RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 LINC00208Q96KT6 92 aa1□□□□□ -2.25
VBP1-202ENST00000460509 ARAP2Q8WZ64 1704 aa1□□□□□ -2.25
VBP1-202ENST00000460509 CASP8AP2Q9UKL3 1982 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 C10orf71Q711Q0 1435 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 TRAV30A0A087WSZ9 112 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 A0A087WTM6 91 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 TMEM218A2RU14 115 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 A6NIN4 97 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 S100A8P05109 93 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 IFITM1P13164 125 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 CAV3P56539 151 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 C10orf99Q6UWK7 81 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 ZNF818PQ6ZRF7 136 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 HEATR1Q9H583 2144 aaKnown RBP0.99□□□□□ -2.25
VBP1-202ENST00000460509 LRRC37A3O60309 1634 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 ARHGAP5Q13017 1502 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 ABCC10Q5T3U5 1492 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 NOTCH1P46531 2555 aa0.99□□□□□ -2.25
VBP1-202ENST00000460509 TRAV13-2A0A0B4J235 113 aa0.98□□□□□ -2.25
VBP1-202ENST00000460509 PIGBOS1A0A0B4J2F0 54 aa0.98□□□□□ -2.25
VBP1-202ENST00000460509 UBE2L5PA0A1B0GUS4 154 aa0.98□□□□□ -2.25
VBP1-202ENST00000460509 HCG22E2RYF7 251 aa0.98□□□□□ -2.25
VBP1-202ENST00000460509 SIX6O95475 246 aa0.98□□□□□ -2.25
VBP1-202ENST00000460509 UBE2L3P68036 154 aaKnown RBP0.98□□□□□ -2.25
VBP1-202ENST00000460509 KLKP1Q107X0 134 aa0.98□□□□□ -2.25
VBP1-202ENST00000460509 COMMD6Q7Z4G1 85 aa0.98□□□□□ -2.25
VBP1-202ENST00000460509 C20orf197Q8N268 126 aa0.98□□□□□ -2.25
VBP1-202ENST00000460509 SVBPQ8N300 66 aa0.98□□□□□ -2.25
VBP1-202ENST00000460509 ZNF469Q96JG9 3925 aaPredicted RBP0.98□□□□□ -2.25
VBP1-202ENST00000460509 SIPA1L3O60292 1781 aaPredicted RBP0.98□□□□□ -2.25
VBP1-202ENST00000460509 TNS1Q9HBL0 1735 aaKnown RBP0.98□□□□□ -2.25
VBP1-202ENST00000460509 TOPAZ1Q8N9V7 1692 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 PHIPQ8WWQ0 1821 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 SSSCA1O60232 199 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 SPINK8P0C7L1 97 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 ATP5EP56381 51 aaPredicted RBP0.97□□□□□ -2.25
VBP1-202ENST00000460509 ZNF56Q15929 161 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 Q86TA4 180 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 C4orf33Q8N1A6 199 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 TTC9CQ8N5M4 171 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 ACBD7Q8N6N7 88 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 AQP10Q96PS8 301 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 DPH3P1Q9H4G8 78 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 MYH9P35579 1960 aaKnown RBP0.97□□□□□ -2.25
VBP1-202ENST00000460509 TET3O43151 1660 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 ZNF609O15014 1411 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 TET1Q8NFU7 2136 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 PLXNA1Q9UIW2 1896 aa0.97□□□□□ -2.25
VBP1-202ENST00000460509 PATJQ8NI35 1801 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 FBN2P35556 2912 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 TRBV7-1A0A0A6YYK4 115 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 TRBV30A0A0K0K1B3 111 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 FAM24AA6NFZ4 105 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 FXYD1O00168 92 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 ELOF1P60002 83 aaKnown RBP0.96□□□□□ -2.26
VBP1-202ENST00000460509 COX7B2Q8TF08 81 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 BET1LQ9NYM9 111 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 LINC00312Q9Y6C7 94 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 PPIP5K1Q6PFW1 1433 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 SCAPERQ9BY12 1400 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 AFDNP55196 1824 aaKnown RBP0.96□□□□□ -2.26
VBP1-202ENST00000460509 TTC37Q6PGP7 1564 aa0.96□□□□□ -2.26
VBP1-202ENST00000460509 ANKRD26Q9UPS8 1709 aa0.95□□□□□ -2.26
VBP1-202ENST00000460509 RBAKDNA6NC62 111 aa0.95□□□□□ -2.26
VBP1-202ENST00000460509 TMEM262E9PQX1 116 aa0.95□□□□□ -2.26
VBP1-202ENST00000460509 SSBP1Q04837 148 aaKnown RBP0.95□□□□□ -2.26
VBP1-202ENST00000460509 TMEM14BQ9NUH8 114 aa0.95□□□□□ -2.26
VBP1-202ENST00000460509 LINC00474Q9P2X8 69 aa0.95□□□□□ -2.26
VBP1-202ENST00000460509 CHD1O14646 1710 aa0.95□□□□□ -2.26
VBP1-202ENST00000460509 UNC13CQ8NB66 2214 aa0.95□□□□□ -2.26
VBP1-202ENST00000460509 SHANK2Q9UPX8 1470 aa0.94□□□□□ -2.26
VBP1-202ENST00000460509 MYO18AQ92614 2054 aaKnown RBP0.94□□□□□ -2.26
VBP1-202ENST00000460509 A0A1W2PPM0 123 aa0.94□□□□□ -2.26
VBP1-202ENST00000460509 K7EIL1 84 aa0.94□□□□□ -2.26
VBP1-202ENST00000460509 DCDP81605 110 aaKnown RBP0.94□□□□□ -2.26
VBP1-202ENST00000460509 NCMAPQ5T1S8 102 aa0.94□□□□□ -2.26
VBP1-202ENST00000460509 PPP1R1CQ8WVI7 109 aa0.94□□□□□ -2.26
VBP1-202ENST00000460509 CYP4F30PQ9H0H9 118 aa0.94□□□□□ -2.26
VBP1-202ENST00000460509 TROQ12816 1431 aaPredicted RBP0.94□□□□□ -2.26
VBP1-202ENST00000460509 ABCA3Q99758 1704 aa0.94□□□□□ -2.26
VBP1-202ENST00000460509 DOCK1Q14185 1865 aa0.94□□□□□ -2.26
VBP1-202ENST00000460509 MAP2P11137 1827 aaKnown RBP0.94□□□□□ -2.26
VBP1-202ENST00000460509 AKAP12Q02952 1782 aa0.93□□□□□ -2.26
VBP1-202ENST00000460509 ABCC5O15440 1437 aa0.93□□□□□ -2.26
VBP1-202ENST00000460509 A0A096LNT2 108 aa0.93□□□□□ -2.26
VBP1-202ENST00000460509 H3BQ15 152 aa0.93□□□□□ -2.26
VBP1-202ENST00000460509 M0R143 59 aa0.93□□□□□ -2.26
VBP1-202ENST00000460509 MPC2O95563 127 aa0.93□□□□□ -2.26
VBP1-202ENST00000460509 EDDM3BP56851 147 aa0.93□□□□□ -2.26
VBP1-202ENST00000460509 S100A10P60903 97 aa0.93□□□□□ -2.26
VBP1-202ENST00000460509 Q8N6K4 173 aa0.93□□□□□ -2.26
VBP1-202ENST00000460509 MYOM1P52179 1685 aa0.93□□□□□ -2.26
VBP1-202ENST00000460509 GAPVD1Q14C86 1478 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 PRDM2Q13029 1718 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 ARHGEF5Q12774 1597 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 LY6G6CO95867 125 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 PKIAP61925 76 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 FAM74A4Q5TZK3 123 aa0.92□□□□□ -2.26
VBP1-202ENST00000460509 PLAC4Q8WY50 150 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms