RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 NDUFA4L2Q9NRX3 87 aa7.55□□□□□ -1.2
CHD3-202ENST00000358181 RIF1Q5UIP0 2472 aaKnown RBP7.55□□□□□ -1.2
CHD3-202ENST00000358181 IGLC7A0M8Q6 106 aa7.55□□□□□ -1.2
CHD3-202ENST00000358181 K7EP34 96 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 MYCNOSP40205 109 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 REG3AQ06141 175 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 LINC00337Q8N6G1 96 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 NBASA2RRP1 2371 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 A4D1N5 150 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 ANAPC1Q9H1A4 1944 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 NCKAP5O14513 1909 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 C16orf54Q6UWD8 224 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 Q6ZR03 302 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 Q8N1Y9 231 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 FAM30AQ9NZY2 134 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 PROK2Q9HC23 129 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 A6NDX4 124 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 C17orf58Q2M2W7 97 aa7.54□□□□□ -1.2
CHD3-202ENST00000358181 A0A0J9YXV3 536 aa7.53□□□□□ -1.2
CHD3-202ENST00000358181 TMEM256-PLSCR3K7ERE1 68 aa7.53□□□□□ -1.2
CHD3-202ENST00000358181 H0YGX0 51 aa7.53□□□□□ -1.2
CHD3-202ENST00000358181 C2orf70A6NJV1 201 aa7.53□□□□□ -1.2
CHD3-202ENST00000358181 H3BQ85 93 aa7.53□□□□□ -1.2
CHD3-202ENST00000358181 SPANXDQ9BXN6 97 aa7.53□□□□□ -1.2
CHD3-202ENST00000358181 IGHV1-58A0A0C4DH39 117 aa7.53□□□□□ -1.2
CHD3-202ENST00000358181 LY6LH3BQJ8 138 aa7.53□□□□□ -1.2
CHD3-202ENST00000358181 CEMP1Q6PRD7 247 aaPredicted RBP7.53□□□□□ -1.2
CHD3-202ENST00000358181 C18orf32Q8TCD1 76 aa7.53□□□□□ -1.2
CHD3-202ENST00000358181 EML6Q6ZMW3 1958 aa7.53□□□□□ -1.2
CHD3-202ENST00000358181 P0DMU3 169 aa7.52□□□□□ -1.2
CHD3-202ENST00000358181 FAM231AP0DMU4 169 aa7.52□□□□□ -1.2
CHD3-202ENST00000358181 FAM231CP0DMU5 169 aa7.52□□□□□ -1.2
CHD3-202ENST00000358181 ZFAND3Q9H8U3 227 aa7.52□□□□□ -1.21
CHD3-202ENST00000358181 ZNF706Q9Y5V0 76 aaPredicted RBP7.52□□□□□ -1.21
CHD3-202ENST00000358181 ATOX1O00244 68 aa7.52□□□□□ -1.21
CHD3-202ENST00000358181 LOXL1Q08397 574 aaPredicted RBP7.52□□□□□ -1.21
CHD3-202ENST00000358181 SPATA12Q7Z6I5 190 aa7.52□□□□□ -1.21
CHD3-202ENST00000358181 C20orf78Q9BR46 151 aa7.52□□□□□ -1.21
CHD3-202ENST00000358181 POM121L12Q8N7R1 296 aa7.52□□□□□ -1.21
CHD3-202ENST00000358181 FAM222AQ5U5X8 452 aa7.52□□□□□ -1.21
CHD3-202ENST00000358181 CTSZQ9UBR2 303 aa7.52□□□□□ -1.21
CHD3-202ENST00000358181 J3KT08 172 aa7.52□□□□□ -1.21
CHD3-202ENST00000358181 TMEM14EPQ6UXP3 125 aa7.52□□□□□ -1.21
CHD3-202ENST00000358181 IGLV5-52A0A0A0MRZ9 124 aa7.51□□□□□ -1.21
CHD3-202ENST00000358181 Q8N9L7 120 aa7.51□□□□□ -1.21
CHD3-202ENST00000358181 TNRC6AQ8NDV7 1962 aaKnown RBP7.51□□□□□ -1.21
CHD3-202ENST00000358181 LINC00526Q96FQ7 95 aa7.51□□□□□ -1.21
CHD3-202ENST00000358181 TEN1Q86WV5 123 aa7.51□□□□□ -1.21
CHD3-202ENST00000358181 NLRC5Q86WI3 1866 aa7.51□□□□□ -1.21
CHD3-202ENST00000358181 QRFPP83859 136 aa7.5□□□□□ -1.21
CHD3-202ENST00000358181 H3BUA1 57 aa7.5□□□□□ -1.21
CHD3-202ENST00000358181 C11orf52Q96A22 123 aa7.5□□□□□ -1.21
CHD3-202ENST00000358181 COX8AP10176 69 aa7.5□□□□□ -1.21
CHD3-202ENST00000358181 NDUFA11Q86Y39 141 aa7.5□□□□□ -1.21
CHD3-202ENST00000358181 AGPAT4-IT1Q9H0P7 198 aa7.5□□□□□ -1.21
CHD3-202ENST00000358181 SIVA1O15304 175 aa7.5□□□□□ -1.21
CHD3-202ENST00000358181 CHCHD10Q8WYQ3 142 aaPredicted RBP7.5□□□□□ -1.21
CHD3-202ENST00000358181 RITA1Q96K30 269 aa7.5□□□□□ -1.21
CHD3-202ENST00000358181 GOLGB1Q14789 3259 aaKnown RBP7.49□□□□□ -1.21
CHD3-202ENST00000358181 CXCL5P42830 114 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 ESRGQ1W209 222 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 SDIM1Q6ZPB5 146 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 NFE4Q86UQ8 179 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 PRO0255Q9UI72 69 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 DENND4CQ5VZ89 1909 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 TIMM17BO60830 172 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 TMEM190Q8WZ59 177 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 ENHOQ6UWT2 76 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 SNURFQ9Y675 71 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 LGALS9BQ3B8N2 356 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 LGALS9CQ6DKI2 356 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 FAM215AQ9Y5M1 114 aa7.49□□□□□ -1.21
CHD3-202ENST00000358181 GPR179Q6PRD1 2367 aa7.48□□□□□ -1.21
CHD3-202ENST00000358181 V9GYY9 64 aa7.48□□□□□ -1.21
CHD3-202ENST00000358181 WT1-ASQ06250 92 aa7.48□□□□□ -1.21
CHD3-202ENST00000358181 TRAV1-1A0A0B4J248 108 aa7.48□□□□□ -1.21
CHD3-202ENST00000358181 FNDC10F2Z333 226 aa7.48□□□□□ -1.21
CHD3-202ENST00000358181 KIAA1549Q9HCM3 1950 aa7.48□□□□□ -1.21
CHD3-202ENST00000358181 CTRLP40313 264 aa7.47□□□□□ -1.21
CHD3-202ENST00000358181 NANOS2P60321 138 aaKnown RBP7.47□□□□□ -1.21
CHD3-202ENST00000358181 PLA2G2CQ5R387 149 aa7.47□□□□□ -1.21
CHD3-202ENST00000358181 PRLHP81277 87 aa7.47□□□□□ -1.21
CHD3-202ENST00000358181 ZNF843Q8N446 348 aa7.47□□□□□ -1.21
CHD3-202ENST00000358181 PIK3CD-AS1Q5SR53 167 aa7.47□□□□□ -1.21
CHD3-202ENST00000358181 LY6G6DO95868 133 aa7.47□□□□□ -1.21
CHD3-202ENST00000358181 SHANK1Q9Y566 2161 aa7.47□□□□□ -1.21
CHD3-202ENST00000358181 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
CHD3-202ENST00000358181 XGP55808 180 aa7.47□□□□□ -1.21
CHD3-202ENST00000358181 NOTCH3Q9UM47 2321 aa7.46□□□□□ -1.21
CHD3-202ENST00000358181 OBSL1O75147 1896 aa7.46□□□□□ -1.21
CHD3-202ENST00000358181 SHISA2Q6UWI4 295 aa7.46□□□□□ -1.21
CHD3-202ENST00000358181 RNF152Q8N8N0 203 aa7.46□□□□□ -1.21
CHD3-202ENST00000358181 Q8TCH9 128 aa7.46□□□□□ -1.21
CHD3-202ENST00000358181 FXYD5Q96DB9 178 aa7.46□□□□□ -1.21
CHD3-202ENST00000358181 TCL1BO95988 128 aa7.46□□□□□ -1.22
CHD3-202ENST00000358181 MDFICQ9P1T7 246 aa7.46□□□□□ -1.22
CHD3-202ENST00000358181 CLUHP3Q96NS8 147 aa7.46□□□□□ -1.22
CHD3-202ENST00000358181 PLA2G2EQ9NZK7 142 aa7.46□□□□□ -1.22
CHD3-202ENST00000358181 PCNX2A6NKB5 2137 aa7.46□□□□□ -1.22
CHD3-202ENST00000358181 TRAV10A0A0B4J240 114 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms