RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	TOMM5	Q8N4H5	51 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	C15orf40	Q8WUR7	153 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	PTH2	Q96A98	100 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	KCNS1	Q96KK3	526 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	ATP5S	Q99766	215 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	MARVELD1	Q9BSK0	173 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	UQCC1	Q9NVA1	299 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	PSORS1C2	Q9UIG4	136 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	FLVCR2	Q9UPI3	526 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	IGKV3D-20	A0A0C4DH25	116 aa		5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	IGSF23	A1L1A6	192 aa		5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	NAP1L6	A6NFF2	107 aa		5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	KRBOX1	C9JBD0	128 aa		5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	NDUFS6	O75380	124 aa	Known RBP	5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	TSPAN13	O95857	204 aa		5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	KRTAP10-6	P60371	365 aa	Predicted RBP	5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	MRPS10	P82664	201 aa	Known RBP	5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	IAH1	Q2TAA2	248 aa	Predicted RBP	5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	KCNIP4	Q6PIL6	250 aa		5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	TEX261	Q6UWH6	196 aa		5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	CHCHD5	Q9BSY4	110 aa		5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651	SH3BGRL3	Q9H299	93 aa		5.17	□□□□□ -1.58
NIF3L1-206	ENST00000416651		A8MWV9	139 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651		L7N2F9	121 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	GCG	P01275	180 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	KRTAP1-4	P0C5Y4	121 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	FAU	P35544	74 aa	Known RBP	5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	TAS2R30	P59541	319 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	ZNF664	Q8N3J9	261 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	C9orf62	Q8N4C0	152 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	RAB24	Q969Q5	203 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	LINC00526	Q96FQ7	95 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	KRTAP4-1	Q9BYQ7	146 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	NMES1	Q9C002	83 aa		5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	LSM5	Q9Y4Y9	91 aa	Known RBP	5.16	□□□□□ -1.58
NIF3L1-206	ENST00000416651	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651		A0A1W2PNN7	141 aa		5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651	PLA2G10	O15496	165 aa		5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651	OR7C2	O60412	319 aa		5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651	KRTAP11-1	Q8IUC1	163 aa		5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651		Q8N9P0	234 aa	Predicted RBP	5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651	C20orf203	Q8NBC4	194 aa		5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651	NEXN-AS1	Q8NBZ9	246 aa		5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651	THAP6	Q8TBB0	222 aa		5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651	TMED6	Q8WW62	240 aa		5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651	NPCDR1	Q9BY65	106 aa		5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651	MBD2	Q9UBB5	411 aa		5.15	□□□□□ -1.59
NIF3L1-206	ENST00000416651	IGLV4-60	A0A075B6I1	120 aa		5.14	□□□□□ -1.59
NIF3L1-206	ENST00000416651	TRAV6	A0A075B6T7	132 aa		5.14	□□□□□ -1.59
NIF3L1-206	ENST00000416651	GAGE10	A6NGK3	116 aa		5.14	□□□□□ -1.59
NIF3L1-206	ENST00000416651	FAM25E	A8MYX2	175 aa		5.14	□□□□□ -1.59
NIF3L1-206	ENST00000416651		H3BVH4	76 aa		5.14	□□□□□ -1.59
NIF3L1-206	ENST00000416651	RPS10	P46783	165 aa	Known RBP	5.14	□□□□□ -1.59
NIF3L1-206	ENST00000416651	UBE2L3	P68036	154 aa	Known RBP	5.14	□□□□□ -1.59
NIF3L1-206	ENST00000416651	REG3A	Q06141	175 aa		5.14	□□□□□ -1.59
NIF3L1-206	ENST00000416651	NUDT15	Q9NV35	164 aa		5.14	□□□□□ -1.59
NIF3L1-206	ENST00000416651	TRBV7-3	A0A075B6L6	115 aa		5.13	□□□□□ -1.59
NIF3L1-206	ENST00000416651	GRIFIN	A4D1Z8	144 aa		5.13	□□□□□ -1.59
NIF3L1-206	ENST00000416651	SMLR1	H3BR10	107 aa		5.13	□□□□□ -1.59
NIF3L1-206	ENST00000416651	GIP	P09681	153 aa	Predicted RBP	5.13	□□□□□ -1.59
NIF3L1-206	ENST00000416651		Q5BKY6	102 aa		5.13	□□□□□ -1.59
NIF3L1-206	ENST00000416651	MED9	Q9NWA0	146 aa		5.13	□□□□□ -1.59
NIF3L1-206	ENST00000416651	PIGBOS1	A0A0B4J2F0	54 aa		5.12	□□□□□ -1.59
NIF3L1-206	ENST00000416651	RPL36A	P83881	106 aa	Known RBP	5.12	□□□□□ -1.59
NIF3L1-206	ENST00000416651	FLI1	Q01543	452 aa	Predicted RBP	5.12	□□□□□ -1.59
NIF3L1-206	ENST00000416651	C1orf137	Q5JT78	98 aa		5.12	□□□□□ -1.59
NIF3L1-206	ENST00000416651	TMEM252	Q8N6L7	170 aa		5.12	□□□□□ -1.59
NIF3L1-206	ENST00000416651	RPL36AL	Q969Q0	106 aa	Known RBP	5.12	□□□□□ -1.59
NIF3L1-206	ENST00000416651	RETNLB	Q9BQ08	111 aa		5.12	□□□□□ -1.59
NIF3L1-206	ENST00000416651	OTOR	Q9NRC9	128 aa		5.12	□□□□□ -1.59
NIF3L1-206	ENST00000416651	ARMS2	P0C7Q2	107 aa		5.11	□□□□□ -1.59
NIF3L1-206	ENST00000416651	S100A4	P26447	101 aa	Known RBP	5.11	□□□□□ -1.59
NIF3L1-206	ENST00000416651	S100A10	P60903	97 aa		5.11	□□□□□ -1.59
NIF3L1-206	ENST00000416651	PHF5A	Q7RTV0	110 aa	Known RBP	5.11	□□□□□ -1.59
NIF3L1-206	ENST00000416651	OR10G8	Q8NGN5	311 aa		5.11	□□□□□ -1.59
NIF3L1-206	ENST00000416651	SFRP2	Q96HF1	295 aa		5.11	□□□□□ -1.59
NIF3L1-206	ENST00000416651	PSG8	Q9UQ74	426 aa		5.11	□□□□□ -1.59
NIF3L1-206	ENST00000416651	TRAV34	A0A0B4J273	112 aa		5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	KANTR	A0A1W2PQU2	76 aa		5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	TEX46	H3BTG2	121 aa		5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651		M0R381	172 aa		5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	HMGB3	O15347	200 aa	Known RBP	5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	S100A9	P06702	114 aa	Known RBP	5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	S100A11	P31949	105 aa		5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	SULT1A1	P50225	295 aa		5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	S100A12	P80511	92 aa		5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	PRR27	Q6MZM9	219 aa		5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	CMTM2	Q8TAZ6	248 aa		5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	SLC25A21	Q9BQT8	299 aa	Predicted RBP	5.1	□□□□□ -1.59
NIF3L1-206	ENST00000416651	FXYD6-FXYD2	A0A087WZ82	144 aa		5.09	□□□□□ -1.59
NIF3L1-206	ENST00000416651	IGKV3OR2-268	A0A0C4DH90	116 aa		5.09	□□□□□ -1.59
NIF3L1-206	ENST00000416651		M0R036	132 aa		5.09	□□□□□ -1.59
NIF3L1-206	ENST00000416651	RHOD	O00212	210 aa		5.09	□□□□□ -1.59
NIF3L1-206	ENST00000416651	SCO1	O75880	301 aa		5.09	□□□□□ -1.59
NIF3L1-206	ENST00000416651	MT-ND6	P03923	174 aa		5.09	□□□□□ -1.59
NIF3L1-206	ENST00000416651	CRIP1	P50238	77 aa		5.09	□□□□□ -1.59
NIF3L1-206	ENST00000416651	PIK3CD-AS1	Q5SR53	167 aa		5.09	□□□□□ -1.59
NIF3L1-206	ENST00000416651	CST9LP1	Q5W188	147 aa		5.09	□□□□□ -1.59
NIF3L1-206	ENST00000416651	PRNT	Q86SH4	94 aa		5.09	□□□□□ -1.59
NIF3L1-206	ENST00000416651	LYRM2	Q9NU23	88 aa	Predicted RBP	5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms