RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ATP6V0E1O15342 81 aa8.69□□□□□ -1.02
CDC42BPA-205ENST00000366769 IGHV4-59P01825 116 aa8.68□□□□□ -1.02
CDC42BPA-205ENST00000366769 TEX36Q5VZQ5 186 aa8.68□□□□□ -1.02
CDC42BPA-205ENST00000366769 LYPD1Q8N2G4 141 aa8.68□□□□□ -1.02
CDC42BPA-205ENST00000366769 LINC00643Q86TS7 51 aa8.68□□□□□ -1.02
CDC42BPA-205ENST00000366769 GAFA1Q96PS6 74 aa8.68□□□□□ -1.02
CDC42BPA-205ENST00000366769 C20orf173Q96LM9 149 aa8.67□□□□□ -1.02
CDC42BPA-205ENST00000366769 SRRM5B3KS81 715 aa8.67□□□□□ -1.02
CDC42BPA-205ENST00000366769 MSRB1Q9NZV6 116 aa8.67□□□□□ -1.02
CDC42BPA-205ENST00000366769 MRPL36Q9P0J6 103 aaKnown RBP8.67□□□□□ -1.02
CDC42BPA-205ENST00000366769 MSMBP08118 114 aa8.67□□□□□ -1.02
CDC42BPA-205ENST00000366769 C17orf77Q96MU5 243 aa8.67□□□□□ -1.02
CDC42BPA-205ENST00000366769 IGKV2D-26A0A0A0MRZ7 120 aa8.67□□□□□ -1.02
CDC42BPA-205ENST00000366769 ZNF883P0CG24 379 aa8.67□□□□□ -1.02
CDC42BPA-205ENST00000366769 PDE6HQ13956 83 aa8.67□□□□□ -1.02
CDC42BPA-205ENST00000366769 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
CDC42BPA-205ENST00000366769 ENHOQ6UWT2 76 aa8.66□□□□□ -1.02
CDC42BPA-205ENST00000366769 FLVCR1-AS1Q8TAF5 88 aa8.66□□□□□ -1.02
CDC42BPA-205ENST00000366769 Q0VFX4 171 aa8.66□□□□□ -1.02
CDC42BPA-205ENST00000366769 COL4A5P29400 1685 aa8.66□□□□□ -1.02
CDC42BPA-205ENST00000366769 DYNAPQ8N1N2 210 aa8.66□□□□□ -1.02
CDC42BPA-205ENST00000366769 ZNF134P52741 427 aa8.66□□□□□ -1.02
CDC42BPA-205ENST00000366769 IGF2RP11717 2491 aa8.66□□□□□ -1.02
CDC42BPA-205ENST00000366769 GYPEP15421 78 aa8.66□□□□□ -1.02
CDC42BPA-205ENST00000366769 SP5Q6BEB4 398 aaPredicted RBP8.66□□□□□ -1.02
CDC42BPA-205ENST00000366769 USP9YO00507 2555 aaPredicted RBP8.65□□□□□ -1.02
CDC42BPA-205ENST00000366769 NCR3O14931 201 aa8.65□□□□□ -1.02
CDC42BPA-205ENST00000366769 CFAP126Q5VTH2 177 aa8.65□□□□□ -1.02
CDC42BPA-205ENST00000366769 ESM1Q9NQ30 184 aa8.65□□□□□ -1.02
CDC42BPA-205ENST00000366769 USP24Q9UPU5 2620 aa8.65□□□□□ -1.02
CDC42BPA-205ENST00000366769 H3BT86 120 aa8.65□□□□□ -1.02
CDC42BPA-205ENST00000366769 HIST2H2BCQ6DN03 193 aa8.65□□□□□ -1.02
CDC42BPA-205ENST00000366769 LINC00310P59036 64 aa8.65□□□□□ -1.03
CDC42BPA-205ENST00000366769 NRGNQ92686 78 aa8.65□□□□□ -1.03
CDC42BPA-205ENST00000366769 LOXP28300 417 aaPredicted RBP8.65□□□□□ -1.03
CDC42BPA-205ENST00000366769 PRR25Q96S07 402 aa8.65□□□□□ -1.03
CDC42BPA-205ENST00000366769 CXCL5P42830 114 aa8.64□□□□□ -1.03
CDC42BPA-205ENST00000366769 NDUFA4L2Q9NRX3 87 aa8.64□□□□□ -1.03
CDC42BPA-205ENST00000366769 RNF5Q99942 180 aa8.64□□□□□ -1.03
CDC42BPA-205ENST00000366769 CTSGP08311 255 aa8.64□□□□□ -1.03
CDC42BPA-205ENST00000366769 IGKV1D-17A0A075B6S4 117 aa8.64□□□□□ -1.03
CDC42BPA-205ENST00000366769 NPBQ8NG41 125 aa8.64□□□□□ -1.03
CDC42BPA-205ENST00000366769 F8W735 103 aaPredicted RBP8.64□□□□□ -1.03
CDC42BPA-205ENST00000366769 DEFB136Q30KP8 78 aa8.64□□□□□ -1.03
CDC42BPA-205ENST00000366769 CCL18P55774 89 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 DIAPH2-AS1Q14236 149 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 ELANEP08246 267 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 TPSG1Q9NRR2 321 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 TMEM14CQ9P0S9 112 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 E7EQL1 145 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 TRIAP1O43715 76 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 SERP2Q8N6R1 65 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 TMEM105Q8N8V8 129 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 MAPKAPK5-AS1Q8N8E1 139 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 GGNQ86UU5 652 aa8.63□□□□□ -1.03
CDC42BPA-205ENST00000366769 WT1-ASQ06250 92 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 IGHV1-69DA0A0B4J2H0 117 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 C11orf86A6NJI1 115 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 IGHV1-69P01742 117 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 COX7A2LO14548 114 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 C4orf26Q17RF5 130 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 H3BRN7 92 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 NFE4Q86UQ8 179 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 SPRY4Q9C004 299 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 GP9P14770 177 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 IGLV3-32A0A0A0MS00 114 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 PIFOQ8TCI5 191 aa8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 MRPL53Q96EL3 112 aaKnown RBP8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 OPRPNQ99935 248 aaPredicted RBP8.62□□□□□ -1.03
CDC42BPA-205ENST00000366769 Q8N976 141 aa8.61□□□□□ -1.03
CDC42BPA-205ENST00000366769 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.61□□□□□ -1.03
CDC42BPA-205ENST00000366769 AJUBAQ96IF1 538 aa8.61□□□□□ -1.03
CDC42BPA-205ENST00000366769 WI2-2373I1.2A0A1W2PRP0 233 aa8.61□□□□□ -1.03
CDC42BPA-205ENST00000366769 SND1-IT1Q9HBX3 110 aa8.61□□□□□ -1.03
CDC42BPA-205ENST00000366769 LECT2O14960 151 aa8.61□□□□□ -1.03
CDC42BPA-205ENST00000366769 GNRH2O43555 120 aa8.61□□□□□ -1.03
CDC42BPA-205ENST00000366769 A0A1B0GXF2 115 aa8.6□□□□□ -1.03
CDC42BPA-205ENST00000366769 PRR4Q16378 134 aa8.6□□□□□ -1.03
CDC42BPA-205ENST00000366769 A0A0J9YWU9 116 aa8.6□□□□□ -1.03
CDC42BPA-205ENST00000366769 HIGD2BQ4VC39 106 aa8.6□□□□□ -1.03
CDC42BPA-205ENST00000366769 AGPAT4-IT1Q9H0P7 198 aa8.6□□□□□ -1.03
CDC42BPA-205ENST00000366769 CEP295Q9C0D2 2601 aa8.6□□□□□ -1.03
CDC42BPA-205ENST00000366769 COX7CP15954 63 aa8.6□□□□□ -1.03
CDC42BPA-205ENST00000366769 SOSTDC1Q6X4U4 206 aa8.6□□□□□ -1.03
CDC42BPA-205ENST00000366769 SCXQ7RTU7 201 aa8.6□□□□□ -1.03
CDC42BPA-205ENST00000366769 ZNF524Q96C55 264 aa8.6□□□□□ -1.03
CDC42BPA-205ENST00000366769 CCL24O00175 119 aa8.59□□□□□ -1.03
CDC42BPA-205ENST00000366769 J3QLI3 93 aa8.59□□□□□ -1.03
CDC42BPA-205ENST00000366769 TRBV12-3P01733 135 aa8.59□□□□□ -1.03
CDC42BPA-205ENST00000366769 RNF138Q8WVD3 245 aa8.59□□□□□ -1.03
CDC42BPA-205ENST00000366769 USP17L23D6RBM5 183 aa8.59□□□□□ -1.03
CDC42BPA-205ENST00000366769 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
CDC42BPA-205ENST00000366769 PMAIP1Q13794 54 aa8.59□□□□□ -1.03
CDC42BPA-205ENST00000366769 C11orf1Q9H5F2 150 aa8.59□□□□□ -1.03
CDC42BPA-205ENST00000366769 PRR20EP86478 221 aa8.59□□□□□ -1.04
CDC42BPA-205ENST00000366769 PRR20CP86479 221 aa8.59□□□□□ -1.04
CDC42BPA-205ENST00000366769 PRR20DP86480 221 aa8.59□□□□□ -1.04
CDC42BPA-205ENST00000366769 PRR20BP86481 221 aa8.59□□□□□ -1.04
CDC42BPA-205ENST00000366769 PRR20AP86496 221 aa8.59□□□□□ -1.04
CDC42BPA-205ENST00000366769 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms