RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 TMSB15BA0A087X1C1 80 aa10.11□□□□□ -0.79
SNCA-205ENST00000394991 TRAV1-1A0A0B4J248 108 aa10.11□□□□□ -0.79
SNCA-205ENST00000394991 GRIFINA4D1Z8 144 aa10.11□□□□□ -0.79
SNCA-205ENST00000394991 HLA-DQA1P01909 254 aa10.11□□□□□ -0.79
SNCA-205ENST00000394991 A0A1B0GVG6 124 aa10.1□□□□□ -0.79
SNCA-205ENST00000394991 KRBOX1C9JBD0 128 aa10.1□□□□□ -0.79
SNCA-205ENST00000394991 H3BVH4 76 aa10.1□□□□□ -0.79
SNCA-205ENST00000394991 RHODO00212 210 aa10.1□□□□□ -0.79
SNCA-205ENST00000394991 ODF1Q14990 250 aa10.1□□□□□ -0.79
SNCA-205ENST00000394991 COX8CQ7Z4L0 72 aa10.1□□□□□ -0.79
SNCA-205ENST00000394991 BAGE2Q86Y30 109 aa10.1□□□□□ -0.79
SNCA-205ENST00000394991 IL36BQ9NZH7 164 aa10.1□□□□□ -0.79
SNCA-205ENST00000394991 ZNF674Q2M3X9 581 aa10.09□□□□□ -0.79
SNCA-205ENST00000394991 MPV17L2Q567V2 206 aa10.09□□□□□ -0.79
SNCA-205ENST00000394991 FAM74A4Q5TZK3 123 aa10.09□□□□□ -0.79
SNCA-205ENST00000394991 DGAT2L7PQ6IED9 249 aa10.09□□□□□ -0.79
SNCA-205ENST00000394991 KCNIP4Q6PIL6 250 aa10.09□□□□□ -0.79
SNCA-205ENST00000394991 SDIM1Q6ZPB5 146 aa10.09□□□□□ -0.79
SNCA-205ENST00000394991 C15orf54Q8N8G6 183 aa10.09□□□□□ -0.79
SNCA-205ENST00000394991 A0A087WWL8 130 aa10.08□□□□□ -0.8
SNCA-205ENST00000394991 IFNA1P01562 189 aa10.08□□□□□ -0.8
SNCA-205ENST00000394991 CRPP02741 224 aa10.08□□□□□ -0.8
SNCA-205ENST00000394991 ARMS2P0C7Q2 107 aa10.08□□□□□ -0.8
SNCA-205ENST00000394991 UBE2D3P61077 147 aa10.08□□□□□ -0.8
SNCA-205ENST00000394991 UBE2D2P62837 147 aa10.08□□□□□ -0.8
SNCA-205ENST00000394991 CIRBPQ14011 172 aaKnown RBP10.08□□□□□ -0.8
SNCA-205ENST00000394991 TMEM262E9PQX1 116 aa10.07□□□□□ -0.8
SNCA-205ENST00000394991 RPL35P42766 123 aaKnown RBP10.07□□□□□ -0.8
SNCA-205ENST00000394991 LINC01559Q495D7 138 aa10.07□□□□□ -0.8
SNCA-205ENST00000394991 PRR27Q6MZM9 219 aa10.07□□□□□ -0.8
SNCA-205ENST00000394991 KRTAP26-1Q6PEX3 210 aa10.07□□□□□ -0.8
SNCA-205ENST00000394991 ALKAL2Q6UX46 152 aa10.07□□□□□ -0.8
SNCA-205ENST00000394991 NKX2-5P52952 324 aaPredicted RBP10.06□□□□□ -0.8
SNCA-205ENST00000394991 RPL19P84098 196 aaKnown RBP10.06□□□□□ -0.8
SNCA-205ENST00000394991 DNLZQ5SXM8 178 aa10.06□□□□□ -0.8
SNCA-205ENST00000394991 SFRP2Q96HF1 295 aa10.06□□□□□ -0.8
SNCA-205ENST00000394991 DERL1Q9BUN8 251 aa10.06□□□□□ -0.8
SNCA-205ENST00000394991 TRBV6-8A0A0A6YYG3 113 aa10.05□□□□□ -0.8
SNCA-205ENST00000394991 TRBV10-1A0A0K0K1A3 114 aa10.05□□□□□ -0.8
SNCA-205ENST00000394991 ANGP03950 147 aaKnown RBP10.05□□□□□ -0.8
SNCA-205ENST00000394991 RPL36AP83881 106 aaKnown RBP10.05□□□□□ -0.8
SNCA-205ENST00000394991 MEF2BQ02080 365 aaPredicted RBP10.05□□□□□ -0.8
SNCA-205ENST00000394991 RPL36ALQ969Q0 106 aaKnown RBP10.05□□□□□ -0.8
SNCA-205ENST00000394991 C11orf52Q96A22 123 aa10.05□□□□□ -0.8
SNCA-205ENST00000394991 MLST8Q9BVC4 326 aa10.05□□□□□ -0.8
SNCA-205ENST00000394991 MED9Q9NWA0 146 aa10.05□□□□□ -0.8
SNCA-205ENST00000394991 PHLDA3Q9Y5J5 127 aa10.05□□□□□ -0.8
SNCA-205ENST00000394991 TRBV7-3A0A075B6L6 115 aa10.04□□□□□ -0.8
SNCA-205ENST00000394991 M0R381 172 aa10.04□□□□□ -0.8
SNCA-205ENST00000394991 BCL2P10415 239 aa10.04□□□□□ -0.8
SNCA-205ENST00000394991 MIAQ16674 131 aa10.04□□□□□ -0.8
SNCA-205ENST00000394991 RAB19A4D1S5 217 aa10.03□□□□□ -0.8
SNCA-205ENST00000394991 PDE6DO43924 150 aa10.03□□□□□ -0.8
SNCA-205ENST00000394991 CENPWQ5EE01 88 aa10.03□□□□□ -0.8
SNCA-205ENST00000394991 CLPSL2Q6UWE3 100 aa10.03□□□□□ -0.8
SNCA-205ENST00000394991 VAX2Q9UIW0 290 aa10.03□□□□□ -0.8
SNCA-205ENST00000394991 A0A087WYN8 130 aa10.02□□□□□ -0.81
SNCA-205ENST00000394991 CHTF8P0CG12 524 aa10.02□□□□□ -0.81
SNCA-205ENST00000394991 BLOC1S1P78537 153 aa10.02□□□□□ -0.81
SNCA-205ENST00000394991 ZFP82Q8N141 532 aa10.02□□□□□ -0.81
SNCA-205ENST00000394991 OR10G8Q8NGN5 311 aa10.02□□□□□ -0.81
SNCA-205ENST00000394991 PRR34Q9NV39 138 aa10.02□□□□□ -0.81
SNCA-205ENST00000394991 GNG4P50150 75 aa10.01□□□□□ -0.81
SNCA-205ENST00000394991 NEXN-AS1Q8NBZ9 246 aa10.01□□□□□ -0.81
SNCA-205ENST00000394991 LINC01600Q96MT4 127 aa10.01□□□□□ -0.81
SNCA-205ENST00000394991 PHOX2AO14813 284 aa10□□□□□ -0.81
SNCA-205ENST00000394991 TAGLN2P37802 199 aaKnown RBP10□□□□□ -0.81
SNCA-205ENST00000394991 SSTP61278 116 aa10□□□□□ -0.81
SNCA-205ENST00000394991 CNBPP62633 177 aaKnown RBP10□□□□□ -0.81
SNCA-205ENST00000394991 SPACA4Q8TDM5 124 aa10□□□□□ -0.81
SNCA-205ENST00000394991 CHCHD5Q9BSY4 110 aa10□□□□□ -0.81
SNCA-205ENST00000394991 MUC21A0A0G2JKD1 596 aa9.99□□□□□ -0.81
SNCA-205ENST00000394991 MUC21A0A140T8X8 626 aa9.99□□□□□ -0.81
SNCA-205ENST00000394991 CXCL1P09341 107 aa9.99□□□□□ -0.81
SNCA-205ENST00000394991 NTM-AS1Q6ZSK4 140 aa9.99□□□□□ -0.81
SNCA-205ENST00000394991 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
SNCA-205ENST00000394991 RNF185Q96GF1 192 aa9.99□□□□□ -0.81
SNCA-205ENST00000394991 SLPIP03973 132 aa9.98□□□□□ -0.81
SNCA-205ENST00000394991 RBX1P62877 108 aa9.98□□□□□ -0.81
SNCA-205ENST00000394991 SPANXN1Q5VSR9 72 aa9.98□□□□□ -0.81
SNCA-205ENST00000394991 LINC00269Q8N2A0 174 aa9.98□□□□□ -0.81
SNCA-205ENST00000394991 CLRN3Q8NCR9 226 aa9.98□□□□□ -0.81
SNCA-205ENST00000394991 OR2D3Q8NGH3 330 aa9.98□□□□□ -0.81
SNCA-205ENST00000394991 DPH3P1Q9H4G8 78 aa9.98□□□□□ -0.81
SNCA-205ENST00000394991 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
SNCA-205ENST00000394991 IGHV3-64A0A075B6Q5 118 aa9.97□□□□□ -0.81
SNCA-205ENST00000394991 GAS8-AS1O95177 125 aa9.97□□□□□ -0.81
SNCA-205ENST00000394991 GZMBP10144 247 aa9.97□□□□□ -0.81
SNCA-205ENST00000394991 SMIM12Q96EX1 92 aa9.97□□□□□ -0.81
SNCA-205ENST00000394991 TPPP3Q9BW30 176 aa9.97□□□□□ -0.81
SNCA-205ENST00000394991 PLAC8Q9NZF1 115 aa9.97□□□□□ -0.81
SNCA-205ENST00000394991 TRBV20OR9-2A0A075B6H5 130 aa9.96□□□□□ -0.82
SNCA-205ENST00000394991 hDV102S1A0JD36 115 aa9.96□□□□□ -0.82
SNCA-205ENST00000394991 SNAI2O43623 268 aa9.96□□□□□ -0.82
SNCA-205ENST00000394991 P01737 135 aa9.96□□□□□ -0.82
SNCA-205ENST00000394991 PKIAP61925 76 aa9.96□□□□□ -0.82
SNCA-205ENST00000394991 GAGE6Q13070 117 aa9.96□□□□□ -0.82
SNCA-205ENST00000394991 DPH3Q96FX2 82 aa9.96□□□□□ -0.82
SNCA-205ENST00000394991 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.82
SNCA-205ENST00000394991 BIN3Q9NQY0 253 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms