBP1-207ENST00000468267 IGLV5-52A0A0A0MRZ9 124 aa11.34□□□□□ -0.59
SSBP1-207ENST00000468267 TMEM250H0YL14 139 aa11.34□□□□□ -0.59
SSBP1-207ENST00000468267 K7EN84 100 aa11.34□□□□□ -0.59
SSBP1-207ENST00000468267 XGP55808 180 aa11.34□□□□□ -0.59
SSBP1-207ENST00000468267 ELOBQ15370 118 aa11.34□□□□□ -0.59
SSBP1-207ENST00000468267 WDR73Q6P4I2 378 aa11.34□□□□□ -0.59
SSBP1-207ENST00000468267 KCNIP4Q6PIL6 250 aa11.34□□□□□ -0.59
SSBP1-207ENST00000468267 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
SSBP1-207ENST00000468267 VPS13BQ7Z7G8 4022 aa11.33□□□□□ -0.6
SSBP1-207ENST00000468267 A0A1B0GVG6 124 aa11.33□□□□□ -0.6
SSBP1-207ENST00000468267 TMEM262E9PQX1 116 aa11.33□□□□□ -0.6
SSBP1-207ENST00000468267 M0QY20 66 aa11.33□□□□□ -0.6
SSBP1-207ENST00000468267 MGPP08493 103 aa11.33□□□□□ -0.6
SSBP1-207ENST00000468267 NKX2-5P52952 324 aaPredicted RBP11.33□□□□□ -0.6
SSBP1-207ENST00000468267 WFDC2Q14508 124 aa11.33□□□□□ -0.6
SSBP1-207ENST00000468267 RMI2Q96E14 147 aa11.33□□□□□ -0.6
SSBP1-207ENST00000468267 DNAJC30Q96LL9 226 aa11.33□□□□□ -0.6
SSBP1-207ENST00000468267 NTF3P20783 257 aa11.32□□□□□ -0.6
SSBP1-207ENST00000468267 CTRLP40313 264 aa11.32□□□□□ -0.6
SSBP1-207ENST00000468267 TMEM97Q5BJF2 176 aa11.32□□□□□ -0.6
SSBP1-207ENST00000468267 SUMO4Q6EEV6 95 aa11.32□□□□□ -0.6
SSBP1-207ENST00000468267 NTM-AS1Q6ZSK4 140 aa11.32□□□□□ -0.6
SSBP1-207ENST00000468267 RNASE7Q9H1E1 156 aaKnown RBP11.32□□□□□ -0.6
SSBP1-207ENST00000468267 RPP21Q9H633 154 aaKnown RBP11.32□□□□□ -0.6
SSBP1-207ENST00000468267 H7C1H1 209 aa11.31□□□□□ -0.6
SSBP1-207ENST00000468267 TRGC1P0CF51 173 aa11.31□□□□□ -0.6
SSBP1-207ENST00000468267 UBE2WQ96B02 151 aa11.31□□□□□ -0.6
SSBP1-207ENST00000468267 IGKV2D-24A0A075B6R9 120 aa11.3□□□□□ -0.6
SSBP1-207ENST00000468267 LECT2O14960 151 aa11.3□□□□□ -0.6
SSBP1-207ENST00000468267 PKIAP61925 76 aa11.3□□□□□ -0.6
SSBP1-207ENST00000468267 Q0VG73 95 aa11.3□□□□□ -0.6
SSBP1-207ENST00000468267 ATRAIDQ6UW56 229 aa11.3□□□□□ -0.6
SSBP1-207ENST00000468267 BAALCQ8WXS3 180 aa11.3□□□□□ -0.6
SSBP1-207ENST00000468267 CHCHD5Q9BSY4 110 aa11.3□□□□□ -0.6
SSBP1-207ENST00000468267 CNFNQ9BYD5 112 aa11.3□□□□□ -0.6
SSBP1-207ENST00000468267 DPH3P1Q9H4G8 78 aa11.3□□□□□ -0.6
SSBP1-207ENST00000468267 MPV17L2Q567V2 206 aa11.29□□□□□ -0.6
SSBP1-207ENST00000468267 SRRM2Q9UQ35 2752 aaKnown RBP11.28□□□□□ -0.6
SSBP1-207ENST00000468267 NDUFS6O75380 124 aaKnown RBP11.28□□□□□ -0.6
SSBP1-207ENST00000468267 TWIST1Q15672 202 aa11.28□□□□□ -0.6
SSBP1-207ENST00000468267 RASL11AQ6T310 242 aa11.28□□□□□ -0.6
SSBP1-207ENST00000468267 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
SSBP1-207ENST00000468267 TRBV25-1A0A075B6N4 114 aa11.27□□□□□ -0.61
SSBP1-207ENST00000468267 CEBPGP53567 150 aa11.27□□□□□ -0.61
SSBP1-207ENST00000468267 ENHOQ6UWT2 76 aa11.27□□□□□ -0.61
SSBP1-207ENST00000468267 FAM231DQ6ZW35 169 aa11.27□□□□□ -0.61
SSBP1-207ENST00000468267 GTSF1Q8WW33 167 aa11.27□□□□□ -0.61
SSBP1-207ENST00000468267 TMEM70Q9BUB7 260 aa11.27□□□□□ -0.61
SSBP1-207ENST00000468267 EIF5A2Q9GZV4 153 aaKnown RBP11.27□□□□□ -0.61
SSBP1-207ENST00000468267 NIT2Q9NQR4 276 aa11.27□□□□□ -0.61
SSBP1-207ENST00000468267 GATCO43716 136 aaKnown RBP11.26□□□□□ -0.61
SSBP1-207ENST00000468267 ANGP03950 147 aaKnown RBP11.26□□□□□ -0.61
SSBP1-207ENST00000468267 IQCJQ1A5X6 159 aa11.26□□□□□ -0.61
SSBP1-207ENST00000468267 Q8N976 141 aa11.26□□□□□ -0.61
SSBP1-207ENST00000468267 FAM210AQ96ND0 272 aa11.26□□□□□ -0.61
SSBP1-207ENST00000468267 IGHV1-24A0A0C4DH33 117 aa11.25□□□□□ -0.61
SSBP1-207ENST00000468267 GAGE6Q13070 117 aa11.25□□□□□ -0.61
SSBP1-207ENST00000468267 SMIM7Q9BQ49 75 aa11.25□□□□□ -0.61
SSBP1-207ENST00000468267 C1orf43Q9BWL3 253 aa11.25□□□□□ -0.61
SSBP1-207ENST00000468267 A8MWL6 223 aa11.24□□□□□ -0.61
SSBP1-207ENST00000468267 EPM2AB3EWF7 344 aa11.24□□□□□ -0.61
SSBP1-207ENST00000468267 CRPP02741 224 aa11.24□□□□□ -0.61
SSBP1-207ENST00000468267 RBX1P62877 108 aa11.24□□□□□ -0.61
SSBP1-207ENST00000468267 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-207ENST00000468267 SRP19P09132 144 aaKnown RBP11.23□□□□□ -0.61
SSBP1-207ENST00000468267 MIAQ16674 131 aa11.23□□□□□ -0.61
SSBP1-207ENST00000468267 CT83Q5H943 113 aa11.23□□□□□ -0.61
SSBP1-207ENST00000468267 FRZBQ92765 325 aa11.23□□□□□ -0.61
SSBP1-207ENST00000468267 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
SSBP1-207ENST00000468267 FOXA3P55318 350 aaPredicted RBP11.22□□□□□ -0.61
SSBP1-207ENST00000468267 SMIM15Q7Z3B0 74 aa11.22□□□□□ -0.61
SSBP1-207ENST00000468267 LINC01551Q86U37 167 aa11.22□□□□□ -0.61
SSBP1-207ENST00000468267 GATD1Q8NB37 220 aa11.22□□□□□ -0.61
SSBP1-207ENST00000468267 PRR34Q9NV39 138 aa11.22□□□□□ -0.61
SSBP1-207ENST00000468267 FAM30AQ9NZY2 134 aa11.22□□□□□ -0.61
SSBP1-207ENST00000468267 ZNF727A8MUV8 499 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms