RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 LCE2CQ5TA81 110 aa13.47□□□□□ -0.25
PSEN1-203ENST00000394157 RPL36ALQ969Q0 106 aaKnown RBP13.47□□□□□ -0.25
PSEN1-203ENST00000394157 GNB1LQ9BYB4 327 aa13.47□□□□□ -0.25
PSEN1-203ENST00000394157 A0A096LPF7 62 aa13.46□□□□□ -0.25
PSEN1-203ENST00000394157 PPP1R17O96001 155 aa13.46□□□□□ -0.25
PSEN1-203ENST00000394157 HLA-DQA1P01909 254 aa13.46□□□□□ -0.25
PSEN1-203ENST00000394157 MT-ND6P03923 174 aa13.46□□□□□ -0.25
PSEN1-203ENST00000394157 NIT2Q9NQR4 276 aa13.46□□□□□ -0.25
PSEN1-203ENST00000394157 TRBV7-3A0A075B6L6 115 aa13.45□□□□□ -0.26
PSEN1-203ENST00000394157 PPBPP02775 128 aa13.45□□□□□ -0.26
PSEN1-203ENST00000394157 TMEM136Q6ZRR5 245 aa13.45□□□□□ -0.26
PSEN1-203ENST00000394157 NEGR1Q7Z3B1 354 aa13.45□□□□□ -0.26
PSEN1-203ENST00000394157 CBLN2Q8IUK8 224 aa13.45□□□□□ -0.26
PSEN1-203ENST00000394157 NEXN-AS1Q8NBZ9 246 aa13.45□□□□□ -0.26
PSEN1-203ENST00000394157 YPEL4Q96NS1 127 aa13.45□□□□□ -0.26
PSEN1-203ENST00000394157 DYNC2H1Q8NCM8 4307 aaKnown RBP13.45□□□□□ -0.26
PSEN1-203ENST00000394157 TGIF2-C20orf24A0A0A6YYL0 155 aa13.44□□□□□ -0.26
PSEN1-203ENST00000394157 LOC100131303A0A0U1RQF7 123 aa13.44□□□□□ -0.26
PSEN1-203ENST00000394157 LINC00694P0DN24 101 aa13.44□□□□□ -0.26
PSEN1-203ENST00000394157 MRPL51Q4U2R6 128 aaKnown RBP13.44□□□□□ -0.26
PSEN1-203ENST00000394157 TNFRSF18Q9Y5U5 241 aa13.44□□□□□ -0.26
PSEN1-203ENST00000394157 TRAV26-2A0A0B4J265 109 aa13.43□□□□□ -0.26
PSEN1-203ENST00000394157 GAGE12JA6NER3 117 aa13.43□□□□□ -0.26
PSEN1-203ENST00000394157 P0DMU3 169 aa13.43□□□□□ -0.26
PSEN1-203ENST00000394157 FAM231AP0DMU4 169 aa13.43□□□□□ -0.26
PSEN1-203ENST00000394157 FAM231CP0DMU5 169 aa13.43□□□□□ -0.26
PSEN1-203ENST00000394157 GAGE1Q13065 139 aa13.43□□□□□ -0.26
PSEN1-203ENST00000394157 GAGE4Q13068 117 aa13.43□□□□□ -0.26
PSEN1-203ENST00000394157 GAGE5Q13069 117 aa13.43□□□□□ -0.26
PSEN1-203ENST00000394157 GAGE13Q4V321 117 aa13.43□□□□□ -0.26
PSEN1-203ENST00000394157 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-203ENST00000394157 ZNRF2Q8NHG8 242 aa13.43□□□□□ -0.26
PSEN1-203ENST00000394157 STARD9Q9P2P6 4700 aa13.42□□□□□ -0.26
PSEN1-203ENST00000394157 CKS2P33552 79 aa13.42□□□□□ -0.26
PSEN1-203ENST00000394157 TIRAPP58753 221 aa13.42□□□□□ -0.26
PSEN1-203ENST00000394157 UBE2D3P61077 147 aa13.42□□□□□ -0.26
PSEN1-203ENST00000394157 UBE2D2P62837 147 aa13.42□□□□□ -0.26
PSEN1-203ENST00000394157 TRBV6-5A0A0K0K1A5 114 aa13.41□□□□□ -0.26
PSEN1-203ENST00000394157 OR10J3Q5JRS4 329 aa13.41□□□□□ -0.26
PSEN1-203ENST00000394157 ATP6V0E2Q8NHE4 81 aa13.41□□□□□ -0.26
PSEN1-203ENST00000394157 Q9UF83 564 aa13.41□□□□□ -0.26
PSEN1-203ENST00000394157 TENM2Q9NT68 2774 aa13.4□□□□□ -0.26
PSEN1-203ENST00000394157 PHOX2AO14813 284 aa13.4□□□□□ -0.26
PSEN1-203ENST00000394157 CCL18P55774 89 aa13.4□□□□□ -0.26
PSEN1-203ENST00000394157 DAZ4Q86SG3 579 aaKnown RBP13.4□□□□□ -0.26
PSEN1-203ENST00000394157 ORMDL3Q8N138 153 aa13.4□□□□□ -0.26
PSEN1-203ENST00000394157 DAZ3Q9NR90 486 aaKnown RBP13.4□□□□□ -0.26
PSEN1-203ENST00000394157 LAMTOR2Q9Y2Q5 125 aa13.4□□□□□ -0.26
PSEN1-203ENST00000394157 D6R8Y8 96 aa13.39□□□□□ -0.27
PSEN1-203ENST00000394157 APCSP02743 223 aa13.39□□□□□ -0.27
PSEN1-203ENST00000394157 GTSF1LQ9H1H1 148 aa13.39□□□□□ -0.27
PSEN1-203ENST00000394157 A6NJY4 79 aa13.38□□□□□ -0.27
PSEN1-203ENST00000394157 TMEM97Q5BJF2 176 aa13.38□□□□□ -0.27
PSEN1-203ENST00000394157 NRACQ8N912 160 aa13.38□□□□□ -0.27
PSEN1-203ENST00000394157 RPL39LQ96EH5 51 aaKnown RBP13.38□□□□□ -0.27
PSEN1-203ENST00000394157 C20orf78Q9BR46 151 aa13.38□□□□□ -0.27
PSEN1-203ENST00000394157 ST20Q9HBF5 79 aa13.38□□□□□ -0.27
PSEN1-203ENST00000394157 NCR2O95944 276 aa13.37□□□□□ -0.27
PSEN1-203ENST00000394157 LYPD5Q6UWN5 251 aa13.37□□□□□ -0.27
PSEN1-203ENST00000394157 SMKR1H3BMG3 65 aa13.36□□□□□ -0.27
PSEN1-203ENST00000394157 RPS10P46783 165 aaKnown RBP13.36□□□□□ -0.27
PSEN1-203ENST00000394157 ESRGQ1W209 222 aa13.36□□□□□ -0.27
PSEN1-203ENST00000394157 LGALS9CQ6DKI2 356 aa13.36□□□□□ -0.27
PSEN1-203ENST00000394157 PRELID3AQ96N28 172 aa13.36□□□□□ -0.27
PSEN1-203ENST00000394157 MRPL18Q9H0U6 180 aaKnown RBP13.36□□□□□ -0.27
PSEN1-203ENST00000394157 TRAPPC1Q9Y5R8 145 aa13.36□□□□□ -0.27
PSEN1-203ENST00000394157 SDHAF1A6NFY7 115 aa13.35□□□□□ -0.27
PSEN1-203ENST00000394157 SCO1O75880 301 aa13.35□□□□□ -0.27
PSEN1-203ENST00000394157 GAS8-AS1O95177 125 aa13.35□□□□□ -0.27
PSEN1-203ENST00000394157 TNFRSF6BO95407 300 aa13.35□□□□□ -0.27
PSEN1-203ENST00000394157 SUMO2P61956 95 aaKnown RBP13.35□□□□□ -0.27
PSEN1-203ENST00000394157 RPL32P62910 135 aaKnown RBP13.35□□□□□ -0.27
PSEN1-203ENST00000394157 COLCA2A8K830 154 aa13.34□□□□□ -0.27
PSEN1-203ENST00000394157 POLR2KP53803 58 aaKnown RBP13.34□□□□□ -0.27
PSEN1-203ENST00000394157 FABP9Q0Z7S8 132 aa13.34□□□□□ -0.27
PSEN1-203ENST00000394157 MRPS16Q9Y3D3 137 aaKnown RBP13.34□□□□□ -0.27
PSEN1-203ENST00000394157 PLECQ15149 4684 aaKnown RBP13.34□□□□□ -0.27
PSEN1-203ENST00000394157 TRBV27A0A0K0K1C4 114 aa13.33□□□□□ -0.28
PSEN1-203ENST00000394157 UBE2DNLQ8IWF7 75 aa13.33□□□□□ -0.28
PSEN1-203ENST00000394157 TMEM70Q9BUB7 260 aa13.33□□□□□ -0.28
PSEN1-203ENST00000394157 PRSS47A8MTI9 375 aa13.32□□□□□ -0.28
PSEN1-203ENST00000394157 I3L3M4 83 aa13.32□□□□□ -0.28
PSEN1-203ENST00000394157 VCYO14598 125 aa13.32□□□□□ -0.28
PSEN1-203ENST00000394157 NPYP01303 97 aa13.32□□□□□ -0.28
PSEN1-203ENST00000394157 LELP1Q5T871 98 aa13.32□□□□□ -0.28
PSEN1-203ENST00000394157 UPK3BQ9BT76 320 aa13.32□□□□□ -0.28
PSEN1-203ENST00000394157 LINC00588Q9Y4M8 146 aa13.32□□□□□ -0.28
PSEN1-203ENST00000394157 TCAPO15273 167 aa13.31□□□□□ -0.28
PSEN1-203ENST00000394157 RAB5AP20339 215 aa13.31□□□□□ -0.28
PSEN1-203ENST00000394157 COTL1Q14019 142 aa13.31□□□□□ -0.28
PSEN1-203ENST00000394157 TRAV8-6A0A0B4J262 113 aa13.3□□□□□ -0.28
PSEN1-203ENST00000394157 IGHV3-38A0A0C4DH36 116 aa13.3□□□□□ -0.28
PSEN1-203ENST00000394157 PMCHP20382 165 aa13.3□□□□□ -0.28
PSEN1-203ENST00000394157 KIAA1644Q3SXP7 199 aa13.3□□□□□ -0.28
PSEN1-203ENST00000394157 LINC00476Q8WZB0 136 aa13.3□□□□□ -0.28
PSEN1-203ENST00000394157 ALKBH7Q9BT30 221 aaPredicted RBP13.3□□□□□ -0.28
PSEN1-203ENST00000394157 MAP1LC3AQ9H492 121 aa13.3□□□□□ -0.28
PSEN1-203ENST00000394157 TRBV6-8A0A0A6YYG3 113 aa13.29□□□□□ -0.28
PSEN1-203ENST00000394157 SMIM2Q9BVW6 85 aa13.29□□□□□ -0.28
PSEN1-203ENST00000394157 IQCJQ1A5X6 159 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms