RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 C15orf56Q8N910 161 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 C20orf203Q8NBC4 194 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 INO80EQ8NBZ0 244 aaPredicted RBP1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 NEXN-AS1Q8NBZ9 246 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 SCGB1C1Q8TD33 95 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 DIRC1Q969H9 104 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 AQP10Q96PS8 301 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 GFRA4Q9GZZ7 299 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 RBM38Q9H0Z9 239 aaKnown RBP1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 EPDR1Q9UM22 224 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 V9GYH0 126 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 IGLV4-60A0A075B6I1 120 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 TMSB15BA0A087X1C1 80 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 TRAV34A0A0B4J273 112 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 IGKV3OR2-268A0A0C4DH90 116 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 UBE2L6O14933 153 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 HMGB3O15347 200 aaKnown RBP1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 IGLV7-43P04211 117 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 ARL14EPLP0DKL9 152 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 SMIM17P0DL12 118 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 CDC34P49427 236 aaPredicted RBP1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 CRIP1P50238 77 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 PTTG1IPP53801 180 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 LINC01547P58512 204 aaPredicted RBP1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 EIF5AP63241 154 aaKnown RBP1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 SYCNQ0VAF6 134 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 ZNF674Q2M3X9 581 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 LINC01559Q495D7 138 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 C1orf137Q5JT78 98 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 FAM162BQ5T6X4 162 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 SPANXN1Q5VSR9 72 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 SUN5Q8TC36 379 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 CHCHD10Q8WYQ3 142 aaPredicted RBP1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 CARD19Q96LW7 228 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 SEC22CQ9BRL7 303 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 TMEM243Q9BU79 118 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 ZNF471Q9BX82 626 aaPredicted RBP1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 TMEM167BQ9NRX6 74 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 ZFP30Q9Y2G7 519 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 ARL2-SNX15V9GYD0 113 aa1.43□□□□□ -2.18
RNU4-53P-201ENST00000410828 A0A087WZ39 114 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 IGHV1-58A0A0C4DH39 117 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 LOC107984640A0A0U1RRK4 108 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 A0A1W2PNN7 141 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 A0A1W2PRE2 83 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 H0Y9J4 135 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 ZNF561-AS1K7EIQ3 104 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 PEX7O00628 323 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 SH2D1AO60880 128 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 TSPAN13O95857 204 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 CXorf1O96002 111 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 KRTAP1-4P0C5Y4 121 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 STAG3L2P0CL84 134 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 STAG3L3P0CL85 134 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 FGF6P10767 208 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 GCHFRP30047 84 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 RPL12P30050 165 aaKnown RBP1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 BTCP35070 178 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 AMTP48728 403 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 UBE2G1P62253 170 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 CYCSP99999 105 aaKnown RBP1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 GAGE2BQ13066 116 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 LRRC37A5PQ49AS3 106 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 C9orf116Q5BN46 136 aaPredicted RBP1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 COX8CQ7Z4L0 72 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 Q86TA4 180 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 OR10AG1Q8NH19 301 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 TSKUQ8WUA8 353 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 RAB24Q969Q5 203 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 HIST1H2BAQ96A08 127 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 ISOC2Q96AB3 205 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 PGLYRP4Q96LB8 373 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 AP1S3Q96PC3 154 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 SDHCQ99643 169 aaPredicted RBP1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 MLST8Q9BVC4 326 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 SSBP4Q9BWG4 385 aaPredicted RBP1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 SMIM3Q9BZL3 60 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 NKX6-2Q9C056 277 aaPredicted RBP1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 MED28Q9H204 178 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 CDIP1Q9H305 208 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 NUDT15Q9NV35 164 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 CARHSP1Q9Y2V2 147 aaKnown RBP1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 HSPB11Q9Y547 144 aa1.42□□□□□ -2.18
RNU4-53P-201ENST00000410828 MUC21A0A140T8X8 626 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 H0YIZ8 118 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 M0QY20 66 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 PLA2G10O15496 165 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 LYRM1O43325 122 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 SNAI2O43623 268 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 APOMO95445 188 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 SIX6O95475 246 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 MBP02144 154 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 MGPP08493 103 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 CXCL1P09341 107 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 H2AFB2P0C5Z0 115 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 OR5AL1P0C617 328 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 PET100P0DJ07 73 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 IL7P13232 177 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 XCL1P47992 114 aa1.41□□□□□ -2.18
RNU4-53P-201ENST00000410828 NKX2-5P52952 324 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms