RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 NTM-AS1Q6ZSK4 140 aa12□□□□□ -0.49
AC004540.1-203ENST00000421862 C9orf163Q8N9P6 203 aa12□□□□□ -0.49
AC004540.1-203ENST00000421862 STOML3Q8TAV4 291 aa12□□□□□ -0.49
AC004540.1-203ENST00000421862 ZNF471Q9BX82 626 aaPredicted RBP12□□□□□ -0.49
AC004540.1-203ENST00000421862 TMEM97Q5BJF2 176 aa11.99□□□□□ -0.49
AC004540.1-203ENST00000421862 CHCHD5Q9BSY4 110 aa11.99□□□□□ -0.49
AC004540.1-203ENST00000421862 KIF25-AS1Q9Y6Z4 181 aa11.99□□□□□ -0.49
AC004540.1-203ENST00000421862 PAGE4O60829 102 aa11.98□□□□□ -0.49
AC004540.1-203ENST00000421862 S100A9P06702 114 aaKnown RBP11.98□□□□□ -0.49
AC004540.1-203ENST00000421862 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.98□□□□□ -0.49
AC004540.1-203ENST00000421862 DAZAP1Q96EP5 407 aaKnown RBP11.98□□□□□ -0.49
AC004540.1-203ENST00000421862 SCO2A0A1W2PP80 73 aa11.97□□□□□ -0.49
AC004540.1-203ENST00000421862 ARPC5O15511 151 aa11.97□□□□□ -0.49
AC004540.1-203ENST00000421862 PLA2G2DQ9UNK4 145 aa11.97□□□□□ -0.49
AC004540.1-203ENST00000421862 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.97□□□□□ -0.49
AC004540.1-203ENST00000421862 RBX1P62877 108 aa11.96□□□□□ -0.49
AC004540.1-203ENST00000421862 PANO1I0J062 215 aa11.95□□□□□ -0.5
AC004540.1-203ENST00000421862 CIRBPQ14011 172 aaKnown RBP11.95□□□□□ -0.5
AC004540.1-203ENST00000421862 IQCJQ1A5X6 159 aa11.95□□□□□ -0.5
AC004540.1-203ENST00000421862 SPANXN1Q5VSR9 72 aa11.95□□□□□ -0.5
AC004540.1-203ENST00000421862 MBD3L1Q8WWY6 194 aa11.95□□□□□ -0.5
AC004540.1-203ENST00000421862 AP1S3Q96PC3 154 aa11.95□□□□□ -0.5
AC004540.1-203ENST00000421862 TRBV25-1A0A075B6N4 114 aa11.94□□□□□ -0.5
AC004540.1-203ENST00000421862 CLPSL2Q6UWE3 100 aa11.94□□□□□ -0.5
AC004540.1-203ENST00000421862 BAGE2Q86Y30 109 aa11.94□□□□□ -0.5
AC004540.1-203ENST00000421862 LINC00269Q8N2A0 174 aa11.94□□□□□ -0.5
AC004540.1-203ENST00000421862 MUC21A0A0G2JKD1 596 aa11.93□□□□□ -0.5
AC004540.1-203ENST00000421862 MUC21A0A140T8X8 626 aa11.93□□□□□ -0.5
AC004540.1-203ENST00000421862 CNBPP62633 177 aaKnown RBP11.93□□□□□ -0.5
AC004540.1-203ENST00000421862 ZNF345Q14585 488 aa11.93□□□□□ -0.5
AC004540.1-203ENST00000421862 SDIM1Q6ZPB5 146 aa11.93□□□□□ -0.5
AC004540.1-203ENST00000421862 DERL1Q9BUN8 251 aa11.93□□□□□ -0.5
AC004540.1-203ENST00000421862 F5H697 171 aa11.92□□□□□ -0.5
AC004540.1-203ENST00000421862 PFDN1O60925 122 aa11.92□□□□□ -0.5
AC004540.1-203ENST00000421862 MT1HL1P0DM35 61 aa11.92□□□□□ -0.5
AC004540.1-203ENST00000421862 GAGE6Q13070 117 aa11.92□□□□□ -0.5
AC004540.1-203ENST00000421862 CLRN3Q8NCR9 226 aa11.92□□□□□ -0.5
AC004540.1-203ENST00000421862 SFT2D1Q8WV19 159 aa11.92□□□□□ -0.5
AC004540.1-203ENST00000421862 UMAD1C9J7I0 102 aa11.91□□□□□ -0.5
AC004540.1-203ENST00000421862 KCNRGQ8N5I3 272 aa11.91□□□□□ -0.5
AC004540.1-203ENST00000421862 FAM213BQ8TBF2 198 aa11.91□□□□□ -0.5
AC004540.1-203ENST00000421862 IGHV1-24A0A0C4DH33 117 aa11.9□□□□□ -0.5
AC004540.1-203ENST00000421862 M0QY20 66 aa11.9□□□□□ -0.5
AC004540.1-203ENST00000421862 IGLC6P0CF74 106 aa11.9□□□□□ -0.5
AC004540.1-203ENST00000421862 SMIM17P0DL12 118 aa11.9□□□□□ -0.5
AC004540.1-203ENST00000421862 REG3AQ06141 175 aa11.9□□□□□ -0.5
AC004540.1-203ENST00000421862 C20orf203Q8NBC4 194 aa11.9□□□□□ -0.5
AC004540.1-203ENST00000421862 C11orf52Q96A22 123 aa11.89□□□□□ -0.51
AC004540.1-203ENST00000421862 A0A1B0GV50 99 aa11.88□□□□□ -0.51
AC004540.1-203ENST00000421862 RPL35P42766 123 aaKnown RBP11.88□□□□□ -0.51
AC004540.1-203ENST00000421862 TRAV8-4A0A0B4J246 113 aa11.87□□□□□ -0.51
AC004540.1-203ENST00000421862 A0A1B0GUV1 79 aa11.87□□□□□ -0.51
AC004540.1-203ENST00000421862 H7C1H1 209 aa11.87□□□□□ -0.51
AC004540.1-203ENST00000421862 P01737 135 aa11.87□□□□□ -0.51
AC004540.1-203ENST00000421862 SUMO4Q6EEV6 95 aa11.87□□□□□ -0.51
AC004540.1-203ENST00000421862 Q6ZRU5 148 aa11.87□□□□□ -0.51
AC004540.1-203ENST00000421862 TMUB2Q71RG4 321 aa11.87□□□□□ -0.51
AC004540.1-203ENST00000421862 IGLV10-54A0A075B6I4 117 aa11.86□□□□□ -0.51
AC004540.1-203ENST00000421862 A0A0D9SG52 128 aa11.86□□□□□ -0.51
AC004540.1-203ENST00000421862 SMLR1H3BR10 107 aa11.86□□□□□ -0.51
AC004540.1-203ENST00000421862 PGLYRP4Q96LB8 373 aa11.86□□□□□ -0.51
AC004540.1-203ENST00000421862 GFRA4Q9GZZ7 299 aa11.86□□□□□ -0.51
AC004540.1-203ENST00000421862 IGLV4-60A0A075B6I1 120 aa11.85□□□□□ -0.51
AC004540.1-203ENST00000421862 hDV102S1A0JD36 115 aa11.85□□□□□ -0.51
AC004540.1-203ENST00000421862 MGPP08493 103 aa11.85□□□□□ -0.51
AC004540.1-203ENST00000421862 H2AFB1P0C5Y9 115 aa11.85□□□□□ -0.51
AC004540.1-203ENST00000421862 SSTP61278 116 aa11.85□□□□□ -0.51
AC004540.1-203ENST00000421862 RGS21Q2M5E4 152 aa11.85□□□□□ -0.51
AC004540.1-203ENST00000421862 FER1L6-AS1Q8NA97 138 aa11.85□□□□□ -0.51
AC004540.1-203ENST00000421862 RNF185Q96GF1 192 aa11.85□□□□□ -0.51
AC004540.1-203ENST00000421862 C19orf71A6NCJ1 209 aa11.84□□□□□ -0.51
AC004540.1-203ENST00000421862 BCL2L11O43521 198 aa11.84□□□□□ -0.51
AC004540.1-203ENST00000421862 SLPIP03973 132 aa11.84□□□□□ -0.51
AC004540.1-203ENST00000421862 GZMBP10144 247 aa11.84□□□□□ -0.51
AC004540.1-203ENST00000421862 SPACA4Q8TDM5 124 aa11.84□□□□□ -0.51
AC004540.1-203ENST00000421862 TMEM243Q9BU79 118 aa11.84□□□□□ -0.51
AC004540.1-203ENST00000421862 MANBALQ9NQG1 85 aa11.84□□□□□ -0.51
AC004540.1-203ENST00000421862 TNXBP22105 4242 aa11.84□□□□□ -0.51
AC004540.1-203ENST00000421862 IGHV3-64A0A075B6Q5 118 aa11.83□□□□□ -0.52
AC004540.1-203ENST00000421862 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
AC004540.1-203ENST00000421862 RPS20P60866 119 aaKnown RBP11.83□□□□□ -0.52
AC004540.1-203ENST00000421862 CACNG7P62955 275 aa11.83□□□□□ -0.52
AC004540.1-203ENST00000421862 CENPWQ5EE01 88 aa11.83□□□□□ -0.52
AC004540.1-203ENST00000421862 RASL11AQ6T310 242 aa11.83□□□□□ -0.52
AC004540.1-203ENST00000421862 SMIM12Q96EX1 92 aa11.83□□□□□ -0.52
AC004540.1-203ENST00000421862 NKX2-5P52952 324 aaPredicted RBP11.82□□□□□ -0.52
AC004540.1-203ENST00000421862 A0A087WYN8 130 aa11.81□□□□□ -0.52
AC004540.1-203ENST00000421862 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
AC004540.1-203ENST00000421862 CHTF8P0CG12 524 aa11.81□□□□□ -0.52
AC004540.1-203ENST00000421862 OR2D3Q8NGH3 330 aa11.81□□□□□ -0.52
AC004540.1-203ENST00000421862 TPPP3Q9BW30 176 aa11.81□□□□□ -0.52
AC004540.1-203ENST00000421862 TRAV1-1A0A0B4J248 108 aa11.8□□□□□ -0.52
AC004540.1-203ENST00000421862 KANTRA0A1W2PQU2 76 aa11.8□□□□□ -0.52
AC004540.1-203ENST00000421862 C15orf56Q8N910 161 aa11.8□□□□□ -0.52
AC004540.1-203ENST00000421862 AP5S1Q9NUS5 200 aa11.8□□□□□ -0.52
AC004540.1-203ENST00000421862 PLAC8Q9NZF1 115 aa11.8□□□□□ -0.52
AC004540.1-203ENST00000421862 F2Z2F3 143 aa11.79□□□□□ -0.52
AC004540.1-203ENST00000421862 TRGC1P0CF51 173 aa11.79□□□□□ -0.52
AC004540.1-203ENST00000421862 CCL20P78556 96 aa11.79□□□□□ -0.52
AC004540.1-203ENST00000421862 DPH3P1Q9H4G8 78 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms