RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TRAV26-1A0A087WT03 109 aa15.05■□□□□ -0
TPM1-204ENST00000334895 TNFRSF6BO95407 300 aa15.05■□□□□ -0
TPM1-204ENST00000334895 RHOHQ15669 191 aa15.05■□□□□ -0
TPM1-204ENST00000334895 TRAV10A0A0B4J240 114 aa15.04■□□□□ -0
TPM1-204ENST00000334895 A0A0J9YY99 117 aa15.04■□□□□ -0
TPM1-204ENST00000334895 OR10J3Q5JRS4 329 aa15.04■□□□□ -0
TPM1-204ENST00000334895 NIT2Q9NQR4 276 aa15.04■□□□□ -0
TPM1-204ENST00000334895 TRBV10-1A0A0K0K1A3 114 aa15.03■□□□□ -0
TPM1-204ENST00000334895 PAX4O43316 350 aa15.03■□□□□ -0
TPM1-204ENST00000334895 TRBV6-5A0A0K0K1A5 114 aa15.03■□□□□ -0
TPM1-204ENST00000334895 DNAH7Q8WXX0 4024 aa15.02■□□□□ -0
TPM1-204ENST00000334895 PHLDA1Q8WV24 401 aaPredicted RBP15.02□□□□□ -0.01
TPM1-204ENST00000334895 PRADC1Q9BSG0 188 aa15.02□□□□□ -0.01
TPM1-204ENST00000334895 LAMTOR2Q9Y2Q5 125 aa15.02□□□□□ -0.01
TPM1-204ENST00000334895 GAGE12JA6NER3 117 aa15.01□□□□□ -0.01
TPM1-204ENST00000334895 LINC00694P0DN24 101 aa15.01□□□□□ -0.01
TPM1-204ENST00000334895 GYPEP15421 78 aa15.01□□□□□ -0.01
TPM1-204ENST00000334895 GAGE1Q13065 139 aa15.01□□□□□ -0.01
TPM1-204ENST00000334895 GAGE4Q13068 117 aa15.01□□□□□ -0.01
TPM1-204ENST00000334895 GAGE5Q13069 117 aa15.01□□□□□ -0.01
TPM1-204ENST00000334895 GAGE13Q4V321 117 aa15.01□□□□□ -0.01
TPM1-204ENST00000334895 PPP1R17O96001 155 aa15□□□□□ -0.01
TPM1-204ENST00000334895 SUMO2P61956 95 aaKnown RBP15□□□□□ -0.01
TPM1-204ENST00000334895 IQCJQ1A5X6 159 aa15□□□□□ -0.01
TPM1-204ENST00000334895 ZNRF2Q8NHG8 242 aa15□□□□□ -0.01
TPM1-204ENST00000334895 C18orf32Q8TCD1 76 aa15□□□□□ -0.01
TPM1-204ENST00000334895 DNAJC30Q96LL9 226 aa15□□□□□ -0.01
TPM1-204ENST00000334895 TRBV7-3A0A075B6L6 115 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST1H2BKO60814 126 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST1H2BJP06899 126 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST1H2BOP23527 126 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST1H2BBP33778 126 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST1H2BDP58876 126 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST1H2BCP62807 126 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST2H2BEQ16778 126 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST1H2BHQ93079 126 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST1H2BNQ99877 126 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 HIST1H2BMQ99879 126 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 DYNC2H1Q8NCM8 4307 aaKnown RBP14.99□□□□□ -0.01
TPM1-204ENST00000334895 SDHAF1A6NFY7 115 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 C1orf196B1AJZ1 125 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 POLR2KP53803 58 aaKnown RBP14.99□□□□□ -0.01
TPM1-204ENST00000334895 C20orf78Q9BR46 151 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 TMEM70Q9BUB7 260 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 ST20Q9HBF5 79 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 TNFRSF18Q9Y5U5 241 aa14.99□□□□□ -0.01
TPM1-204ENST00000334895 PRSS47A8MTI9 375 aa14.98□□□□□ -0.01
TPM1-204ENST00000334895 UBE2D3P61077 147 aa14.98□□□□□ -0.01
TPM1-204ENST00000334895 UBE2D2P62837 147 aa14.98□□□□□ -0.01
TPM1-204ENST00000334895 RPL36AP83881 106 aaKnown RBP14.98□□□□□ -0.01
TPM1-204ENST00000334895 NEGR1Q7Z3B1 354 aa14.98□□□□□ -0.01
TPM1-204ENST00000334895 RPL36ALQ969Q0 106 aaKnown RBP14.98□□□□□ -0.01
TPM1-204ENST00000334895 LOC389332A0A1B0GUA5 103 aa14.97□□□□□ -0.01
TPM1-204ENST00000334895 IGLV2-18A0A075B6J9 118 aa14.96□□□□□ -0.01
TPM1-204ENST00000334895 H3BNG1 76 aa14.96□□□□□ -0.01
TPM1-204ENST00000334895 SMIM2Q9BVW6 85 aa14.96□□□□□ -0.01
TPM1-204ENST00000334895 MAP1LC3AQ9H492 121 aa14.96□□□□□ -0.01
TPM1-204ENST00000334895 CSMD3Q7Z407 3707 aa14.95□□□□□ -0.02
TPM1-204ENST00000334895 A0A096LPF7 62 aa14.95□□□□□ -0.02
TPM1-204ENST00000334895 IGHV3-38A0A0C4DH36 116 aa14.95□□□□□ -0.02
TPM1-204ENST00000334895 RPL32P62910 135 aaKnown RBP14.95□□□□□ -0.02
TPM1-204ENST00000334895 MUC7Q8TAX7 377 aa14.95□□□□□ -0.02
TPM1-204ENST00000334895 URB1-AS1Q96HZ7 61 aa14.95□□□□□ -0.02
TPM1-204ENST00000334895 TRBV27A0A0K0K1C4 114 aa14.94□□□□□ -0.02
TPM1-204ENST00000334895 IFI27P40305 119 aaPredicted RBP14.94□□□□□ -0.02
TPM1-204ENST00000334895 DEFB104AQ8WTQ1 72 aa14.94□□□□□ -0.02
TPM1-204ENST00000334895 Q0VG73 95 aa14.93□□□□□ -0.02
TPM1-204ENST00000334895 ICOSQ9Y6W8 199 aa14.93□□□□□ -0.02
TPM1-204ENST00000334895 RAB5BP61020 215 aa14.92□□□□□ -0.02
TPM1-204ENST00000334895 MRPL23Q16540 153 aaKnown RBP14.92□□□□□ -0.02
TPM1-204ENST00000334895 CEMP1Q6PRD7 247 aaPredicted RBP14.92□□□□□ -0.02
TPM1-204ENST00000334895 VCYO14598 125 aa14.92□□□□□ -0.02
TPM1-204ENST00000334895 Q8N8P6 123 aa14.92□□□□□ -0.02
TPM1-204ENST00000334895 STARD9Q9P2P6 4700 aa14.91□□□□□ -0.02
TPM1-204ENST00000334895 IGLL5B9A064 214 aa14.91□□□□□ -0.02
TPM1-204ENST00000334895 LINC00310P59036 64 aa14.91□□□□□ -0.02
TPM1-204ENST00000334895 DAZ4Q86SG3 579 aaKnown RBP14.91□□□□□ -0.02
TPM1-204ENST00000334895 DAZ3Q9NR90 486 aaKnown RBP14.91□□□□□ -0.02
TPM1-204ENST00000334895 I3L3M4 83 aa14.9□□□□□ -0.02
TPM1-204ENST00000334895 NUDT3O95989 172 aa14.9□□□□□ -0.02
TPM1-204ENST00000334895 TSHBP01222 138 aa14.9□□□□□ -0.02
TPM1-204ENST00000334895 PMCHP20382 165 aa14.9□□□□□ -0.02
TPM1-204ENST00000334895 ATP6V0E2Q8NHE4 81 aa14.9□□□□□ -0.02
TPM1-204ENST00000334895 PRSS3P2Q8NHM4 247 aa14.9□□□□□ -0.02
TPM1-204ENST00000334895 ZFAND6Q6FIF0 208 aa14.89□□□□□ -0.03
TPM1-204ENST00000334895 NIT1Q86X76 327 aa14.89□□□□□ -0.03
TPM1-204ENST00000334895 NXT2Q9NPJ8 142 aaKnown RBP14.89□□□□□ -0.03
TPM1-204ENST00000334895 PLECQ15149 4684 aaKnown RBP14.88□□□□□ -0.03
TPM1-204ENST00000334895 NUPR2A6NF83 97 aa14.88□□□□□ -0.03
TPM1-204ENST00000334895 TCAPO15273 167 aa14.88□□□□□ -0.03
TPM1-204ENST00000334895 BAGE3Q86Y29 109 aa14.88□□□□□ -0.03
TPM1-204ENST00000334895 LINC01546A6NGU7 62 aa14.88□□□□□ -0.03
TPM1-204ENST00000334895 NTM-AS1Q6ZSK4 140 aa14.88□□□□□ -0.03
TPM1-204ENST00000334895 SH2D6Q7Z4S9 175 aa14.88□□□□□ -0.03
TPM1-204ENST00000334895 C15orf53Q8NAA6 179 aa14.87□□□□□ -0.03
TPM1-204ENST00000334895 NUPR1O60356 82 aa14.86□□□□□ -0.03
TPM1-204ENST00000334895 SERF1AO75920 110 aa14.86□□□□□ -0.03
TPM1-204ENST00000334895 LINC00614P0C842 121 aa14.86□□□□□ -0.03
TPM1-204ENST00000334895 KIR2DL4Q99706 377 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms