RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 RNF185Q96GF1 192 aa11.02□□□□□ -0.65
HMGN1-210ENST00000464078 ALG5Q9Y673 324 aa11.02□□□□□ -0.65
HMGN1-210ENST00000464078 BORCS7-ASMTA0A0B4J1R7 106 aa11.01□□□□□ -0.65
HMGN1-210ENST00000464078 CLPSL2Q6UWE3 100 aa11.01□□□□□ -0.65
HMGN1-210ENST00000464078 LINC00269Q8N2A0 174 aa11.01□□□□□ -0.65
HMGN1-210ENST00000464078 ZNF471Q9BX82 626 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-210ENST00000464078 SNAI2O43623 268 aa11□□□□□ -0.65
HMGN1-210ENST00000464078 SSBP4Q9BWG4 385 aaPredicted RBP11□□□□□ -0.65
HMGN1-210ENST00000464078 TRBV25-1A0A075B6N4 114 aa10.99□□□□□ -0.65
HMGN1-210ENST00000464078 MAP1LC3B2A6NCE7 125 aa10.99□□□□□ -0.65
HMGN1-210ENST00000464078 OR5AL1P0C617 328 aa10.99□□□□□ -0.65
HMGN1-210ENST00000464078 IQCJQ1A5X6 159 aa10.99□□□□□ -0.65
HMGN1-210ENST00000464078 INO80EQ8NBZ0 244 aaPredicted RBP10.99□□□□□ -0.65
HMGN1-210ENST00000464078 MAP1LC3BQ9GZQ8 125 aa10.99□□□□□ -0.65
HMGN1-210ENST00000464078 RNF213Q63HN8 5207 aa10.98□□□□□ -0.65
HMGN1-210ENST00000464078 AKR1C3P42330 323 aa10.98□□□□□ -0.65
HMGN1-210ENST00000464078 REG3AQ06141 175 aa10.98□□□□□ -0.65
HMGN1-210ENST00000464078 Q5BKY6 102 aa10.98□□□□□ -0.65
HMGN1-210ENST00000464078 AKR1C8PQ5T2L2 129 aa10.98□□□□□ -0.65
HMGN1-210ENST00000464078 DERL1Q9BUN8 251 aa10.98□□□□□ -0.65
HMGN1-210ENST00000464078 IGHV3-64A0A075B6Q5 118 aa10.97□□□□□ -0.65
HMGN1-210ENST00000464078 TRAV8-4A0A0B4J246 113 aa10.97□□□□□ -0.65
HMGN1-210ENST00000464078 A6NHS1 94 aa10.97□□□□□ -0.65
HMGN1-210ENST00000464078 P01737 135 aa10.97□□□□□ -0.65
HMGN1-210ENST00000464078 GAGE6Q13070 117 aa10.97□□□□□ -0.65
HMGN1-210ENST00000464078 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
HMGN1-210ENST00000464078 KIF25-AS1Q9Y6Z4 181 aa10.97□□□□□ -0.65
HMGN1-210ENST00000464078 A0A087WYN8 130 aa10.96□□□□□ -0.65
HMGN1-210ENST00000464078 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-210ENST00000464078 hDV102S1A0JD36 115 aa10.96□□□□□ -0.65
HMGN1-210ENST00000464078 F5H697 171 aa10.96□□□□□ -0.65
HMGN1-210ENST00000464078 GIPP09681 153 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-210ENST00000464078 MED28Q9H204 178 aa10.96□□□□□ -0.65
HMGN1-210ENST00000464078 IGLV10-54A0A075B6I4 117 aa10.95□□□□□ -0.66
HMGN1-210ENST00000464078 IGHV1-24A0A0C4DH33 117 aa10.95□□□□□ -0.66
HMGN1-210ENST00000464078 S100A9P06702 114 aaKnown RBP10.95□□□□□ -0.66
HMGN1-210ENST00000464078 SPANXN1Q5VSR9 72 aa10.95□□□□□ -0.66
HMGN1-210ENST00000464078 CST9LP1Q5W188 147 aa10.95□□□□□ -0.66
HMGN1-210ENST00000464078 STOML3Q8TAV4 291 aa10.95□□□□□ -0.66
HMGN1-210ENST00000464078 AP1S3Q96PC3 154 aa10.95□□□□□ -0.66
HMGN1-210ENST00000464078 MLST8Q9BVC4 326 aa10.95□□□□□ -0.66
HMGN1-210ENST00000464078 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
HMGN1-210ENST00000464078 SLPIP03973 132 aa10.94□□□□□ -0.66
HMGN1-210ENST00000464078 CHTF8P0CG12 524 aa10.94□□□□□ -0.66
HMGN1-210ENST00000464078 GZMBP10144 247 aa10.94□□□□□ -0.66
HMGN1-210ENST00000464078 C20orf203Q8NBC4 194 aa10.94□□□□□ -0.66
HMGN1-210ENST00000464078 AP5S1Q9NUS5 200 aa10.94□□□□□ -0.66
HMGN1-210ENST00000464078 A0A1B0GUV1 79 aa10.93□□□□□ -0.66
HMGN1-210ENST00000464078 SMIM17P0DL12 118 aa10.93□□□□□ -0.66
HMGN1-210ENST00000464078 FXYD6-FXYD2A0A087WZ82 144 aa10.92□□□□□ -0.66
HMGN1-210ENST00000464078 M0QY20 66 aa10.92□□□□□ -0.66
HMGN1-210ENST00000464078 MUC21A0A0G2JKD1 596 aa10.91□□□□□ -0.66
HMGN1-210ENST00000464078 MUC21A0A140T8X8 626 aa10.91□□□□□ -0.66
HMGN1-210ENST00000464078 H7C1H1 209 aa10.91□□□□□ -0.66
HMGN1-210ENST00000464078 PHOX2AO14813 284 aa10.91□□□□□ -0.66
HMGN1-210ENST00000464078 C7orf33Q8WU49 177 aa10.91□□□□□ -0.66
HMGN1-210ENST00000464078 LINC01600Q96MT4 127 aa10.91□□□□□ -0.66
HMGN1-210ENST00000464078 PAGE4O60829 102 aa10.9□□□□□ -0.66
HMGN1-210ENST00000464078 DPH3Q96FX2 82 aa10.9□□□□□ -0.66
HMGN1-210ENST00000464078 GFRA4Q9GZZ7 299 aa10.9□□□□□ -0.66
HMGN1-210ENST00000464078 IGLV4-60A0A075B6I1 120 aa10.89□□□□□ -0.67
HMGN1-210ENST00000464078 BAGE2Q86Y30 109 aa10.89□□□□□ -0.67
HMGN1-210ENST00000464078 TMEM243Q9BU79 118 aa10.89□□□□□ -0.67
HMGN1-210ENST00000464078 CYTL1Q9NRR1 136 aa10.89□□□□□ -0.67
HMGN1-210ENST00000464078 SCO2A0A1W2PP80 73 aa10.88□□□□□ -0.67
HMGN1-210ENST00000464078 PRR3P79522 188 aaKnown RBP10.88□□□□□ -0.67
HMGN1-210ENST00000464078 C15orf56Q8N910 161 aa10.88□□□□□ -0.67
HMGN1-210ENST00000464078 PGLYRP4Q96LB8 373 aa10.88□□□□□ -0.67
HMGN1-210ENST00000464078 DPH3P1Q9H4G8 78 aa10.88□□□□□ -0.67
HMGN1-210ENST00000464078 G3V3Q6 166 aa10.87□□□□□ -0.67
HMGN1-210ENST00000464078 SUMO4Q6EEV6 95 aa10.87□□□□□ -0.67
HMGN1-210ENST00000464078 PFDN1O60925 122 aa10.86□□□□□ -0.67
HMGN1-210ENST00000464078 IGLC6P0CF74 106 aa10.86□□□□□ -0.67
HMGN1-210ENST00000464078 SSTP61278 116 aa10.86□□□□□ -0.67
HMGN1-210ENST00000464078 WDR73Q6P4I2 378 aa10.86□□□□□ -0.67
HMGN1-210ENST00000464078 MBD3L1Q8WWY6 194 aa10.86□□□□□ -0.67
HMGN1-210ENST00000464078 MGPP08493 103 aa10.85□□□□□ -0.67
HMGN1-210ENST00000464078 COX6A2Q02221 97 aa10.85□□□□□ -0.67
HMGN1-210ENST00000464078 A0A0J9YXV3 536 aa10.84□□□□□ -0.67
HMGN1-210ENST00000464078 NDUFS6O75380 124 aaKnown RBP10.84□□□□□ -0.67
HMGN1-210ENST00000464078 RPS10P46783 165 aaKnown RBP10.84□□□□□ -0.67
HMGN1-210ENST00000464078 RAB5CP51148 216 aa10.84□□□□□ -0.67
HMGN1-210ENST00000464078 NKX2-5P52952 324 aaPredicted RBP10.84□□□□□ -0.67
HMGN1-210ENST00000464078 CFAP161Q6P656 301 aa10.84□□□□□ -0.67
HMGN1-210ENST00000464078 RASL11AQ6T310 242 aa10.84□□□□□ -0.67
HMGN1-210ENST00000464078 SFT2D1Q8WV19 159 aa10.84□□□□□ -0.67
HMGN1-210ENST00000464078 ARPC5O15511 151 aa10.83□□□□□ -0.68
HMGN1-210ENST00000464078 SULT1A2P50226 295 aa10.83□□□□□ -0.68
HMGN1-210ENST00000464078 CACNG7P62955 275 aa10.83□□□□□ -0.68
HMGN1-210ENST00000464078 TMUB2Q71RG4 321 aa10.83□□□□□ -0.68
HMGN1-210ENST00000464078 FER1L6-AS1Q8NA97 138 aa10.83□□□□□ -0.68
HMGN1-210ENST00000464078 UMAD1C9J7I0 102 aa10.82□□□□□ -0.68
HMGN1-210ENST00000464078 UBE2L6O14933 153 aa10.82□□□□□ -0.68
HMGN1-210ENST00000464078 RPL35P42766 123 aaKnown RBP10.82□□□□□ -0.68
HMGN1-210ENST00000464078 MAJINQ3KP22 176 aa10.82□□□□□ -0.68
HMGN1-210ENST00000464078 PRSS3P2Q8NHM4 247 aa10.82□□□□□ -0.68
HMGN1-210ENST00000464078 NIT2Q9NQR4 276 aa10.82□□□□□ -0.68
HMGN1-210ENST00000464078 GVQW2A0A096LPI5 108 aaPredicted RBP10.81□□□□□ -0.68
HMGN1-210ENST00000464078 GAGE12HA6NDE8 117 aa10.81□□□□□ -0.68
HMGN1-210ENST00000464078 AMTP48728 403 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms