RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 KRTAP4-5Q9BYR2 181 aa12.62□□□□□ -0.39
CKS1B-203ENST00000368439 TRBV6-8A0A0A6YYG3 113 aa12.61□□□□□ -0.39
CKS1B-203ENST00000368439 PSCAO43653 123 aa12.61□□□□□ -0.39
CKS1B-203ENST00000368439 SMIM17P0DL12 118 aa12.61□□□□□ -0.39
CKS1B-203ENST00000368439 CTRLP40313 264 aa12.61□□□□□ -0.39
CKS1B-203ENST00000368439 TOR2AQ5JU69 321 aa12.61□□□□□ -0.39
CKS1B-203ENST00000368439 CNFNQ9BYD5 112 aa12.61□□□□□ -0.39
CKS1B-203ENST00000368439 RPP21Q9H633 154 aaKnown RBP12.61□□□□□ -0.39
CKS1B-203ENST00000368439 M0QY20 66 aa12.6□□□□□ -0.39
CKS1B-203ENST00000368439 NDUFS6O75380 124 aaKnown RBP12.6□□□□□ -0.39
CKS1B-203ENST00000368439 NTF3P20783 257 aa12.6□□□□□ -0.39
CKS1B-203ENST00000368439 WDR73Q6P4I2 378 aa12.6□□□□□ -0.39
CKS1B-203ENST00000368439 DNAJC30Q96LL9 226 aa12.6□□□□□ -0.39
CKS1B-203ENST00000368439 FAM210AQ96ND0 272 aa12.6□□□□□ -0.39
CKS1B-203ENST00000368439 CHCHD7Q9BUK0 85 aa12.6□□□□□ -0.39
CKS1B-203ENST00000368439 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
CKS1B-203ENST00000368439 SUMO4Q6EEV6 95 aa12.59□□□□□ -0.39
CKS1B-203ENST00000368439 NTM-AS1Q6ZSK4 140 aa12.59□□□□□ -0.39
CKS1B-203ENST00000368439 MGPP08493 103 aa12.58□□□□□ -0.4
CKS1B-203ENST00000368439 KRTAP10-1P60331 282 aa12.58□□□□□ -0.4
CKS1B-203ENST00000368439 WFDC2Q14508 124 aa12.58□□□□□ -0.4
CKS1B-203ENST00000368439 FAM231DQ6ZW35 169 aa12.58□□□□□ -0.4
CKS1B-203ENST00000368439 MAPKAPK5-AS1Q8N8E1 139 aa12.58□□□□□ -0.4
CKS1B-203ENST00000368439 GTSF1Q8WW33 167 aa12.58□□□□□ -0.4
CKS1B-203ENST00000368439 TRGC1P0CF51 173 aa12.57□□□□□ -0.4
CKS1B-203ENST00000368439 Q8N814 137 aa12.57□□□□□ -0.4
CKS1B-203ENST00000368439 TM2D2Q9BX73 214 aa12.57□□□□□ -0.4
CKS1B-203ENST00000368439 EIF5A2Q9GZV4 153 aaKnown RBP12.57□□□□□ -0.4
CKS1B-203ENST00000368439 DPH3P1Q9H4G8 78 aa12.57□□□□□ -0.4
CKS1B-203ENST00000368439 KLK12Q9UKR0 248 aa12.57□□□□□ -0.4
CKS1B-203ENST00000368439 URGCP-MRPS24S4R325 110 aa12.57□□□□□ -0.4
CKS1B-203ENST00000368439 FAT1Q14517 4588 aa12.56□□□□□ -0.4
CKS1B-203ENST00000368439 SRP19P09132 144 aaKnown RBP12.56□□□□□ -0.4
CKS1B-203ENST00000368439 A0A087WX48 190 aa12.55□□□□□ -0.4
CKS1B-203ENST00000368439 CEBPGP53567 150 aa12.55□□□□□ -0.4
CKS1B-203ENST00000368439 H7C1H1 209 aa12.54□□□□□ -0.4
CKS1B-203ENST00000368439 GATCO43716 136 aaKnown RBP12.54□□□□□ -0.4
CKS1B-203ENST00000368439 MPV17L2Q567V2 206 aa12.54□□□□□ -0.4
CKS1B-203ENST00000368439 TMEM97Q5BJF2 176 aa12.54□□□□□ -0.4
CKS1B-203ENST00000368439 ATRAIDQ6UW56 229 aa12.54□□□□□ -0.4
CKS1B-203ENST00000368439 LINC01551Q86U37 167 aa12.54□□□□□ -0.4
CKS1B-203ENST00000368439 NTN5Q8WTR8 489 aaPredicted RBP12.54□□□□□ -0.4
CKS1B-203ENST00000368439 XGP55808 180 aa12.53□□□□□ -0.4
CKS1B-203ENST00000368439 ELOBQ15370 118 aa12.53□□□□□ -0.4
CKS1B-203ENST00000368439 TWIST1Q15672 202 aa12.53□□□□□ -0.4
CKS1B-203ENST00000368439 RASL11AQ6T310 242 aa12.53□□□□□ -0.4
CKS1B-203ENST00000368439 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.53□□□□□ -0.4
CKS1B-203ENST00000368439 UBE2WQ96B02 151 aa12.53□□□□□ -0.4
CKS1B-203ENST00000368439 SMIM7Q9BQ49 75 aa12.53□□□□□ -0.4
CKS1B-203ENST00000368439 TMEM262E9PQX1 116 aa12.52□□□□□ -0.41
CKS1B-203ENST00000368439 GCSHP23434 173 aa12.52□□□□□ -0.41
CKS1B-203ENST00000368439 FOXA3P55318 350 aaPredicted RBP12.52□□□□□ -0.41
CKS1B-203ENST00000368439 CT83Q5H943 113 aa12.52□□□□□ -0.41
CKS1B-203ENST00000368439 ENHOQ6UWT2 76 aa12.52□□□□□ -0.41
CKS1B-203ENST00000368439 Q8N1X5 172 aa12.52□□□□□ -0.41
CKS1B-203ENST00000368439 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
CKS1B-203ENST00000368439 IGLV5-52A0A0A0MRZ9 124 aa12.51□□□□□ -0.41
CKS1B-203ENST00000368439 IQCJQ1A5X6 159 aa12.51□□□□□ -0.41
CKS1B-203ENST00000368439 KCNIP4Q6PIL6 250 aa12.51□□□□□ -0.41
CKS1B-203ENST00000368439 TEX261Q6UWH6 196 aa12.51□□□□□ -0.41
CKS1B-203ENST00000368439 CHCHD5Q9BSY4 110 aa12.51□□□□□ -0.41
CKS1B-203ENST00000368439 NIT2Q9NQR4 276 aa12.51□□□□□ -0.41
CKS1B-203ENST00000368439 ZNF727A8MUV8 499 aa12.5□□□□□ -0.41
CKS1B-203ENST00000368439 A8MWL6 223 aa12.5□□□□□ -0.41
CKS1B-203ENST00000368439 Q8N976 141 aa12.5□□□□□ -0.41
CKS1B-203ENST00000368439 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
CKS1B-203ENST00000368439 BAALCQ8WXS3 180 aa12.5□□□□□ -0.41
CKS1B-203ENST00000368439 RMI2Q96E14 147 aa12.5□□□□□ -0.41
CKS1B-203ENST00000368439 TRBV25-1A0A075B6N4 114 aa12.49□□□□□ -0.41
CKS1B-203ENST00000368439 IGKV2D-24A0A075B6R9 120 aa12.49□□□□□ -0.41
CKS1B-203ENST00000368439 C9JQL5 133 aa12.49□□□□□ -0.41
CKS1B-203ENST00000368439 LECT2O14960 151 aa12.49□□□□□ -0.41
CKS1B-203ENST00000368439 Q0VG73 95 aa12.49□□□□□ -0.41
CKS1B-203ENST00000368439 C15orf54Q8N8G6 183 aa12.49□□□□□ -0.41
CKS1B-203ENST00000368439 PGLYRP4Q96LB8 373 aa12.49□□□□□ -0.41
CKS1B-203ENST00000368439 TRAV26-2A0A0B4J265 109 aa12.48□□□□□ -0.41
CKS1B-203ENST00000368439 IGHV1-24A0A0C4DH33 117 aa12.48□□□□□ -0.41
CKS1B-203ENST00000368439 PKIAP61925 76 aa12.48□□□□□ -0.41
CKS1B-203ENST00000368439 OSTCQ9NRP0 149 aa12.48□□□□□ -0.41
CKS1B-203ENST00000368439 ANGP03950 147 aaKnown RBP12.47□□□□□ -0.41
CKS1B-203ENST00000368439 RBX1P62877 108 aa12.47□□□□□ -0.41
CKS1B-203ENST00000368439 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
CKS1B-203ENST00000368439 GAGE6Q13070 117 aa12.47□□□□□ -0.41
CKS1B-203ENST00000368439 TSKUQ8WUA8 353 aa12.47□□□□□ -0.41
CKS1B-203ENST00000368439 FRZBQ92765 325 aa12.47□□□□□ -0.41
CKS1B-203ENST00000368439 PRR34Q9NV39 138 aa12.47□□□□□ -0.41
CKS1B-203ENST00000368439 GFRA4Q9GZZ7 299 aa12.46□□□□□ -0.41
CKS1B-203ENST00000368439 ISOC2Q96AB3 205 aa12.45□□□□□ -0.42
CKS1B-203ENST00000368439 V9GYV3 84 aa12.45□□□□□ -0.42
CKS1B-203ENST00000368439 FAM231BA6NCW3 169 aa12.44□□□□□ -0.42
CKS1B-203ENST00000368439 HIGD1CA8MV81 97 aa12.44□□□□□ -0.42
CKS1B-203ENST00000368439 CRPP02741 224 aa12.44□□□□□ -0.42
CKS1B-203ENST00000368439 RPL23P62829 140 aaKnown RBP12.44□□□□□ -0.42
CKS1B-203ENST00000368439 TMEM241Q24JQ0 296 aa12.44□□□□□ -0.42
CKS1B-203ENST00000368439 FAM74A3Q4VXF1 159 aa12.44□□□□□ -0.42
CKS1B-203ENST00000368439 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
CKS1B-203ENST00000368439 RPL39LQ96EH5 51 aaKnown RBP12.44□□□□□ -0.42
CKS1B-203ENST00000368439 MIAQ16674 131 aa12.43□□□□□ -0.42
CKS1B-203ENST00000368439 KRTAP26-1Q6PEX3 210 aa12.43□□□□□ -0.42
CKS1B-203ENST00000368439 TMEM243Q9BU79 118 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms