RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 TMEM97Q5BJF2 176 aa13.22□□□□□ -0.29
CPSF7-209ENST00000463244 Q5BKY6 102 aa13.22□□□□□ -0.29
CPSF7-209ENST00000463244 TCEAL7Q9BRU2 100 aa13.22□□□□□ -0.29
CPSF7-209ENST00000463244 ZNF471Q9BX82 626 aaPredicted RBP13.21□□□□□ -0.29
CPSF7-209ENST00000463244 BORCS7-ASMTA0A0B4J1R7 106 aa13.2□□□□□ -0.3
CPSF7-209ENST00000463244 CXCL1P09341 107 aa13.2□□□□□ -0.3
CPSF7-209ENST00000463244 GAGE6Q13070 117 aa13.2□□□□□ -0.3
CPSF7-209ENST00000463244 INO80EQ8NBZ0 244 aaPredicted RBP13.2□□□□□ -0.3
CPSF7-209ENST00000463244 MAP1LC3B2A6NCE7 125 aa13.19□□□□□ -0.3
CPSF7-209ENST00000463244 FHITP49789 147 aa13.19□□□□□ -0.3
CPSF7-209ENST00000463244 AKR1C8PQ5T2L2 129 aa13.19□□□□□ -0.3
CPSF7-209ENST00000463244 DERL1Q9BUN8 251 aa13.19□□□□□ -0.3
CPSF7-209ENST00000463244 SSBP4Q9BWG4 385 aaPredicted RBP13.19□□□□□ -0.3
CPSF7-209ENST00000463244 MAP1LC3BQ9GZQ8 125 aa13.19□□□□□ -0.3
CPSF7-209ENST00000463244 TRBV25-1A0A075B6N4 114 aa13.18□□□□□ -0.3
CPSF7-209ENST00000463244 A6NHS1 94 aa13.18□□□□□ -0.3
CPSF7-209ENST00000463244 F5H697 171 aa13.18□□□□□ -0.3
CPSF7-209ENST00000463244 SNAI2O43623 268 aa13.18□□□□□ -0.3
CPSF7-209ENST00000463244 AKR1C3P42330 323 aa13.18□□□□□ -0.3
CPSF7-209ENST00000463244 IGLV10-54A0A075B6I4 117 aa13.17□□□□□ -0.3
CPSF7-209ENST00000463244 hDV102S1A0JD36 115 aa13.17□□□□□ -0.3
CPSF7-209ENST00000463244 REG3AQ06141 175 aa13.17□□□□□ -0.3
CPSF7-209ENST00000463244 IQCJQ1A5X6 159 aa13.17□□□□□ -0.3
CPSF7-209ENST00000463244 CST9LP1Q5W188 147 aa13.17□□□□□ -0.3
CPSF7-209ENST00000463244 RNF185Q96GF1 192 aa13.17□□□□□ -0.3
CPSF7-209ENST00000463244 MED28Q9H204 178 aa13.17□□□□□ -0.3
CPSF7-209ENST00000463244 A0A087WYN8 130 aa13.16□□□□□ -0.3
CPSF7-209ENST00000463244 MUC21A0A0G2JKD1 596 aa13.16□□□□□ -0.3
CPSF7-209ENST00000463244 MUC21A0A140T8X8 626 aa13.16□□□□□ -0.3
CPSF7-209ENST00000463244 OR5AL1P0C617 328 aa13.16□□□□□ -0.3
CPSF7-209ENST00000463244 SPANXN1Q5VSR9 72 aa13.16□□□□□ -0.3
CPSF7-209ENST00000463244 IGHV3-64A0A075B6Q5 118 aa13.15□□□□□ -0.3
CPSF7-209ENST00000463244 SLPIP03973 132 aa13.15□□□□□ -0.3
CPSF7-209ENST00000463244 STOML3Q8TAV4 291 aa13.15□□□□□ -0.3
CPSF7-209ENST00000463244 SPACA4Q8TDM5 124 aa13.15□□□□□ -0.3
CPSF7-209ENST00000463244 DPH3Q96FX2 82 aa13.15□□□□□ -0.3
CPSF7-209ENST00000463244 KIF25-AS1Q9Y6Z4 181 aa13.15□□□□□ -0.3
CPSF7-209ENST00000463244 GIPP09681 153 aaPredicted RBP13.14□□□□□ -0.31
CPSF7-209ENST00000463244 CHTF8P0CG12 524 aa13.14□□□□□ -0.31
CPSF7-209ENST00000463244 MLST8Q9BVC4 326 aa13.14□□□□□ -0.31
CPSF7-209ENST00000463244 FXYD6-FXYD2A0A087WZ82 144 aa13.13□□□□□ -0.31
CPSF7-209ENST00000463244 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.13□□□□□ -0.31
CPSF7-209ENST00000463244 TRAV8-4A0A0B4J246 113 aa13.13□□□□□ -0.31
CPSF7-209ENST00000463244 IGHV1-24A0A0C4DH33 117 aa13.13□□□□□ -0.31
CPSF7-209ENST00000463244 P01737 135 aa13.13□□□□□ -0.31
CPSF7-209ENST00000463244 C20orf203Q8NBC4 194 aa13.13□□□□□ -0.31
CPSF7-209ENST00000463244 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
CPSF7-209ENST00000463244 S100A9P06702 114 aaKnown RBP13.12□□□□□ -0.31
CPSF7-209ENST00000463244 SMIM17P0DL12 118 aa13.12□□□□□ -0.31
CPSF7-209ENST00000463244 SSTP61278 116 aa13.12□□□□□ -0.31
CPSF7-209ENST00000463244 AP1S3Q96PC3 154 aa13.12□□□□□ -0.31
CPSF7-209ENST00000463244 PAGE4O60829 102 aa13.11□□□□□ -0.31
CPSF7-209ENST00000463244 PLAC8Q9NZF1 115 aa13.11□□□□□ -0.31
CPSF7-209ENST00000463244 A0A1B0GUV1 79 aa13.1□□□□□ -0.31
CPSF7-209ENST00000463244 PHOX2AO14813 284 aa13.1□□□□□ -0.31
CPSF7-209ENST00000463244 BAGE2Q86Y30 109 aa13.1□□□□□ -0.31
CPSF7-209ENST00000463244 SCO2A0A1W2PP80 73 aa13.09□□□□□ -0.31
CPSF7-209ENST00000463244 M0QY20 66 aa13.09□□□□□ -0.31
CPSF7-209ENST00000463244 GZMBP10144 247 aa13.09□□□□□ -0.31
CPSF7-209ENST00000463244 C7orf33Q8WU49 177 aa13.09□□□□□ -0.31
CPSF7-209ENST00000463244 GFRA4Q9GZZ7 299 aa13.09□□□□□ -0.31
CPSF7-209ENST00000463244 IGLV4-60A0A075B6I1 120 aa13.08□□□□□ -0.32
CPSF7-209ENST00000463244 DPH3P1Q9H4G8 78 aa13.08□□□□□ -0.32
CPSF7-209ENST00000463244 CYTL1Q9NRR1 136 aa13.08□□□□□ -0.32
CPSF7-209ENST00000463244 RAB5CP51148 216 aa13.07□□□□□ -0.32
CPSF7-209ENST00000463244 LINC01600Q96MT4 127 aa13.07□□□□□ -0.32
CPSF7-209ENST00000463244 TMEM243Q9BU79 118 aa13.07□□□□□ -0.32
CPSF7-209ENST00000463244 H7C1H1 209 aa13.06□□□□□ -0.32
CPSF7-209ENST00000463244 SUMO4Q6EEV6 95 aa13.06□□□□□ -0.32
CPSF7-209ENST00000463244 MGPP08493 103 aa13.05□□□□□ -0.32
CPSF7-209ENST00000463244 G3V3Q6 166 aa13.04□□□□□ -0.32
CPSF7-209ENST00000463244 NKX2-5P52952 324 aaPredicted RBP13.04□□□□□ -0.32
CPSF7-209ENST00000463244 COX6A2Q02221 97 aa13.04□□□□□ -0.32
CPSF7-209ENST00000463244 C15orf56Q8N910 161 aa13.04□□□□□ -0.32
CPSF7-209ENST00000463244 PFDN1O60925 122 aa13.03□□□□□ -0.32
CPSF7-209ENST00000463244 PRR3P79522 188 aaKnown RBP13.03□□□□□ -0.32
CPSF7-209ENST00000463244 ODF1Q14990 250 aa13.03□□□□□ -0.32
CPSF7-209ENST00000463244 WDR73Q6P4I2 378 aa13.03□□□□□ -0.32
CPSF7-209ENST00000463244 SFT2D1Q8WV19 159 aa13.03□□□□□ -0.32
CPSF7-209ENST00000463244 PGLYRP4Q96LB8 373 aa13.03□□□□□ -0.32
CPSF7-209ENST00000463244 IGLC6P0CF74 106 aa13.02□□□□□ -0.33
CPSF7-209ENST00000463244 TMUB2Q71RG4 321 aa13.02□□□□□ -0.33
CPSF7-209ENST00000463244 GTSF1Q8WW33 167 aa13.02□□□□□ -0.33
CPSF7-209ENST00000463244 MBD3L1Q8WWY6 194 aa13.02□□□□□ -0.33
CPSF7-209ENST00000463244 A0A1B0GV50 99 aa13.01□□□□□ -0.33
CPSF7-209ENST00000463244 ARPC5O15511 151 aa13.01□□□□□ -0.33
CPSF7-209ENST00000463244 NDUFS6O75380 124 aaKnown RBP13.01□□□□□ -0.33
CPSF7-209ENST00000463244 RPS10P46783 165 aaKnown RBP13.01□□□□□ -0.33
CPSF7-209ENST00000463244 CFAP161Q6P656 301 aa13.01□□□□□ -0.33
CPSF7-209ENST00000463244 RASL11AQ6T310 242 aa13.01□□□□□ -0.33
CPSF7-209ENST00000463244 TPPP3Q9BW30 176 aa13.01□□□□□ -0.33
CPSF7-209ENST00000463244 UBE2L6O14933 153 aa13□□□□□ -0.33
CPSF7-209ENST00000463244 RPL35P42766 123 aaKnown RBP13□□□□□ -0.33
CPSF7-209ENST00000463244 SULT1A2P50226 295 aa13□□□□□ -0.33
CPSF7-209ENST00000463244 MAJINQ3KP22 176 aa13□□□□□ -0.33
CPSF7-209ENST00000463244 FER1L6-AS1Q8NA97 138 aa13□□□□□ -0.33
CPSF7-209ENST00000463244 PRSS3P2Q8NHM4 247 aa13□□□□□ -0.33
CPSF7-209ENST00000463244 IGKV2-24A0A0C4DH68 120 aa12.99□□□□□ -0.33
CPSF7-209ENST00000463244 GAGE12HA6NDE8 117 aa12.99□□□□□ -0.33
CPSF7-209ENST00000463244 FAM213BQ8TBF2 198 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms