RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 MORN3Q6PF18 240 aaPredicted RBP6.96□□□□□ -1.29
SMARCA1-202ENST00000371122 TMEM61Q8N0U2 210 aa6.96□□□□□ -1.29
SMARCA1-202ENST00000371122 MRAPQ8TCY5 172 aa6.96□□□□□ -1.29
SMARCA1-202ENST00000371122 TMEM190Q8WZ59 177 aa6.96□□□□□ -1.29
SMARCA1-202ENST00000371122 CRPP02741 224 aa6.96□□□□□ -1.3
SMARCA1-202ENST00000371122 KLF12Q9Y4X4 402 aa6.96□□□□□ -1.3
SMARCA1-202ENST00000371122 WI2-2373I1.2A0A1W2PRP0 233 aa6.96□□□□□ -1.3
SMARCA1-202ENST00000371122 C2orf70A6NJV1 201 aa6.96□□□□□ -1.3
SMARCA1-202ENST00000371122 EXPH5Q8NEV8 1989 aa6.95□□□□□ -1.3
SMARCA1-202ENST00000371122 CCL24O00175 119 aa6.95□□□□□ -1.3
SMARCA1-202ENST00000371122 XCL1P47992 114 aa6.95□□□□□ -1.3
SMARCA1-202ENST00000371122 KLF5Q13887 457 aaPredicted RBP6.95□□□□□ -1.3
SMARCA1-202ENST00000371122 C19orf71A6NCJ1 209 aa6.95□□□□□ -1.3
SMARCA1-202ENST00000371122 MRPL53Q96EL3 112 aaKnown RBP6.95□□□□□ -1.3
SMARCA1-202ENST00000371122 TET2Q6N021 2002 aaPredicted RBP6.95□□□□□ -1.3
SMARCA1-202ENST00000371122 C12orf74Q32Q52 190 aa6.95□□□□□ -1.3
SMARCA1-202ENST00000371122 A0A1W2PPM0 123 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 C16orf54Q6UWD8 224 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 C3orf56Q8N813 242 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 MBD6Q96DN6 1003 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 ANAPC13Q9BS18 74 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 TRAV8-4A0A0B4J246 113 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 A0A1W2PPR1 153 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 CFAP46Q8IYW2 2715 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 GATA3P23771 443 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 WFDC2Q14508 124 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 CEND1Q8N111 149 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 RASL10AQ92737 203 aa6.94□□□□□ -1.3
SMARCA1-202ENST00000371122 CSMD2Q7Z408 3487 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 TEX48A0A1B0GUV7 120 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 RBMY1BA6NDE4 496 aaKnown RBP6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 RBMY1EA6NEQ0 496 aaKnown RBP6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 RBMY1DP0C7P1 496 aaKnown RBP6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 RBMY1A1P0DJD3 496 aaKnown RBP6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 RBMY1CP0DJD4 496 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 WFDC11Q8NEX6 87 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 TEP1Q99973 2627 aaKnown RBP6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 INS-IGF2F8WCM5 200 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 EDN2P20800 178 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 GAGE2BQ13066 116 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 GAGE2EQ4V326 116 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 LINC01545Q5VT33 79 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 GAGE2DQ9UEU5 116 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 BSNQ9UPA5 3926 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 ANGP03950 147 aaKnown RBP6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 ELANEP08246 267 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 ATXN8Q156A1 80 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 PTH2Q96A98 100 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
SMARCA1-202ENST00000371122 CHD6Q8TD26 2715 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 LGALS1P09382 135 aaKnown RBP6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 GAGE2AQ6NT46 116 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 COPS9Q8WXC6 57 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 CPAMD8Q8IZJ3 1885 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 J3QKU1 62 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 ZFP2Q6ZN57 461 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 DEFB125Q8N687 156 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 C20orf173Q96LM9 149 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 ZNF48Q96MX3 618 aaPredicted RBP6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 LAMTOR3Q9UHA4 124 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 ASH1LQ9NR48 2969 aaKnown RBP6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 DAD1P61803 113 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 DEFB113Q30KQ7 82 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 Q9H8V8 135 aa6.92□□□□□ -1.3
SMARCA1-202ENST00000371122 C11orf86A6NJI1 115 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 PROK1P58294 105 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 CITED2Q99967 270 aaPredicted RBP6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 PRO1854Q9UHT4 67 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 TINCRA0A1B0GVN0 87 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 K7EP34 96 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 TMEM141Q96I45 108 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 TMEM243Q9BU79 118 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 C1QTNF4Q9BXJ3 329 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 SCRT2Q9NQ03 307 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 SMAD5-AS1Q9Y6J3 95 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 IGHV4-4A0A075B6R2 117 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 IGKV2D-26A0A0A0MRZ7 120 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 A0A1B0GXF2 115 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 TAX1BP3O14907 124 aa6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 NTN5Q8WTR8 489 aaPredicted RBP6.91□□□□□ -1.3
SMARCA1-202ENST00000371122 A4D1N5 150 aa6.9□□□□□ -1.3
SMARCA1-202ENST00000371122 IGHG2P01859 326 aa6.9□□□□□ -1.3
SMARCA1-202ENST00000371122 LINC01559Q495D7 138 aa6.9□□□□□ -1.3
SMARCA1-202ENST00000371122 C18orf65Q6ZTR6 163 aa6.9□□□□□ -1.3
SMARCA1-202ENST00000371122 RHODO00212 210 aa6.9□□□□□ -1.31
SMARCA1-202ENST00000371122 Q9HAA7 133 aa6.9□□□□□ -1.31
SMARCA1-202ENST00000371122 TRAV12-1A0A0B4J245 112 aa6.9□□□□□ -1.31
SMARCA1-202ENST00000371122 ODF1Q14990 250 aa6.9□□□□□ -1.31
SMARCA1-202ENST00000371122 SPATA12Q7Z6I5 190 aa6.9□□□□□ -1.31
SMARCA1-202ENST00000371122 LINC00574Q9H8X3 128 aa6.9□□□□□ -1.31
SMARCA1-202ENST00000371122 LEPROTO15243 131 aa6.89□□□□□ -1.31
SMARCA1-202ENST00000371122 AVPP01185 164 aa6.89□□□□□ -1.31
SMARCA1-202ENST00000371122 FOXI2Q6ZQN5 318 aa6.89□□□□□ -1.31
SMARCA1-202ENST00000371122 C20orf78Q9BR46 151 aa6.89□□□□□ -1.31
SMARCA1-202ENST00000371122 C11orf21Q9P2W6 132 aa6.89□□□□□ -1.31
SMARCA1-202ENST00000371122 FBXL19-AS1Q494R0 122 aa6.89□□□□□ -1.31
SMARCA1-202ENST00000371122 ZNF493Q6ZR52 646 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms