RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 ZNF471Q9BX82 626 aaPredicted RBP10.53□□□□□ -0.72
H3F3C-201ENST00000340398 A0A1B0GV50 99 aa10.52□□□□□ -0.73
H3F3C-201ENST00000340398 PANO1I0J062 215 aa10.52□□□□□ -0.73
H3F3C-201ENST00000340398 GAGE6Q13070 117 aa10.52□□□□□ -0.73
H3F3C-201ENST00000340398 KRTAP26-1Q6PEX3 210 aa10.52□□□□□ -0.73
H3F3C-201ENST00000340398 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.52□□□□□ -0.73
H3F3C-201ENST00000340398 UBR4Q5T4S7 5183 aa10.52□□□□□ -0.73
H3F3C-201ENST00000340398 SCO2A0A1W2PP80 73 aa10.51□□□□□ -0.73
H3F3C-201ENST00000340398 ARPC5O15511 151 aa10.51□□□□□ -0.73
H3F3C-201ENST00000340398 LINC00269Q8N2A0 174 aa10.51□□□□□ -0.73
H3F3C-201ENST00000340398 MLST8Q9BVC4 326 aa10.51□□□□□ -0.73
H3F3C-201ENST00000340398 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
H3F3C-201ENST00000340398 PLA2G2DQ9UNK4 145 aa10.51□□□□□ -0.73
H3F3C-201ENST00000340398 SNAI2O43623 268 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 RBX1P62877 108 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 MIAQ16674 131 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 SPANXN1Q5VSR9 72 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 DGAT2L7PQ6IED9 249 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 BAGE2Q86Y30 109 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 C9orf163Q8N9P6 203 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 SFT2D1Q8WV19 159 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 TCEAL7Q9BRU2 100 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 DERL1Q9BUN8 251 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 KIF25-AS1Q9Y6Z4 181 aa10.5□□□□□ -0.73
H3F3C-201ENST00000340398 SMLR1H3BR10 107 aa10.49□□□□□ -0.73
H3F3C-201ENST00000340398 SDIM1Q6ZPB5 146 aa10.49□□□□□ -0.73
H3F3C-201ENST00000340398 PRR34Q9NV39 138 aa10.49□□□□□ -0.73
H3F3C-201ENST00000340398 OR5AL1P0C617 328 aa10.48□□□□□ -0.73
H3F3C-201ENST00000340398 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.48□□□□□ -0.73
H3F3C-201ENST00000340398 MBD3L1Q8WWY6 194 aa10.48□□□□□ -0.73
H3F3C-201ENST00000340398 VAX2Q9UIW0 290 aa10.48□□□□□ -0.73
H3F3C-201ENST00000340398 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
H3F3C-201ENST00000340398 S100A9P06702 114 aaKnown RBP10.47□□□□□ -0.73
H3F3C-201ENST00000340398 CXCL1P09341 107 aa10.47□□□□□ -0.73
H3F3C-201ENST00000340398 TMUB2Q71RG4 321 aa10.47□□□□□ -0.73
H3F3C-201ENST00000340398 FAM213BQ8TBF2 198 aa10.47□□□□□ -0.73
H3F3C-201ENST00000340398 GZMBP10144 247 aa10.46□□□□□ -0.73
H3F3C-201ENST00000340398 TRBV25-1A0A075B6N4 114 aa10.45□□□□□ -0.74
H3F3C-201ENST00000340398 SMIM17P0DL12 118 aa10.45□□□□□ -0.74
H3F3C-201ENST00000340398 RAB5CP51148 216 aa10.45□□□□□ -0.74
H3F3C-201ENST00000340398 PKIAP61925 76 aa10.45□□□□□ -0.74
H3F3C-201ENST00000340398 TMEM97Q5BJF2 176 aa10.45□□□□□ -0.74
H3F3C-201ENST00000340398 MT1HL1P0DM35 61 aa10.44□□□□□ -0.74
H3F3C-201ENST00000340398 C20orf203Q8NBC4 194 aa10.44□□□□□ -0.74
H3F3C-201ENST00000340398 M0QY20 66 aa10.43□□□□□ -0.74
H3F3C-201ENST00000340398 SLPIP03973 132 aa10.43□□□□□ -0.74
H3F3C-201ENST00000340398 MGPP08493 103 aa10.43□□□□□ -0.74
H3F3C-201ENST00000340398 REG3AQ06141 175 aa10.43□□□□□ -0.74
H3F3C-201ENST00000340398 IQCJQ1A5X6 159 aa10.43□□□□□ -0.74
H3F3C-201ENST00000340398 KCNRGQ8N5I3 272 aa10.43□□□□□ -0.74
H3F3C-201ENST00000340398 TPPP3Q9BW30 176 aa10.43□□□□□ -0.74
H3F3C-201ENST00000340398 GFRA4Q9GZZ7 299 aa10.43□□□□□ -0.74
H3F3C-201ENST00000340398 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
H3F3C-201ENST00000340398 IGHV1-24A0A0C4DH33 117 aa10.42□□□□□ -0.74
H3F3C-201ENST00000340398 hDV102S1A0JD36 115 aa10.42□□□□□ -0.74
H3F3C-201ENST00000340398 PFDN1O60925 122 aa10.42□□□□□ -0.74
H3F3C-201ENST00000340398 RPL35P42766 123 aaKnown RBP10.42□□□□□ -0.74
H3F3C-201ENST00000340398 CLRN3Q8NCR9 226 aa10.42□□□□□ -0.74
H3F3C-201ENST00000340398 DPH3Q96FX2 82 aa10.42□□□□□ -0.74
H3F3C-201ENST00000340398 H2AFB1P0C5Y9 115 aa10.41□□□□□ -0.74
H3F3C-201ENST00000340398 CHTF8P0CG12 524 aa10.41□□□□□ -0.74
H3F3C-201ENST00000340398 NKX2-5P52952 324 aaPredicted RBP10.41□□□□□ -0.74
H3F3C-201ENST00000340398 CCL20P78556 96 aa10.41□□□□□ -0.74
H3F3C-201ENST00000340398 SUMO4Q6EEV6 95 aa10.41□□□□□ -0.74
H3F3C-201ENST00000340398 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
H3F3C-201ENST00000340398 UMAD1C9J7I0 102 aa10.4□□□□□ -0.74
H3F3C-201ENST00000340398 IGLC6P0CF74 106 aa10.39□□□□□ -0.75
H3F3C-201ENST00000340398 CNBPP62633 177 aaKnown RBP10.39□□□□□ -0.75
H3F3C-201ENST00000340398 CIRBPQ14011 172 aaKnown RBP10.39□□□□□ -0.75
H3F3C-201ENST00000340398 FER1L6-AS1Q8NA97 138 aa10.39□□□□□ -0.75
H3F3C-201ENST00000340398 OR2D3Q8NGH3 330 aa10.39□□□□□ -0.75
H3F3C-201ENST00000340398 A0A087WYN8 130 aa10.38□□□□□ -0.75
H3F3C-201ENST00000340398 A0A0D9SG52 128 aa10.38□□□□□ -0.75
H3F3C-201ENST00000340398 RAB19A4D1S5 217 aa10.38□□□□□ -0.75
H3F3C-201ENST00000340398 TMEM243Q9BU79 118 aa10.38□□□□□ -0.75
H3F3C-201ENST00000340398 GNG13Q9P2W3 67 aa10.38□□□□□ -0.75
H3F3C-201ENST00000340398 TRAV8-4A0A0B4J246 113 aa10.37□□□□□ -0.75
H3F3C-201ENST00000340398 A0A1B0GUV1 79 aa10.37□□□□□ -0.75
H3F3C-201ENST00000340398 P01737 135 aa10.37□□□□□ -0.75
H3F3C-201ENST00000340398 ZNF345Q14585 488 aa10.37□□□□□ -0.75
H3F3C-201ENST00000340398 CENPWQ5EE01 88 aa10.37□□□□□ -0.75
H3F3C-201ENST00000340398 Q6ZRU5 148 aa10.37□□□□□ -0.75
H3F3C-201ENST00000340398 IGHV3-64A0A075B6Q5 118 aa10.36□□□□□ -0.75
H3F3C-201ENST00000340398 C19orf71A6NCJ1 209 aa10.36□□□□□ -0.75
H3F3C-201ENST00000340398 H7C1H1 209 aa10.36□□□□□ -0.75
H3F3C-201ENST00000340398 RASL11AQ6T310 242 aa10.36□□□□□ -0.75
H3F3C-201ENST00000340398 AP5S1Q9NUS5 200 aa10.36□□□□□ -0.75
H3F3C-201ENST00000340398 TNXBP22105 4242 aa10.36□□□□□ -0.75
H3F3C-201ENST00000340398 CACNG7P62955 275 aa10.35□□□□□ -0.75
H3F3C-201ENST00000340398 RGS21Q2M5E4 152 aa10.35□□□□□ -0.75
H3F3C-201ENST00000340398 LYZL1Q6UWQ5 148 aa10.35□□□□□ -0.75
H3F3C-201ENST00000340398 C11orf52Q96A22 123 aa10.35□□□□□ -0.75
H3F3C-201ENST00000340398 NIT2Q9NQR4 276 aa10.35□□□□□ -0.75
H3F3C-201ENST00000340398 KANTRA0A1W2PQU2 76 aa10.34□□□□□ -0.75
H3F3C-201ENST00000340398 HMSDA8MTL9 139 aa10.34□□□□□ -0.75
H3F3C-201ENST00000340398 BCL2L11O43521 198 aa10.34□□□□□ -0.75
H3F3C-201ENST00000340398 NTF3P20783 257 aa10.34□□□□□ -0.75
H3F3C-201ENST00000340398 RPS20P60866 119 aaKnown RBP10.34□□□□□ -0.75
H3F3C-201ENST00000340398 SPACA4Q8TDM5 124 aa10.34□□□□□ -0.75
H3F3C-201ENST00000340398 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 304.1 ms