RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 FER1L6-AS1Q8NA97 138 aa6.78□□□□□ -1.32
SF3A3-204ENST00000462258 NEXN-AS1Q8NBZ9 246 aa6.78□□□□□ -1.32
SF3A3-204ENST00000462258 A0A087WX48 190 aa6.77□□□□□ -1.33
SF3A3-204ENST00000462258 XKRY2A2RUG3 117 aa6.77□□□□□ -1.33
SF3A3-204ENST00000462258 RBFOX3A6NFN3 312 aa6.77□□□□□ -1.33
SF3A3-204ENST00000462258 F5H697 171 aa6.77□□□□□ -1.33
SF3A3-204ENST00000462258 GCSHP23434 173 aa6.77□□□□□ -1.33
SF3A3-204ENST00000462258 KCNIP4Q6PIL6 250 aa6.77□□□□□ -1.33
SF3A3-204ENST00000462258 ALKAL2Q6UX46 152 aa6.77□□□□□ -1.33
SF3A3-204ENST00000462258 CHCHD7Q9BUK0 85 aa6.77□□□□□ -1.33
SF3A3-204ENST00000462258 BIN3Q9NQY0 253 aa6.77□□□□□ -1.33
SF3A3-204ENST00000462258 KIF25-AS1Q9Y6Z4 181 aa6.77□□□□□ -1.33
SF3A3-204ENST00000462258 TRBV6-8A0A0A6YYG3 113 aa6.76□□□□□ -1.33
SF3A3-204ENST00000462258 MGPP08493 103 aa6.76□□□□□ -1.33
SF3A3-204ENST00000462258 SMCPP49901 116 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-204ENST00000462258 CACNG7P62955 275 aa6.76□□□□□ -1.33
SF3A3-204ENST00000462258 WFDC2Q14508 124 aa6.76□□□□□ -1.33
SF3A3-204ENST00000462258 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-204ENST00000462258 RMI2Q96E14 147 aa6.76□□□□□ -1.33
SF3A3-204ENST00000462258 KLK12Q9UKR0 248 aa6.76□□□□□ -1.33
SF3A3-204ENST00000462258 IGKV2D-24A0A075B6R9 120 aa6.75□□□□□ -1.33
SF3A3-204ENST00000462258 LECT2O14960 151 aa6.75□□□□□ -1.33
SF3A3-204ENST00000462258 ELOBQ15370 118 aa6.75□□□□□ -1.33
SF3A3-204ENST00000462258 UBE2WQ96B02 151 aa6.75□□□□□ -1.33
SF3A3-204ENST00000462258 DNAJC30Q96LL9 226 aa6.75□□□□□ -1.33
SF3A3-204ENST00000462258 COX11Q9Y6N1 276 aa6.75□□□□□ -1.33
SF3A3-204ENST00000462258 TMEM262E9PQX1 116 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 F2Z2F3 143 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 H7C1H1 209 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 K7EN84 100 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 CRPP02741 224 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 TRGC1P0CF51 173 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 CTRLP40313 264 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 XGP55808 180 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 BLOC1S1P78537 153 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 MPV17L2Q567V2 206 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 SUMO4Q6EEV6 95 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 CHCHD5Q9BSY4 110 aa6.74□□□□□ -1.33
SF3A3-204ENST00000462258 RPP21Q9H633 154 aaKnown RBP6.74□□□□□ -1.33
SF3A3-204ENST00000462258 TMEM250H0YL14 139 aa6.73□□□□□ -1.33
SF3A3-204ENST00000462258 PKIAP61925 76 aa6.73□□□□□ -1.33
SF3A3-204ENST00000462258 TMEM97Q5BJF2 176 aa6.73□□□□□ -1.33
SF3A3-204ENST00000462258 LYZL1Q6UWQ5 148 aa6.73□□□□□ -1.33
SF3A3-204ENST00000462258 NUDT10Q8NFP7 164 aa6.73□□□□□ -1.33
SF3A3-204ENST00000462258 NUDT11Q96G61 164 aa6.73□□□□□ -1.33
SF3A3-204ENST00000462258 RNASE7Q9H1E1 156 aaKnown RBP6.73□□□□□ -1.33
SF3A3-204ENST00000462258 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-204ENST00000462258 TRBV25-1A0A075B6N4 114 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 EPM2AB3EWF7 344 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 M0QY20 66 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 NKX2-5P52952 324 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-204ENST00000462258 HAMPP81172 84 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 Q0VG73 95 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 ATRAIDQ6UW56 229 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 NTM-AS1Q6ZSK4 140 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 C15orf54Q8N8G6 183 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 LYPD6BQ8NI32 183 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 BAALCQ8WXS3 180 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 TMEM70Q9BUB7 260 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 C1orf43Q9BWL3 253 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 CNFNQ9BYD5 112 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 DPH3P1Q9H4G8 78 aa6.72□□□□□ -1.33
SF3A3-204ENST00000462258 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.33
SF3A3-204ENST00000462258 ANGP03950 147 aaKnown RBP6.71□□□□□ -1.34
SF3A3-204ENST00000462258 NTF3P20783 257 aa6.71□□□□□ -1.34
SF3A3-204ENST00000462258 CEBPGP53567 150 aa6.71□□□□□ -1.34
SF3A3-204ENST00000462258 Q5VSD8 79 aa6.71□□□□□ -1.34
SF3A3-204ENST00000462258 RASL11AQ6T310 242 aa6.71□□□□□ -1.34
SF3A3-204ENST00000462258 Q8N976 141 aa6.71□□□□□ -1.34
SF3A3-204ENST00000462258 OCC1Q8TAD7 63 aa6.71□□□□□ -1.34
SF3A3-204ENST00000462258 FRZBQ92765 325 aa6.71□□□□□ -1.34
SF3A3-204ENST00000462258 IGHV1-24A0A0C4DH33 117 aa6.7□□□□□ -1.34
SF3A3-204ENST00000462258 A0A1B0GVG6 124 aa6.7□□□□□ -1.34
SF3A3-204ENST00000462258 GAGE6Q13070 117 aa6.7□□□□□ -1.34
SF3A3-204ENST00000462258 TWIST1Q15672 202 aa6.7□□□□□ -1.34
SF3A3-204ENST00000462258 IQCJQ1A5X6 159 aa6.7□□□□□ -1.34
SF3A3-204ENST00000462258 ENHOQ6UWT2 76 aa6.7□□□□□ -1.34
SF3A3-204ENST00000462258 GATCO43716 136 aaKnown RBP6.69□□□□□ -1.34
SF3A3-204ENST00000462258 HLA-DQA1P01909 254 aa6.69□□□□□ -1.34
SF3A3-204ENST00000462258 RBX1P62877 108 aa6.69□□□□□ -1.34
SF3A3-204ENST00000462258 MIAQ16674 131 aa6.69□□□□□ -1.34
SF3A3-204ENST00000462258 WDR73Q6P4I2 378 aa6.69□□□□□ -1.34
SF3A3-204ENST00000462258 CLPSL2Q6UWE3 100 aa6.69□□□□□ -1.34
SF3A3-204ENST00000462258 FAM231DQ6ZW35 169 aa6.69□□□□□ -1.34
SF3A3-204ENST00000462258 GTSF1Q8WW33 167 aa6.69□□□□□ -1.34
SF3A3-204ENST00000462258 SMIM7Q9BQ49 75 aa6.69□□□□□ -1.34
SF3A3-204ENST00000462258 EIF5A2Q9GZV4 153 aaKnown RBP6.69□□□□□ -1.34
SF3A3-204ENST00000462258 SMR3BP02814 79 aaPredicted RBP6.68□□□□□ -1.34
SF3A3-204ENST00000462258 LINC00528Q8N1L1 170 aa6.68□□□□□ -1.34
SF3A3-204ENST00000462258 PGLYRP4Q96LB8 373 aa6.68□□□□□ -1.34
SF3A3-204ENST00000462258 FAM210AQ96ND0 272 aa6.68□□□□□ -1.34
SF3A3-204ENST00000462258 TMEM243Q9BU79 118 aa6.68□□□□□ -1.34
SF3A3-204ENST00000462258 NIT2Q9NQR4 276 aa6.68□□□□□ -1.34
SF3A3-204ENST00000462258 FAM30AQ9NZY2 134 aa6.68□□□□□ -1.34
SF3A3-204ENST00000462258 TRAV26-2A0A0B4J265 109 aa6.67□□□□□ -1.34
SF3A3-204ENST00000462258 NDUFS6O75380 124 aaKnown RBP6.67□□□□□ -1.34
SF3A3-204ENST00000462258 LINC01620Q4KN68 170 aa6.67□□□□□ -1.34
SF3A3-204ENST00000462258 C14orf177Q52M58 125 aa6.67□□□□□ -1.34
SF3A3-204ENST00000462258 CT83Q5H943 113 aa6.67□□□□□ -1.34
SF3A3-204ENST00000462258 Q6ZSA8 131 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms