RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CACNG7P62955 275 aa13.74□□□□□ -0.21
PKNOX1-202ENST00000418336 WDR73Q6P4I2 378 aa13.74□□□□□ -0.21
PKNOX1-202ENST00000418336 GTSF1Q8WW33 167 aa13.74□□□□□ -0.21
PKNOX1-202ENST00000418336 RPP21Q9H633 154 aaKnown RBP13.74□□□□□ -0.21
PKNOX1-202ENST00000418336 SRP19P09132 144 aaKnown RBP13.73□□□□□ -0.21
PKNOX1-202ENST00000418336 NTM-AS1Q6ZSK4 140 aa13.73□□□□□ -0.21
PKNOX1-202ENST00000418336 FAM231DQ6ZW35 169 aa13.73□□□□□ -0.21
PKNOX1-202ENST00000418336 DNAJC30Q96LL9 226 aa13.73□□□□□ -0.21
PKNOX1-202ENST00000418336 NTF3P20783 257 aa13.72□□□□□ -0.21
PKNOX1-202ENST00000418336 SUMO4Q6EEV6 95 aa13.72□□□□□ -0.21
PKNOX1-202ENST00000418336 KRTAP4-5Q9BYR2 181 aa13.72□□□□□ -0.21
PKNOX1-202ENST00000418336 Q9HAA7 133 aa13.72□□□□□ -0.21
PKNOX1-202ENST00000418336 TRBV6-8A0A0A6YYG3 113 aa13.71□□□□□ -0.21
PKNOX1-202ENST00000418336 XKRY2A2RUG3 117 aa13.71□□□□□ -0.21
PKNOX1-202ENST00000418336 WFDC2Q14508 124 aa13.71□□□□□ -0.21
PKNOX1-202ENST00000418336 MAPKAPK5-AS1Q8N8E1 139 aa13.71□□□□□ -0.21
PKNOX1-202ENST00000418336 PGPEP1Q9NXJ5 209 aa13.71□□□□□ -0.21
PKNOX1-202ENST00000418336 C9JQL5 133 aa13.7□□□□□ -0.22
PKNOX1-202ENST00000418336 TEX261Q6UWH6 196 aa13.7□□□□□ -0.22
PKNOX1-202ENST00000418336 F5H697 171 aa13.69□□□□□ -0.22
PKNOX1-202ENST00000418336 CDPF1Q6NVV7 123 aa13.69□□□□□ -0.22
PKNOX1-202ENST00000418336 LINC01551Q86U37 167 aa13.69□□□□□ -0.22
PKNOX1-202ENST00000418336 EIF5A2Q9GZV4 153 aaKnown RBP13.69□□□□□ -0.22
PKNOX1-202ENST00000418336 FAT1Q14517 4588 aa13.69□□□□□ -0.22
PKNOX1-202ENST00000418336 SMIM17P0DL12 118 aa13.68□□□□□ -0.22
PKNOX1-202ENST00000418336 FOXA3P55318 350 aaPredicted RBP13.68□□□□□ -0.22
PKNOX1-202ENST00000418336 CHCHD7Q9BUK0 85 aa13.68□□□□□ -0.22
PKNOX1-202ENST00000418336 MGPP08493 103 aa13.67□□□□□ -0.22
PKNOX1-202ENST00000418336 SRSF3P84103 164 aaKnown RBP13.67□□□□□ -0.22
PKNOX1-202ENST00000418336 DPH3P1Q9H4G8 78 aa13.67□□□□□ -0.22
PKNOX1-202ENST00000418336 CEBPGP53567 150 aa13.66□□□□□ -0.22
PKNOX1-202ENST00000418336 KRTAP10-1P60331 282 aa13.66□□□□□ -0.22
PKNOX1-202ENST00000418336 CT83Q5H943 113 aa13.66□□□□□ -0.22
PKNOX1-202ENST00000418336 ATRAIDQ6UW56 229 aa13.66□□□□□ -0.22
PKNOX1-202ENST00000418336 SMIM7Q9BQ49 75 aa13.66□□□□□ -0.22
PKNOX1-202ENST00000418336 TRAV8-3A0A0A6YYJ7 113 aa13.65□□□□□ -0.22
PKNOX1-202ENST00000418336 GATCO43716 136 aaKnown RBP13.65□□□□□ -0.22
PKNOX1-202ENST00000418336 TRGC1P0CF51 173 aa13.65□□□□□ -0.22
PKNOX1-202ENST00000418336 Q8N814 137 aa13.65□□□□□ -0.22
PKNOX1-202ENST00000418336 EREGO14944 169 aa13.64□□□□□ -0.23
PKNOX1-202ENST00000418336 MPV17L2Q567V2 206 aa13.64□□□□□ -0.23
PKNOX1-202ENST00000418336 KLK12Q9UKR0 248 aa13.64□□□□□ -0.23
PKNOX1-202ENST00000418336 ZNF727A8MUV8 499 aa13.63□□□□□ -0.23
PKNOX1-202ENST00000418336 PSCAO43653 123 aa13.63□□□□□ -0.23
PKNOX1-202ENST00000418336 TWIST1Q15672 202 aa13.63□□□□□ -0.23
PKNOX1-202ENST00000418336 IQCJQ1A5X6 159 aa13.63□□□□□ -0.23
PKNOX1-202ENST00000418336 RASL11AQ6T310 242 aa13.63□□□□□ -0.23
PKNOX1-202ENST00000418336 ENHOQ6UWT2 76 aa13.63□□□□□ -0.23
PKNOX1-202ENST00000418336 GATD1Q8NB37 220 aa13.63□□□□□ -0.23
PKNOX1-202ENST00000418336 XGP55808 180 aa13.62□□□□□ -0.23
PKNOX1-202ENST00000418336 OSTCQ9NRP0 149 aa13.62□□□□□ -0.23
PKNOX1-202ENST00000418336 VPS13BQ7Z7G8 4022 aa13.61□□□□□ -0.23
PKNOX1-202ENST00000418336 TRAV26-2A0A0B4J265 109 aa13.61□□□□□ -0.23
PKNOX1-202ENST00000418336 TM2D2Q9BX73 214 aa13.61□□□□□ -0.23
PKNOX1-202ENST00000418336 NIT2Q9NQR4 276 aa13.61□□□□□ -0.23
PKNOX1-202ENST00000418336 V9GYV3 84 aa13.61□□□□□ -0.23
PKNOX1-202ENST00000418336 A0A087WX48 190 aa13.6□□□□□ -0.23
PKNOX1-202ENST00000418336 A8MWL6 223 aa13.6□□□□□ -0.23
PKNOX1-202ENST00000418336 H7C1H1 209 aa13.6□□□□□ -0.23
PKNOX1-202ENST00000418336 TMEM97Q5BJF2 176 aa13.6□□□□□ -0.23
PKNOX1-202ENST00000418336 Q8N976 141 aa13.6□□□□□ -0.23
PKNOX1-202ENST00000418336 TSKUQ8WUA8 353 aa13.6□□□□□ -0.23
PKNOX1-202ENST00000418336 ISOC2Q96AB3 205 aa13.6□□□□□ -0.23
PKNOX1-202ENST00000418336 PGLYRP4Q96LB8 373 aa13.6□□□□□ -0.23
PKNOX1-202ENST00000418336 URGCP-MRPS24S4R325 110 aa13.6□□□□□ -0.23
PKNOX1-202ENST00000418336 RPL23P62829 140 aaKnown RBP13.59□□□□□ -0.23
PKNOX1-202ENST00000418336 NTN5Q8WTR8 489 aaPredicted RBP13.59□□□□□ -0.23
PKNOX1-202ENST00000418336 UBE2WQ96B02 151 aa13.59□□□□□ -0.23
PKNOX1-202ENST00000418336 GFRA4Q9GZZ7 299 aa13.59□□□□□ -0.23
PKNOX1-202ENST00000418336 CHCHD5Q9BSY4 110 aa13.58□□□□□ -0.24
PKNOX1-202ENST00000418336 PRR34Q9NV39 138 aa13.58□□□□□ -0.24
PKNOX1-202ENST00000418336 FAM231BA6NCW3 169 aa13.57□□□□□ -0.24
PKNOX1-202ENST00000418336 GAS8-AS1O95177 125 aa13.57□□□□□ -0.24
PKNOX1-202ENST00000418336 RBX1P62877 108 aa13.57□□□□□ -0.24
PKNOX1-202ENST00000418336 FAM74A3Q4VXF1 159 aa13.57□□□□□ -0.24
PKNOX1-202ENST00000418336 KRTAP26-1Q6PEX3 210 aa13.57□□□□□ -0.24
PKNOX1-202ENST00000418336 FRZBQ92765 325 aa13.57□□□□□ -0.24
PKNOX1-202ENST00000418336 TRBV25-1A0A075B6N4 114 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 IGHV1-24A0A0C4DH33 117 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 HIGD1CA8MV81 97 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 TMEM262E9PQX1 116 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 LECT2O14960 151 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 GCSHP23434 173 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 ELOBQ15370 118 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 TMEM241Q24JQ0 296 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 Q8N1X5 172 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 C15orf54Q8N8G6 183 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 BAALCQ8WXS3 180 aa13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 RPL39LQ96EH5 51 aaKnown RBP13.56□□□□□ -0.24
PKNOX1-202ENST00000418336 GAGE6Q13070 117 aa13.55□□□□□ -0.24
PKNOX1-202ENST00000418336 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.55□□□□□ -0.24
PKNOX1-202ENST00000418336 DEFB104AQ8WTQ1 72 aa13.55□□□□□ -0.24
PKNOX1-202ENST00000418336 RNF185Q96GF1 192 aa13.55□□□□□ -0.24
PKNOX1-202ENST00000418336 SMDT1Q9H4I9 107 aa13.55□□□□□ -0.24
PKNOX1-202ENST00000418336 COX11Q9Y6N1 276 aa13.55□□□□□ -0.24
PKNOX1-202ENST00000418336 IGKV2D-24A0A075B6R9 120 aa13.54□□□□□ -0.24
PKNOX1-202ENST00000418336 IGLV5-52A0A0A0MRZ9 124 aa13.54□□□□□ -0.24
PKNOX1-202ENST00000418336 ANGP03950 147 aaKnown RBP13.53□□□□□ -0.24
PKNOX1-202ENST00000418336 PKIAP61925 76 aa13.53□□□□□ -0.24
PKNOX1-202ENST00000418336 Q0VG73 95 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms