RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 IFNA1P01562 189 aa14.08□□□□□ -0.16
PTPN4-202ENST00000420482 HAMPP81172 84 aa14.08□□□□□ -0.16
PTPN4-202ENST00000420482 CHCHD5Q9BSY4 110 aa14.08□□□□□ -0.16
PTPN4-202ENST00000420482 C1orf43Q9BWL3 253 aa14.08□□□□□ -0.16
PTPN4-202ENST00000420482 MYCBP2O75592 4640 aa14.08□□□□□ -0.16
PTPN4-202ENST00000420482 FLG2Q5D862 2391 aaPredicted RBP14.08□□□□□ -0.16
PTPN4-202ENST00000420482 MUC21A0A0G2JKD1 596 aa14.07□□□□□ -0.16
PTPN4-202ENST00000420482 MUC21A0A140T8X8 626 aa14.07□□□□□ -0.16
PTPN4-202ENST00000420482 PDE6DO43924 150 aa14.07□□□□□ -0.16
PTPN4-202ENST00000420482 SSTP61278 116 aa14.07□□□□□ -0.16
PTPN4-202ENST00000420482 C14orf177Q52M58 125 aa14.07□□□□□ -0.16
PTPN4-202ENST00000420482 CENPWQ5EE01 88 aa14.07□□□□□ -0.16
PTPN4-202ENST00000420482 BIN3Q9NQY0 253 aa14.07□□□□□ -0.16
PTPN4-202ENST00000420482 SRRM2Q9UQ35 2752 aaKnown RBP14.06□□□□□ -0.16
PTPN4-202ENST00000420482 H7C1H1 209 aa14.06□□□□□ -0.16
PTPN4-202ENST00000420482 GNG4P50150 75 aa14.06□□□□□ -0.16
PTPN4-202ENST00000420482 CCL20P78556 96 aa14.06□□□□□ -0.16
PTPN4-202ENST00000420482 ATRAIDQ6UW56 229 aa14.06□□□□□ -0.16
PTPN4-202ENST00000420482 DERL1Q9BUN8 251 aa14.06□□□□□ -0.16
PTPN4-202ENST00000420482 TPPP3Q9BW30 176 aa14.06□□□□□ -0.16
PTPN4-202ENST00000420482 FAM30AQ9NZY2 134 aa14.06□□□□□ -0.16
PTPN4-202ENST00000420482 ANGP03950 147 aaKnown RBP14.05□□□□□ -0.16
PTPN4-202ENST00000420482 MEF2BQ02080 365 aaPredicted RBP14.05□□□□□ -0.16
PTPN4-202ENST00000420482 C15orf54Q8N8G6 183 aa14.05□□□□□ -0.16
PTPN4-202ENST00000420482 FER1L6-AS1Q8NA97 138 aa14.05□□□□□ -0.16
PTPN4-202ENST00000420482 PLA2G1BP04054 148 aaKnown RBP14.04□□□□□ -0.16
PTPN4-202ENST00000420482 SULT1A2P50226 295 aa14.04□□□□□ -0.16
PTPN4-202ENST00000420482 CACNG7P62955 275 aa14.04□□□□□ -0.16
PTPN4-202ENST00000420482 OR2D3Q8NGH3 330 aa14.04□□□□□ -0.16
PTPN4-202ENST00000420482 VAX2Q9UIW0 290 aa14.04□□□□□ -0.16
PTPN4-202ENST00000420482 P01737 135 aa14.03□□□□□ -0.16
PTPN4-202ENST00000420482 Q6ZSA8 131 aa14.03□□□□□ -0.16
PTPN4-202ENST00000420482 DNAJC30Q96LL9 226 aa14.03□□□□□ -0.16
PTPN4-202ENST00000420482 TRBV25-1A0A075B6N4 114 aa14.02□□□□□ -0.17
PTPN4-202ENST00000420482 F2Z2F3 143 aa14.02□□□□□ -0.17
PTPN4-202ENST00000420482 MGPP08493 103 aa14.02□□□□□ -0.17
PTPN4-202ENST00000420482 TAGLN2P37802 199 aaKnown RBP14.02□□□□□ -0.17
PTPN4-202ENST00000420482 MIAQ16674 131 aa14.02□□□□□ -0.17
PTPN4-202ENST00000420482 MPV17L2Q567V2 206 aa14.02□□□□□ -0.17
PTPN4-202ENST00000420482 MED9Q9NWA0 146 aa14.02□□□□□ -0.17
PTPN4-202ENST00000420482 KIF25-AS1Q9Y6Z4 181 aa14.02□□□□□ -0.17
PTPN4-202ENST00000420482 TCTE3Q8IZS6 198 aa14.01□□□□□ -0.17
PTPN4-202ENST00000420482 TRGC1P0CF51 173 aa14□□□□□ -0.17
PTPN4-202ENST00000420482 IGLC6P0CF74 106 aa14□□□□□ -0.17
PTPN4-202ENST00000420482 ENHOQ6UWT2 76 aa14□□□□□ -0.17
PTPN4-202ENST00000420482 SLC51BQ86UW2 128 aa14□□□□□ -0.17
PTPN4-202ENST00000420482 RAB19A4D1S5 217 aa13.99□□□□□ -0.17
PTPN4-202ENST00000420482 C19orf71A6NCJ1 209 aa13.99□□□□□ -0.17
PTPN4-202ENST00000420482 IGLV2-8P01709 118 aa13.99□□□□□ -0.17
PTPN4-202ENST00000420482 GZMBP10144 247 aa13.99□□□□□ -0.17
PTPN4-202ENST00000420482 BCL2P10415 239 aa13.99□□□□□ -0.17
PTPN4-202ENST00000420482 IGHV1-24A0A0C4DH33 117 aa13.98□□□□□ -0.17
PTPN4-202ENST00000420482 HLA-DQA1P01909 254 aa13.97□□□□□ -0.17
PTPN4-202ENST00000420482 LINC00528Q8N1L1 170 aa13.97□□□□□ -0.17
PTPN4-202ENST00000420482 M0QY20 66 aa13.96□□□□□ -0.17
PTPN4-202ENST00000420482 IQCJQ1A5X6 159 aa13.96□□□□□ -0.17
PTPN4-202ENST00000420482 LINC01620Q4KN68 170 aa13.96□□□□□ -0.17
PTPN4-202ENST00000420482 NTM-AS1Q6ZSK4 140 aa13.96□□□□□ -0.17
PTPN4-202ENST00000420482 RBX1P62877 108 aa13.95□□□□□ -0.18
PTPN4-202ENST00000420482 GAGE6Q13070 117 aa13.95□□□□□ -0.18
PTPN4-202ENST00000420482 SUMO4Q6EEV6 95 aa13.95□□□□□ -0.18
PTPN4-202ENST00000420482 RASL11AQ6T310 242 aa13.95□□□□□ -0.18
PTPN4-202ENST00000420482 DPH3P1Q9H4G8 78 aa13.95□□□□□ -0.18
PTPN4-202ENST00000420482 WDR73Q6P4I2 378 aa13.94□□□□□ -0.18
PTPN4-202ENST00000420482 LYZL1Q6UWQ5 148 aa13.94□□□□□ -0.18
PTPN4-202ENST00000420482 SCXQ7RTU7 201 aa13.94□□□□□ -0.18
PTPN4-202ENST00000420482 LINC00269Q8N2A0 174 aa13.94□□□□□ -0.18
PTPN4-202ENST00000420482 CHAC1Q9BUX1 264 aa13.94□□□□□ -0.18
PTPN4-202ENST00000420482 PRR34Q9NV39 138 aa13.94□□□□□ -0.18
PTPN4-202ENST00000420482 DNAH8Q96JB1 4490 aa13.94□□□□□ -0.18
PTPN4-202ENST00000420482 NTF3P20783 257 aa13.93□□□□□ -0.18
PTPN4-202ENST00000420482 C9orf62Q8N4C0 152 aa13.93□□□□□ -0.18
PTPN4-202ENST00000420482 TRBV20OR9-2A0A075B6H5 130 aa13.92□□□□□ -0.18
PTPN4-202ENST00000420482 USP17L23D6RBM5 183 aa13.92□□□□□ -0.18
PTPN4-202ENST00000420482 NKX2-5P52952 324 aaPredicted RBP13.92□□□□□ -0.18
PTPN4-202ENST00000420482 TMEM243Q9BU79 118 aa13.92□□□□□ -0.18
PTPN4-202ENST00000420482 NIT2Q9NQR4 276 aa13.92□□□□□ -0.18
PTPN4-202ENST00000420482 DGAT2L7PQ6IED9 249 aa13.91□□□□□ -0.18
PTPN4-202ENST00000420482 CLPSL2Q6UWE3 100 aa13.91□□□□□ -0.18
PTPN4-202ENST00000420482 NUDT10Q8NFP7 164 aa13.91□□□□□ -0.18
PTPN4-202ENST00000420482 DEFB104AQ8WTQ1 72 aa13.91□□□□□ -0.18
PTPN4-202ENST00000420482 NUDT11Q96G61 164 aa13.91□□□□□ -0.18
PTPN4-202ENST00000420482 PGLYRP4Q96LB8 373 aa13.91□□□□□ -0.18
PTPN4-202ENST00000420482 J3QL48 77 aa13.9□□□□□ -0.18
PTPN4-202ENST00000420482 UBE2L6O14933 153 aa13.9□□□□□ -0.18
PTPN4-202ENST00000420482 CTRLP40313 264 aa13.9□□□□□ -0.18
PTPN4-202ENST00000420482 REG3AQ06141 175 aa13.9□□□□□ -0.18
PTPN4-202ENST00000420482 TWIST1Q15672 202 aa13.9□□□□□ -0.18
PTPN4-202ENST00000420482 SMIM15Q7Z3B0 74 aa13.9□□□□□ -0.18
PTPN4-202ENST00000420482 RPP21Q9H633 154 aaKnown RBP13.9□□□□□ -0.18
PTPN4-202ENST00000420482 TRAV8-4A0A0B4J246 113 aa13.89□□□□□ -0.19
PTPN4-202ENST00000420482 A0A1B0GUV1 79 aa13.88□□□□□ -0.19
PTPN4-202ENST00000420482 BLOC1S1P78537 153 aa13.88□□□□□ -0.19
PTPN4-202ENST00000420482 COTL1Q14019 142 aa13.88□□□□□ -0.19
PTPN4-202ENST00000420482 CLRN3Q8NCR9 226 aa13.88□□□□□ -0.19
PTPN4-202ENST00000420482 CIRBP-AS1Q8TBR5 109 aa13.88□□□□□ -0.19
PTPN4-202ENST00000420482 AKAP14Q86UN6 197 aa13.87□□□□□ -0.19
PTPN4-202ENST00000420482 CNFNQ9BYD5 112 aa13.87□□□□□ -0.19
PTPN4-202ENST00000420482 TMEM250H0YL14 139 aa13.85□□□□□ -0.19
PTPN4-202ENST00000420482 PRSS1P07477 247 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms