RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 UFSP1Q6NVU6 142 aa12.48□□□□□ -0.41
FN1-208ENST00000426059 IGHV3-53P01767 116 aa12.47□□□□□ -0.41
FN1-208ENST00000426059 HBDP02042 147 aa12.47□□□□□ -0.41
FN1-208ENST00000426059 IGHV4-30-4P0DP06 118 aa12.47□□□□□ -0.41
FN1-208ENST00000426059 DEFB135Q30KP9 77 aa12.47□□□□□ -0.41
FN1-208ENST00000426059 C16orf74Q96GX8 76 aa12.47□□□□□ -0.41
FN1-208ENST00000426059 C18orf15Q96N68 181 aa12.47□□□□□ -0.41
FN1-208ENST00000426059 C20orf78Q9BR46 151 aa12.47□□□□□ -0.41
FN1-208ENST00000426059 ST20Q9HBF5 79 aa12.47□□□□□ -0.41
FN1-208ENST00000426059 LINC01546A6NGU7 62 aa12.46□□□□□ -0.41
FN1-208ENST00000426059 ATOH7Q8N100 152 aa12.45□□□□□ -0.42
FN1-208ENST00000426059 G3V4G9 280 aa12.45□□□□□ -0.42
FN1-208ENST00000426059 LAGE3Q14657 143 aa12.45□□□□□ -0.42
FN1-208ENST00000426059 PTH2Q96A98 100 aa12.45□□□□□ -0.42
FN1-208ENST00000426059 ZNF479Q96JC4 524 aa12.45□□□□□ -0.42
FN1-208ENST00000426059 TMEM70Q9BUB7 260 aa12.45□□□□□ -0.42
FN1-208ENST00000426059 SDHAF1A6NFY7 115 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 NOTCH1P46531 2555 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 ANK2Q01484 3957 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 GAGE12BA1L429 117 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 RS1O15537 224 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 DLEU1O43261 78 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 GAGE7O76087 117 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 GAGE12FP0CL80 117 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 GAGE12GP0CL81 117 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 GAGE12IP0CL82 117 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 FCER1GP30273 86 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 PIK3CD-AS1Q5SR53 167 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 HSPB8Q9UJY1 196 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 X6R8D5 127 aa12.44□□□□□ -0.42
FN1-208ENST00000426059 SYS1-DBNDD2H3BUS1 97 aa12.43□□□□□ -0.42
FN1-208ENST00000426059 PPP1R17O96001 155 aa12.43□□□□□ -0.42
FN1-208ENST00000426059 POLR2KP53803 58 aaKnown RBP12.43□□□□□ -0.42
FN1-208ENST00000426059 MRPL52Q86TS9 123 aaKnown RBP12.43□□□□□ -0.42
FN1-208ENST00000426059 OR4C5Q8NGB2 326 aa12.43□□□□□ -0.42
FN1-208ENST00000426059 PMCHL2Q9BQD1 86 aa12.43□□□□□ -0.42
FN1-208ENST00000426059 MDFIQ99750 246 aa12.43□□□□□ -0.42
FN1-208ENST00000426059 NUDT3O95989 172 aa12.42□□□□□ -0.42
FN1-208ENST00000426059 DAZ2Q13117 558 aaKnown RBP12.42□□□□□ -0.42
FN1-208ENST00000426059 MAP1LC3CQ9BXW4 147 aa12.42□□□□□ -0.42
FN1-208ENST00000426059 DEFB4AO15263 64 aa12.42□□□□□ -0.42
FN1-208ENST00000426059 APOC4P55056 127 aa12.41□□□□□ -0.42
FN1-208ENST00000426059 GAGE1Q13065 139 aa12.41□□□□□ -0.42
FN1-208ENST00000426059 MIEN1Q9BRT3 115 aa12.41□□□□□ -0.42
FN1-208ENST00000426059 TRGV2A0A075B6R0 118 aa12.4□□□□□ -0.42
FN1-208ENST00000426059 NPSP0C0P6 89 aa12.4□□□□□ -0.42
FN1-208ENST00000426059 LGALS9BQ3B8N2 356 aa12.4□□□□□ -0.42
FN1-208ENST00000426059 MAJINQ3KP22 176 aa12.4□□□□□ -0.42
FN1-208ENST00000426059 KIR2DL5BQ8NHK3 375 aa12.4□□□□□ -0.42
FN1-208ENST00000426059 TRBV6-5A0A0K0K1A5 114 aa12.4□□□□□ -0.43
FN1-208ENST00000426059 EGFEM1PQ0D2K5 195 aa12.4□□□□□ -0.43
FN1-208ENST00000426059 TEX43Q6ZNM6 134 aa12.4□□□□□ -0.43
FN1-208ENST00000426059 RHODO00212 210 aa12.39□□□□□ -0.43
FN1-208ENST00000426059 VCYO14598 125 aa12.39□□□□□ -0.43
FN1-208ENST00000426059 RIPPLY3P57055 190 aa12.39□□□□□ -0.43
FN1-208ENST00000426059 IFI27L1Q96BM0 104 aa12.39□□□□□ -0.43
FN1-208ENST00000426059 OVOL2Q9BRP0 275 aa12.39□□□□□ -0.43
FN1-208ENST00000426059 DEFB130BP0DP73 79 aa12.38□□□□□ -0.43
FN1-208ENST00000426059 DEFB130AP0DP74 79 aa12.38□□□□□ -0.43
FN1-208ENST00000426059 OR11H2Q8NH07 326 aa12.38□□□□□ -0.43
FN1-208ENST00000426059 PAM16Q9Y3D7 125 aa12.38□□□□□ -0.43
FN1-208ENST00000426059 TRBV27A0A0K0K1C4 114 aa12.38□□□□□ -0.43
FN1-208ENST00000426059 H7C1H1 209 aa12.38□□□□□ -0.43
FN1-208ENST00000426059 ORMDL2Q53FV1 153 aa12.38□□□□□ -0.43
FN1-208ENST00000426059 CBY1Q9Y3M2 126 aa12.38□□□□□ -0.43
FN1-208ENST00000426059 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
FN1-208ENST00000426059 KIR2DL4Q99706 377 aa12.37□□□□□ -0.43
FN1-208ENST00000426059 NBEAL1Q6ZS30 2694 aa12.37□□□□□ -0.43
FN1-208ENST00000426059 TRAV4A0A0B4J268 109 aa12.37□□□□□ -0.43
FN1-208ENST00000426059 ZFP2Q6ZN57 461 aa12.37□□□□□ -0.43
FN1-208ENST00000426059 VAMP8Q9BV40 100 aa12.37□□□□□ -0.43
FN1-208ENST00000426059 TNFRSF18Q9Y5U5 241 aa12.37□□□□□ -0.43
FN1-208ENST00000426059 PRB2P02812 416 aaPredicted RBP12.36□□□□□ -0.43
FN1-208ENST00000426059 RPL32P62910 135 aaKnown RBP12.36□□□□□ -0.43
FN1-208ENST00000426059 C2orf66Q6UXQ4 117 aa12.36□□□□□ -0.43
FN1-208ENST00000426059 IGHV3-38A0A0C4DH36 116 aa12.36□□□□□ -0.43
FN1-208ENST00000426059 RPL39P62891 51 aaKnown RBP12.36□□□□□ -0.43
FN1-208ENST00000426059 BATFQ16520 125 aa12.36□□□□□ -0.43
FN1-208ENST00000426059 EDA2RQ9HAV5 297 aa12.36□□□□□ -0.43
FN1-208ENST00000426059 PET117Q6UWS5 81 aa12.35□□□□□ -0.43
FN1-208ENST00000426059 PHLDA1Q8WV24 401 aaPredicted RBP12.35□□□□□ -0.43
FN1-208ENST00000426059 SLC25A29Q8N8R3 303 aa12.35□□□□□ -0.43
FN1-208ENST00000426059 TSHBP01222 138 aa12.34□□□□□ -0.43
FN1-208ENST00000426059 TOMM6Q96B49 74 aa12.34□□□□□ -0.43
FN1-208ENST00000426059 IGHV4-28A0A0C4DH34 117 aa12.34□□□□□ -0.43
FN1-208ENST00000426059 SMIM9A6NGZ8 99 aa12.34□□□□□ -0.43
FN1-208ENST00000426059 I3L3M4 83 aa12.34□□□□□ -0.43
FN1-208ENST00000426059 PRSS1P07477 247 aa12.34□□□□□ -0.43
FN1-208ENST00000426059 TP53TG1Q9Y2A0 90 aa12.34□□□□□ -0.43
FN1-208ENST00000426059 FAM222AQ5U5X8 452 aa12.33□□□□□ -0.44
FN1-208ENST00000426059 LINC01545Q5VT33 79 aa12.33□□□□□ -0.44
FN1-208ENST00000426059 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
FN1-208ENST00000426059 SCGB3A1Q96QR1 104 aa12.33□□□□□ -0.44
FN1-208ENST00000426059 MGAM2Q2M2H8 2515 aa12.33□□□□□ -0.44
FN1-208ENST00000426059 K7EMI3 77 aa12.33□□□□□ -0.44
FN1-208ENST00000426059 RETNQ9HD89 108 aa12.33□□□□□ -0.44
FN1-208ENST00000426059 DKK2Q9UBU2 259 aa12.33□□□□□ -0.44
FN1-208ENST00000426059 DNAH3Q8TD57 4116 aa12.32□□□□□ -0.44
FN1-208ENST00000426059 SAMD5Q5TGI4 173 aa12.32□□□□□ -0.44
FN1-208ENST00000426059 RNF183Q96D59 192 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 1045 ms