RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 OR10AG1Q8NH19 301 aa6.18□□□□□ -1.42
SMC1A-203ENST00000428014 SAMD10Q9BYL1 202 aa6.18□□□□□ -1.42
SMC1A-203ENST00000428014 LOC100131303A0A0U1RQF7 123 aa6.17□□□□□ -1.42
SMC1A-203ENST00000428014 A8MWL6 223 aa6.17□□□□□ -1.42
SMC1A-203ENST00000428014 SRP19P09132 144 aaKnown RBP6.17□□□□□ -1.42
SMC1A-203ENST00000428014 ERVFC1-1P60608 527 aa6.17□□□□□ -1.42
SMC1A-203ENST00000428014 OR10J3Q5JRS4 329 aa6.17□□□□□ -1.42
SMC1A-203ENST00000428014 Q6ZSN1 163 aa6.17□□□□□ -1.42
SMC1A-203ENST00000428014 NUDT10Q8NFP7 164 aa6.17□□□□□ -1.42
SMC1A-203ENST00000428014 OCC1Q8TAD7 63 aa6.17□□□□□ -1.42
SMC1A-203ENST00000428014 NTN5Q8WTR8 489 aaPredicted RBP6.17□□□□□ -1.42
SMC1A-203ENST00000428014 NUDT11Q96G61 164 aa6.17□□□□□ -1.42
SMC1A-203ENST00000428014 TM2D2Q9BX73 214 aa6.17□□□□□ -1.42
SMC1A-203ENST00000428014 RPP21Q9H633 154 aaKnown RBP6.17□□□□□ -1.42
SMC1A-203ENST00000428014 JPT2Q9H910 190 aa6.17□□□□□ -1.42
SMC1A-203ENST00000428014 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
SMC1A-203ENST00000428014 TMSB15BA0A087X1C1 80 aa6.16□□□□□ -1.42
SMC1A-203ENST00000428014 RPL19P84098 196 aaKnown RBP6.16□□□□□ -1.42
SMC1A-203ENST00000428014 FAM74A4Q5TZK3 123 aa6.16□□□□□ -1.42
SMC1A-203ENST00000428014 ATRAIDQ6UW56 229 aa6.16□□□□□ -1.42
SMC1A-203ENST00000428014 C14orf178Q8N769 122 aaPredicted RBP6.16□□□□□ -1.42
SMC1A-203ENST00000428014 PGLYRP4Q96LB8 373 aa6.16□□□□□ -1.42
SMC1A-203ENST00000428014 DPH3P1Q9H4G8 78 aa6.16□□□□□ -1.42
SMC1A-203ENST00000428014 OSTCQ9NRP0 149 aa6.16□□□□□ -1.42
SMC1A-203ENST00000428014 PKD1P98161 4303 aa6.16□□□□□ -1.42
SMC1A-203ENST00000428014 DNAH11Q96DT5 4516 aa6.16□□□□□ -1.42
SMC1A-203ENST00000428014 A0A087WWL8 130 aa6.15□□□□□ -1.42
SMC1A-203ENST00000428014 TRBV6-8A0A0A6YYG3 113 aa6.15□□□□□ -1.42
SMC1A-203ENST00000428014 IGHV3-73A0A0B4J1V6 119 aa6.15□□□□□ -1.42
SMC1A-203ENST00000428014 K7EN84 100 aa6.15□□□□□ -1.42
SMC1A-203ENST00000428014 M0QY20 66 aa6.15□□□□□ -1.42
SMC1A-203ENST00000428014 SRSF3P84103 164 aaKnown RBP6.15□□□□□ -1.42
SMC1A-203ENST00000428014 LINC01551Q86U37 167 aa6.15□□□□□ -1.42
SMC1A-203ENST00000428014 NIT1Q86X76 327 aa6.15□□□□□ -1.42
SMC1A-203ENST00000428014 NEXN-AS1Q8NBZ9 246 aa6.15□□□□□ -1.42
SMC1A-203ENST00000428014 RMI2Q96E14 147 aa6.15□□□□□ -1.42
SMC1A-203ENST00000428014 SMIM7Q9BQ49 75 aa6.15□□□□□ -1.42
SMC1A-203ENST00000428014 TMEM218A2RU14 115 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 GAGE12JA6NER3 117 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 CEBPGP53567 150 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 Q0VG73 95 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 GAGE1Q13065 139 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 GAGE4Q13068 117 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 GAGE5Q13069 117 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 ZNF56Q15929 161 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 IQCJQ1A5X6 159 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 GAGE13Q4V321 117 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 TSKUQ8WUA8 353 aa6.14□□□□□ -1.43
SMC1A-203ENST00000428014 A0A087WTM6 91 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 A0A1B0GUV1 79 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 ZNF727A8MUV8 499 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 C9JQL5 133 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 NTF3P20783 257 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 KCNIP4Q6PIL6 250 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 RASL11AQ6T310 242 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 LYZL1Q6UWQ5 148 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 SMIM15Q7Z3B0 74 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 SEC11CQ9BY50 192 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 NIT2Q9NQR4 276 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 URGCP-MRPS24S4R325 110 aa6.13□□□□□ -1.43
SMC1A-203ENST00000428014 A0A1B0GW15 77 aa6.12□□□□□ -1.43
SMC1A-203ENST00000428014 LRCOL1A6NCL2 159 aa6.12□□□□□ -1.43
SMC1A-203ENST00000428014 C16orf90A8MZG2 172 aa6.12□□□□□ -1.43
SMC1A-203ENST00000428014 F8W036 122 aa6.12□□□□□ -1.43
SMC1A-203ENST00000428014 GATCO43716 136 aaKnown RBP6.12□□□□□ -1.43
SMC1A-203ENST00000428014 NCR2O95944 276 aa6.12□□□□□ -1.43
SMC1A-203ENST00000428014 PNRC1Q12796 327 aaPredicted RBP6.12□□□□□ -1.43
SMC1A-203ENST00000428014 TMEM241Q24JQ0 296 aa6.12□□□□□ -1.43
SMC1A-203ENST00000428014 C15orf54Q8N8G6 183 aa6.12□□□□□ -1.43
SMC1A-203ENST00000428014 NAT8Q9UHE5 227 aa6.12□□□□□ -1.43
SMC1A-203ENST00000428014 TRBV25-1A0A075B6N4 114 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 A0A087WX48 190 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 TRBV6-5A0A0K0K1A5 114 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 F5H697 171 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 H7C423 109 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 PPP1R17O96001 155 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 SPATA12Q7Z6I5 190 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 SLC7A5P1Q8MH63 180 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 GTSF1Q8WW33 167 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 BORCS7Q96B45 105 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 TMEM191AQ9H0A3 160 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 RNASE7Q9H1E1 156 aaKnown RBP6.11□□□□□ -1.43
SMC1A-203ENST00000428014 PRR34Q9NV39 138 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 Q9UF83 564 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 CARHSP1Q9Y2V2 147 aaKnown RBP6.11□□□□□ -1.43
SMC1A-203ENST00000428014 TNFRSF18Q9Y5U5 241 aa6.11□□□□□ -1.43
SMC1A-203ENST00000428014 A0A1B0GUT8 65 aa6.1□□□□□ -1.43
SMC1A-203ENST00000428014 GZMBP10144 247 aa6.1□□□□□ -1.43
SMC1A-203ENST00000428014 ADCYAP1P18509 176 aa6.1□□□□□ -1.43
SMC1A-203ENST00000428014 MIAQ16674 131 aa6.1□□□□□ -1.43
SMC1A-203ENST00000428014 C10orf91Q5T1B1 145 aa6.1□□□□□ -1.43
SMC1A-203ENST00000428014 ISOC2Q96AB3 205 aa6.1□□□□□ -1.43
SMC1A-203ENST00000428014 TRAV8-4A0A0B4J246 113 aa6.09□□□□□ -1.43
SMC1A-203ENST00000428014 IGHV1-24A0A0C4DH33 117 aa6.09□□□□□ -1.43
SMC1A-203ENST00000428014 PSCAO43653 123 aa6.09□□□□□ -1.43
SMC1A-203ENST00000428014 RPL23P62829 140 aaKnown RBP6.09□□□□□ -1.43
SMC1A-203ENST00000428014 TWIST1Q15672 202 aa6.09□□□□□ -1.43
SMC1A-203ENST00000428014 C14orf177Q52M58 125 aa6.09□□□□□ -1.43
SMC1A-203ENST00000428014 SUMO4Q6EEV6 95 aa6.09□□□□□ -1.43
SMC1A-203ENST00000428014 TPPP3Q9BW30 176 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms