RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 Q8N8P6 123 aa6.3□□□□□ -1.4
RNU1-28P-201ENST00000383861 TMEM18Q96B42 140 aa6.3□□□□□ -1.4
RNU1-28P-201ENST00000383861 ZNF479Q96JC4 524 aa6.3□□□□□ -1.4
RNU1-28P-201ENST00000383861 B9D2Q9BPU9 175 aa6.3□□□□□ -1.4
RNU1-28P-201ENST00000383861 PRADC1Q9BSG0 188 aa6.3□□□□□ -1.4
RNU1-28P-201ENST00000383861 SMIM2Q9BVW6 85 aa6.3□□□□□ -1.4
RNU1-28P-201ENST00000383861 AP5S1Q9NUS5 200 aa6.3□□□□□ -1.4
RNU1-28P-201ENST00000383861 MUC4Q99102 2169 aa6.3□□□□□ -1.4
RNU1-28P-201ENST00000383861 NOTCH3Q9UM47 2321 aa6.3□□□□□ -1.4
RNU1-28P-201ENST00000383861 LINC01546A6NGU7 62 aa6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 LINC01549A6NIU2 74 aa6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 K7EQD1 137 aa6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 NHLRC4P0CG21 123 aaPredicted RBP6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 GATA1P15976 413 aaPredicted RBP6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 RHOHQ15669 191 aa6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 RPL39LQ96EH5 51 aaKnown RBP6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 KIR2DL4Q99706 377 aa6.29□□□□□ -1.4
RNU1-28P-201ENST00000383861 SDHAF1A6NFY7 115 aa6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 DEFB4AO15263 64 aa6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 GAS8-AS1O95177 125 aa6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 POLR2KP53803 58 aaKnown RBP6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 FHL2Q14192 279 aa6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 ORMDL2Q53FV1 153 aa6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 HIST3H2BBQ8N257 126 aa6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 TMEM70Q9BUB7 260 aa6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 RETNQ9HD89 108 aa6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 PRO0255Q9UI72 69 aa6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 HHLA3Q9XRX5 114 aa6.28□□□□□ -1.4
RNU1-28P-201ENST00000383861 VWFP04275 2813 aa6.27□□□□□ -1.41
RNU1-28P-201ENST00000383861 IGLV2-18A0A075B6J9 118 aa6.27□□□□□ -1.41
RNU1-28P-201ENST00000383861 TRBV7-3A0A075B6L6 115 aa6.27□□□□□ -1.41
RNU1-28P-201ENST00000383861 TRBV27A0A0K0K1C4 114 aa6.27□□□□□ -1.41
RNU1-28P-201ENST00000383861 I3L3M4 83 aa6.27□□□□□ -1.41
RNU1-28P-201ENST00000383861 LAGE3Q14657 143 aa6.27□□□□□ -1.41
RNU1-28P-201ENST00000383861 DAZ4Q86SG3 579 aaKnown RBP6.27□□□□□ -1.41
RNU1-28P-201ENST00000383861 SLC25A29Q8N8R3 303 aa6.27□□□□□ -1.41
RNU1-28P-201ENST00000383861 NEXN-AS1Q8NBZ9 246 aa6.27□□□□□ -1.41
RNU1-28P-201ENST00000383861 DAZ3Q9NR90 486 aaKnown RBP6.27□□□□□ -1.41
RNU1-28P-201ENST00000383861 A0A0J9YWU9 116 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 FCER1GP30273 86 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 AMTP48728 403 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 LINC00310P59036 64 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 TMEM97Q5BJF2 176 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 Q6ZSN1 163 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 SH2D6Q7Z4S9 175 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 C11orf45Q8TAV5 145 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 URB1-AS1Q96HZ7 61 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 HSPB8Q9UJY1 196 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 CELA1Q9UNI1 258 aa6.26□□□□□ -1.41
RNU1-28P-201ENST00000383861 F5H768 121 aa6.25□□□□□ -1.41
RNU1-28P-201ENST00000383861 PAX4O43316 350 aa6.25□□□□□ -1.41
RNU1-28P-201ENST00000383861 NUPR1O60356 82 aa6.25□□□□□ -1.41
RNU1-28P-201ENST00000383861 HBDP02042 147 aa6.25□□□□□ -1.41
RNU1-28P-201ENST00000383861 CRYBA4P53673 196 aa6.25□□□□□ -1.41
RNU1-28P-201ENST00000383861 C12orf74Q32Q52 190 aa6.25□□□□□ -1.41
RNU1-28P-201ENST00000383861 PDZD11Q5EBL8 140 aa6.25□□□□□ -1.41
RNU1-28P-201ENST00000383861 ZNRF2Q8NHG8 242 aa6.25□□□□□ -1.41
RNU1-28P-201ENST00000383861 HIST1H2BLQ99880 126 aa6.25□□□□□ -1.41
RNU1-28P-201ENST00000383861 IGHV1-24A0A0C4DH33 117 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 LOC105371267A0A1B0GV96 52 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 H3BNG1 76 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 LEPROTL1O95214 131 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 NUDT3O95989 172 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 P0DMU3 169 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 FAM231AP0DMU4 169 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 FAM231CP0DMU5 169 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 FABP4P15090 132 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 UBE2D3P61077 147 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 UBE2D2P62837 147 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 DEFA6Q01524 100 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 SMAGPQ0VAQ4 97 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 COTL1Q14019 142 aa6.24□□□□□ -1.41
RNU1-28P-201ENST00000383861 GAGE12JA6NER3 117 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 ATP5LO75964 103 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 GYPEP15421 78 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 GAGE1Q13065 139 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 GAGE4Q13068 117 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 GAGE5Q13069 117 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 FAM19A2Q8N3H0 131 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 GTSF1LQ9H1H1 148 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 CYSLTR1Q9Y271 337 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 TRRAPQ9Y4A5 3859 aa6.23□□□□□ -1.41
RNU1-28P-201ENST00000383861 TRAV26-1A0A087WT03 109 aa6.22□□□□□ -1.41
RNU1-28P-201ENST00000383861 TRAV10A0A0B4J240 114 aa6.22□□□□□ -1.41
RNU1-28P-201ENST00000383861 TSHBP01222 138 aa6.22□□□□□ -1.41
RNU1-28P-201ENST00000383861 HTN3P15516 51 aa6.22□□□□□ -1.41
RNU1-28P-201ENST00000383861 BTF3P20290 206 aaKnown RBP6.22□□□□□ -1.41
RNU1-28P-201ENST00000383861 MRPL23Q16540 153 aaKnown RBP6.22□□□□□ -1.41
RNU1-28P-201ENST00000383861 ATP6V0E2Q8NHE4 81 aa6.22□□□□□ -1.41
RNU1-28P-201ENST00000383861 TOMM6Q96B49 74 aa6.22□□□□□ -1.41
RNU1-28P-201ENST00000383861 ICOSQ9Y6W8 199 aa6.22□□□□□ -1.41
RNU1-28P-201ENST00000383861 IFITM10A6NMD0 228 aa6.21□□□□□ -1.42
RNU1-28P-201ENST00000383861 H7C423 109 aa6.21□□□□□ -1.42
RNU1-28P-201ENST00000383861 NPSP0C0P6 89 aa6.21□□□□□ -1.42
RNU1-28P-201ENST00000383861 LINC00694P0DN24 101 aa6.21□□□□□ -1.42
RNU1-28P-201ENST00000383861 AKR1D1P51857 326 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms