RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TRBV30A0A0K0K1B3 111 aa8.99□□□□□ -0.97
PTCH1-209ENST00000437951 NUPR1O60356 82 aa8.99□□□□□ -0.97
PTCH1-209ENST00000437951 B9D2Q9BPU9 175 aa8.98□□□□□ -0.97
PTCH1-209ENST00000437951 COL8A2P25067 703 aa8.98□□□□□ -0.97
PTCH1-209ENST00000437951 MYO18BQ8IUG5 2567 aa8.98□□□□□ -0.97
PTCH1-209ENST00000437951 LINC00173Q6ZV60 143 aa8.98□□□□□ -0.97
PTCH1-209ENST00000437951 PCNX3Q9H6A9 2034 aa8.98□□□□□ -0.97
PTCH1-209ENST00000437951 IGKV1OR2-108A0A075B7D4 117 aa8.97□□□□□ -0.97
PTCH1-209ENST00000437951 H7C423 109 aa8.97□□□□□ -0.97
PTCH1-209ENST00000437951 PIK3CD-AS1Q5SR53 167 aa8.97□□□□□ -0.97
PTCH1-209ENST00000437951 SPRY4Q9C004 299 aa8.97□□□□□ -0.97
PTCH1-209ENST00000437951 FAM19A3Q7Z5A8 133 aa8.97□□□□□ -0.97
PTCH1-209ENST00000437951 C5orf24Q7Z6I8 188 aa8.97□□□□□ -0.97
PTCH1-209ENST00000437951 VPREB1P12018 145 aa8.97□□□□□ -0.97
PTCH1-209ENST00000437951 NCR3O14931 201 aa8.97□□□□□ -0.97
PTCH1-209ENST00000437951 IGLV3-1P01715 115 aa8.97□□□□□ -0.97
PTCH1-209ENST00000437951 RBX1P62877 108 aa8.97□□□□□ -0.97
PTCH1-209ENST00000437951 KLK5Q9Y337 293 aaPredicted RBP8.97□□□□□ -0.97
PTCH1-209ENST00000437951 WFDC11Q8NEX6 87 aa8.96□□□□□ -0.97
PTCH1-209ENST00000437951 CCL18P55774 89 aa8.96□□□□□ -0.97
PTCH1-209ENST00000437951 SEM1Q6ZVN7 128 aa8.96□□□□□ -0.97
PTCH1-209ENST00000437951 MIR7-3HGQ8N6C7 128 aa8.96□□□□□ -0.98
PTCH1-209ENST00000437951 NPBQ8NG41 125 aa8.96□□□□□ -0.98
PTCH1-209ENST00000437951 ENHOQ6UWT2 76 aa8.96□□□□□ -0.98
PTCH1-209ENST00000437951 ASPHD1Q5U4P2 390 aa8.96□□□□□ -0.98
PTCH1-209ENST00000437951 G3V318 75 aa8.95□□□□□ -0.98
PTCH1-209ENST00000437951 IGHV3-30-3P0DP02 117 aa8.95□□□□□ -0.98
PTCH1-209ENST00000437951 C17orf82Q86X59 251 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-209ENST00000437951 E7EQL1 145 aa8.95□□□□□ -0.98
PTCH1-209ENST00000437951 GYPEP15421 78 aa8.95□□□□□ -0.98
PTCH1-209ENST00000437951 GATA1P15976 413 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-209ENST00000437951 IL17DQ8TAD2 202 aa8.94□□□□□ -0.98
PTCH1-209ENST00000437951 IGKV2D-26A0A0A0MRZ7 120 aa8.94□□□□□ -0.98
PTCH1-209ENST00000437951 NFE4Q86UQ8 179 aa8.94□□□□□ -0.98
PTCH1-209ENST00000437951 NOTCH4Q99466 2003 aa8.94□□□□□ -0.98
PTCH1-209ENST00000437951 CENPVL3A0A0U1RRI6 287 aa8.94□□□□□ -0.98
PTCH1-209ENST00000437951 C2orf70A6NJV1 201 aa8.94□□□□□ -0.98
PTCH1-209ENST00000437951 Q6ZQT7 251 aa8.94□□□□□ -0.98
PTCH1-209ENST00000437951 LOXP28300 417 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-209ENST00000437951 HOXB4P17483 251 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-209ENST00000437951 Q0VFX4 171 aa8.93□□□□□ -0.98
PTCH1-209ENST00000437951 UFSP1Q6NVU6 142 aa8.93□□□□□ -0.98
PTCH1-209ENST00000437951 TRBV10-1A0A0K0K1A3 114 aa8.93□□□□□ -0.98
PTCH1-209ENST00000437951 C9orf66Q5T8R8 295 aa8.93□□□□□ -0.98
PTCH1-209ENST00000437951 RETNQ9HD89 108 aa8.93□□□□□ -0.98
PTCH1-209ENST00000437951 DAND5Q8N907 189 aa8.93□□□□□ -0.98
PTCH1-209ENST00000437951 C17orf77Q96MU5 243 aa8.93□□□□□ -0.98
PTCH1-209ENST00000437951 SPART-AS1P0CW21 52 aa8.92□□□□□ -0.98
PTCH1-209ENST00000437951 SMIM9A6NGZ8 99 aa8.92□□□□□ -0.98
PTCH1-209ENST00000437951 Q9HAA7 133 aa8.92□□□□□ -0.98
PTCH1-209ENST00000437951 SPAG11BQ08648 103 aa8.92□□□□□ -0.98
PTCH1-209ENST00000437951 C14orf177Q52M58 125 aa8.92□□□□□ -0.98
PTCH1-209ENST00000437951 PMAIP1Q13794 54 aa8.92□□□□□ -0.98
PTCH1-209ENST00000437951 RPL39P62891 51 aaKnown RBP8.91□□□□□ -0.98
PTCH1-209ENST00000437951 TPSG1Q9NRR2 321 aa8.91□□□□□ -0.98
PTCH1-209ENST00000437951 I3L2K1 104 aa8.91□□□□□ -0.98
PTCH1-209ENST00000437951 RUSC1-AS1Q66K80 236 aa8.91□□□□□ -0.98
PTCH1-209ENST00000437951 RNF138Q8WVD3 245 aa8.91□□□□□ -0.98
PTCH1-209ENST00000437951 IGLV1-44P01699 117 aa8.91□□□□□ -0.98
PTCH1-209ENST00000437951 C20orf203Q8NBC4 194 aa8.91□□□□□ -0.98
PTCH1-209ENST00000437951 A0A1B0GXF2 115 aa8.91□□□□□ -0.98
PTCH1-209ENST00000437951 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
PTCH1-209ENST00000437951 FAM167A-AS1Q96KT0 104 aa8.9□□□□□ -0.98
PTCH1-209ENST00000437951 C19orf71A6NCJ1 209 aa8.9□□□□□ -0.98
PTCH1-209ENST00000437951 LTBP1Q14766 1721 aa8.9□□□□□ -0.98
PTCH1-209ENST00000437951 ZNRD1Q9P1U0 126 aa8.9□□□□□ -0.98
PTCH1-209ENST00000437951 HHLA3Q9XRX5 114 aa8.9□□□□□ -0.98
PTCH1-209ENST00000437951 MLST8Q9BVC4 326 aa8.9□□□□□ -0.99
PTCH1-209ENST00000437951 TP73-AS1Q9UF72 201 aa8.9□□□□□ -0.99
PTCH1-209ENST00000437951 IGLV3-9A0A075B6K5 115 aa8.9□□□□□ -0.99
PTCH1-209ENST00000437951 A0A096LPF7 62 aa8.89□□□□□ -0.99
PTCH1-209ENST00000437951 K7EMT4 169 aa8.89□□□□□ -0.99
PTCH1-209ENST00000437951 M0QXV9 152 aa8.89□□□□□ -0.99
PTCH1-209ENST00000437951 IGLV11-55A0A075B6I3 123 aa8.89□□□□□ -0.99
PTCH1-209ENST00000437951 K7ENP7 123 aa8.89□□□□□ -0.99
PTCH1-209ENST00000437951 IBA57-AS1B1ANH7 110 aa8.89□□□□□ -0.99
PTCH1-209ENST00000437951 LINC00694P0DN24 101 aa8.89□□□□□ -0.99
PTCH1-209ENST00000437951 Q6JHZ5 121 aa8.89□□□□□ -0.99
PTCH1-209ENST00000437951 MAPK1IP1LQ8NDC0 245 aa8.89□□□□□ -0.99
PTCH1-209ENST00000437951 IGHV4OR15-8A0A075B7B6 117 aa8.88□□□□□ -0.99
PTCH1-209ENST00000437951 A0A087WW49 117 aa8.88□□□□□ -0.99
PTCH1-209ENST00000437951 TRAV7A0A075B6U4 112 aa8.88□□□□□ -0.99
PTCH1-209ENST00000437951 CCL24O00175 119 aa8.88□□□□□ -0.99
PTCH1-209ENST00000437951 ODF3Q96PU9 254 aa8.88□□□□□ -0.99
PTCH1-209ENST00000437951 CCDC179H3BU77 68 aa8.88□□□□□ -0.99
PTCH1-209ENST00000437951 NEXN-AS1Q8NBZ9 246 aa8.88□□□□□ -0.99
PTCH1-209ENST00000437951 TMEM89A2RUT3 159 aa8.88□□□□□ -0.99
PTCH1-209ENST00000437951 Q6ZR03 302 aa8.88□□□□□ -0.99
PTCH1-209ENST00000437951 VPREB3Q9UKI3 123 aa8.88□□□□□ -0.99
PTCH1-209ENST00000437951 Q8N9L7 120 aa8.87□□□□□ -0.99
PTCH1-209ENST00000437951 LYPD6Q86Y78 171 aa8.87□□□□□ -0.99
PTCH1-209ENST00000437951 RAI1Q7Z5J4 1906 aaPredicted RBP8.87□□□□□ -0.99
PTCH1-209ENST00000437951 TRBV27A0A0K0K1C4 114 aa8.87□□□□□ -0.99
PTCH1-209ENST00000437951 MIFP14174 115 aa8.87□□□□□ -0.99
PTCH1-209ENST00000437951 TMEM223A0PJW6 202 aa8.86□□□□□ -0.99
PTCH1-209ENST00000437951 K7EIM0 57 aa8.86□□□□□ -0.99
PTCH1-209ENST00000437951 TRIAP1O43715 76 aa8.86□□□□□ -0.99
PTCH1-209ENST00000437951 A0A0J9YY99 117 aa8.86□□□□□ -0.99
PTCH1-209ENST00000437951 CFAP126Q5VTH2 177 aa8.86□□□□□ -0.99
PTCH1-209ENST00000437951 TMEM263Q8WUH6 116 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms