RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TM2D2Q9BX73 214 aa13.4□□□□□ -0.27
HPS3-202ENST00000460120 C12orf74Q32Q52 190 aa13.39□□□□□ -0.27
HPS3-202ENST00000460120 PHLDA1Q8WV24 401 aaPredicted RBP13.39□□□□□ -0.27
HPS3-202ENST00000460120 CHD6Q8TD26 2715 aa13.39□□□□□ -0.27
HPS3-202ENST00000460120 PRRC2AP48634 2157 aaKnown RBP13.39□□□□□ -0.27
HPS3-202ENST00000460120 HIST2H2BCQ6DN03 193 aa13.39□□□□□ -0.27
HPS3-202ENST00000460120 AMTNQ6UX39 209 aa13.39□□□□□ -0.27
HPS3-202ENST00000460120 ZNF843Q8N446 348 aa13.39□□□□□ -0.27
HPS3-202ENST00000460120 IGLV4-69A0A075B6H9 119 aa13.38□□□□□ -0.27
HPS3-202ENST00000460120 IGIPA6NJ69 53 aa13.38□□□□□ -0.27
HPS3-202ENST00000460120 M0QY20 66 aa13.38□□□□□ -0.27
HPS3-202ENST00000460120 POM121L12Q8N7R1 296 aa13.38□□□□□ -0.27
HPS3-202ENST00000460120 WNK1Q9H4A3 2382 aa13.38□□□□□ -0.27
HPS3-202ENST00000460120 A0A1W2PRX2 142 aa13.38□□□□□ -0.27
HPS3-202ENST00000460120 TMEM61Q8N0U2 210 aa13.37□□□□□ -0.27
HPS3-202ENST00000460120 APCP25054 2843 aa13.37□□□□□ -0.27
HPS3-202ENST00000460120 E9PLD3 99 aa13.37□□□□□ -0.27
HPS3-202ENST00000460120 LGALS9O00182 355 aa13.37□□□□□ -0.27
HPS3-202ENST00000460120 SRSF9Q13242 221 aaKnown RBP eCLIP13.37□□□□□ -0.27
HPS3-202ENST00000460120 PMVKQ15126 192 aa13.37□□□□□ -0.27
HPS3-202ENST00000460120 FOXI2Q6ZQN5 318 aa13.37□□□□□ -0.27
HPS3-202ENST00000460120 IGLL5B9A064 214 aa13.36□□□□□ -0.27
HPS3-202ENST00000460120 DEFB113Q30KQ7 82 aa13.36□□□□□ -0.27
HPS3-202ENST00000460120 ZNF479Q96JC4 524 aa13.36□□□□□ -0.27
HPS3-202ENST00000460120 Q9UF83 564 aa13.36□□□□□ -0.27
HPS3-202ENST00000460120 TRBV7-3A0A075B6L6 115 aa13.36□□□□□ -0.27
HPS3-202ENST00000460120 TMEM89A2RUT3 159 aa13.36□□□□□ -0.27
HPS3-202ENST00000460120 RPL24P83731 157 aaKnown RBP13.36□□□□□ -0.27
HPS3-202ENST00000460120 ZNRF2Q8NHG8 242 aa13.36□□□□□ -0.27
HPS3-202ENST00000460120 CR1P17927 2039 aa13.35□□□□□ -0.27
HPS3-202ENST00000460120 NIPBLQ6KC79 2804 aaeCLIP13.35□□□□□ -0.27
HPS3-202ENST00000460120 RBMY1BA6NDE4 496 aaKnown RBP13.35□□□□□ -0.27
HPS3-202ENST00000460120 RBMY1EA6NEQ0 496 aaKnown RBP13.35□□□□□ -0.27
HPS3-202ENST00000460120 RBMY1DP0C7P1 496 aaKnown RBP13.35□□□□□ -0.27
HPS3-202ENST00000460120 RNASE13Q5GAN3 156 aaKnown RBP13.35□□□□□ -0.27
HPS3-202ENST00000460120 DLX4Q92988 240 aaPredicted RBP13.35□□□□□ -0.27
HPS3-202ENST00000460120 TSPEAR-AS2P59090 65 aa13.34□□□□□ -0.27
HPS3-202ENST00000460120 TRBV27A0A0K0K1C4 114 aa13.34□□□□□ -0.27
HPS3-202ENST00000460120 FSHBP01225 129 aa13.34□□□□□ -0.27
HPS3-202ENST00000460120 ODF3Q96PU9 254 aa13.34□□□□□ -0.27
HPS3-202ENST00000460120 H3BMG7 143 aa13.33□□□□□ -0.27
HPS3-202ENST00000460120 CEMP1Q6PRD7 247 aaPredicted RBP13.33□□□□□ -0.27
HPS3-202ENST00000460120 DYNLRB2Q8TF09 96 aa13.33□□□□□ -0.27
HPS3-202ENST00000460120 NOTCH3Q9UM47 2321 aa13.33□□□□□ -0.28
HPS3-202ENST00000460120 LINC01619G3V211 115 aa13.33□□□□□ -0.28
HPS3-202ENST00000460120 ITPR3Q14573 2671 aa13.33□□□□□ -0.28
HPS3-202ENST00000460120 IGHV3OR16-12A0A075B7B8 117 aa13.33□□□□□ -0.28
HPS3-202ENST00000460120 G3V4G9 280 aa13.33□□□□□ -0.28
HPS3-202ENST00000460120 TRPT1Q86TN4 253 aaKnown RBP13.33□□□□□ -0.28
HPS3-202ENST00000460120 OR5A1Q8NGJ0 315 aa13.33□□□□□ -0.28
HPS3-202ENST00000460120 APOMO95445 188 aa13.32□□□□□ -0.28
HPS3-202ENST00000460120 TRGV11A0A075B6L2 103 aa13.32□□□□□ -0.28
HPS3-202ENST00000460120 H3BMM0 161 aa13.31□□□□□ -0.28
HPS3-202ENST00000460120 HERVK_113P61574 105 aa13.31□□□□□ -0.28
HPS3-202ENST00000460120 AKAP9Q99996 3911 aa13.31□□□□□ -0.28
HPS3-202ENST00000460120 TAL2Q16559 108 aa13.3□□□□□ -0.28
HPS3-202ENST00000460120 TMEM141Q96I45 108 aa13.3□□□□□ -0.28
HPS3-202ENST00000460120 A6NJY4 79 aa13.3□□□□□ -0.28
HPS3-202ENST00000460120 PGPEP1Q9NXJ5 209 aa13.3□□□□□ -0.28
HPS3-202ENST00000460120 IGHV3-38A0A0C4DH36 116 aa13.29□□□□□ -0.28
HPS3-202ENST00000460120 TRBV6-5A0A0K0K1A5 114 aa13.29□□□□□ -0.28
HPS3-202ENST00000460120 Q6ZSN1 163 aa13.29□□□□□ -0.28
HPS3-202ENST00000460120 WFDC11Q8NEX6 87 aa13.29□□□□□ -0.28
HPS3-202ENST00000460120 LINC01587Q99440 93 aa13.29□□□□□ -0.28
HPS3-202ENST00000460120 TIMM17AQ99595 171 aa13.29□□□□□ -0.28
HPS3-202ENST00000460120 SPAG8Q99932 426 aaPredicted RBP13.29□□□□□ -0.28
HPS3-202ENST00000460120 MRPL16Q9NX20 251 aaKnown RBP13.29□□□□□ -0.28
HPS3-202ENST00000460120 FLNAP21333 2647 aaKnown RBP13.29□□□□□ -0.28
HPS3-202ENST00000460120 I3L3M4 83 aa13.29□□□□□ -0.28
HPS3-202ENST00000460120 RPL32P62910 135 aaKnown RBP13.29□□□□□ -0.28
HPS3-202ENST00000460120 WFDC2Q14508 124 aa13.29□□□□□ -0.28
HPS3-202ENST00000460120 A0A0J9YXV3 536 aa13.28□□□□□ -0.28
HPS3-202ENST00000460120 LINC01549A6NIU2 74 aa13.28□□□□□ -0.28
HPS3-202ENST00000460120 MAP6D1Q9H9H5 199 aa13.28□□□□□ -0.28
HPS3-202ENST00000460120 XCL2Q9UBD3 114 aa13.27□□□□□ -0.28
HPS3-202ENST00000460120 ACANP16112 2415 aa13.27□□□□□ -0.29
HPS3-202ENST00000460120 TEX48A0A1B0GUV7 120 aa13.27□□□□□ -0.29
HPS3-202ENST00000460120 CD28P10747 220 aa13.27□□□□□ -0.29
HPS3-202ENST00000460120 RRN3P1Q2M238 152 aa13.27□□□□□ -0.29
HPS3-202ENST00000460120 C20orf203Q8NBC4 194 aa13.27□□□□□ -0.29
HPS3-202ENST00000460120 PEMTQ9UBM1 199 aa13.27□□□□□ -0.29
HPS3-202ENST00000460120 ADARB2-AS1A8MUL3 147 aa13.26□□□□□ -0.29
HPS3-202ENST00000460120 LOC107984156A0A0G2JMH3 177 aa13.26□□□□□ -0.29
HPS3-202ENST00000460120 ARL17AQ8IVW1 177 aa13.26□□□□□ -0.29
HPS3-202ENST00000460120 NACAE9PAV3 2078 aa13.26□□□□□ -0.29
HPS3-202ENST00000460120 LGALS3P17931 250 aaKnown RBP13.26□□□□□ -0.29
HPS3-202ENST00000460120 SH2D6Q7Z4S9 175 aa13.26□□□□□ -0.29
HPS3-202ENST00000460120 RNF152Q8N8N0 203 aa13.26□□□□□ -0.29
HPS3-202ENST00000460120 GTSF1LQ9H1H1 148 aa13.26□□□□□ -0.29
HPS3-202ENST00000460120 VCX2Q9H322 139 aa13.26□□□□□ -0.29
HPS3-202ENST00000460120 TNFRSF18Q9Y5U5 241 aa13.26□□□□□ -0.29
HPS3-202ENST00000460120 A0A0J9YY99 117 aa13.25□□□□□ -0.29
HPS3-202ENST00000460120 J3QQQ9 107 aa13.25□□□□□ -0.29
HPS3-202ENST00000460120 AZU1P20160 251 aa13.25□□□□□ -0.29
HPS3-202ENST00000460120 SMAGPQ0VAQ4 97 aa13.25□□□□□ -0.29
HPS3-202ENST00000460120 NSUN5P1Q3KNT7 163 aa13.25□□□□□ -0.29
HPS3-202ENST00000460120 PAPPA-AS1Q5QFB9 102 aa13.25□□□□□ -0.29
HPS3-202ENST00000460120 C4orf3Q8WVX3 66 aa13.25□□□□□ -0.29
HPS3-202ENST00000460120 IGLV4-3A0A075B6K6 122 aa13.24□□□□□ -0.29
HPS3-202ENST00000460120 MTORP42345 2549 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms