RNA–Protein interactions for RNA: ENST00000330452.7

PRKCD-201, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-201ENST00000330452 FAM19A4Q96LR4 140 aa12.98□□□□□ -0.33
PRKCD-201ENST00000330452 ZNF256Q9Y2P7 627 aaPredicted RBP12.98□□□□□ -0.33
PRKCD-201ENST00000330452 TMEM258P61165 79 aa12.98□□□□□ -0.33
PRKCD-201ENST00000330452 PRR25Q96S07 402 aa12.98□□□□□ -0.33
PRKCD-201ENST00000330452 PYGO1Q9Y3Y4 419 aa12.98□□□□□ -0.33
PRKCD-201ENST00000330452 ANKRD17O75179 2603 aaKnown RBP12.98□□□□□ -0.33
PRKCD-201ENST00000330452 IGHV3-30P01768 117 aa12.97□□□□□ -0.33
PRKCD-201ENST00000330452 IGHV3-30-5P0DP03 117 aa12.97□□□□□ -0.33
PRKCD-201ENST00000330452 Q8N9W7 124 aa12.97□□□□□ -0.33
PRKCD-201ENST00000330452 IGHV4-39P01824 125 aa12.97□□□□□ -0.33
PRKCD-201ENST00000330452 TMEM190Q8WZ59 177 aa12.97□□□□□ -0.33
PRKCD-201ENST00000330452 IGLV2-18A0A075B6J9 118 aa12.96□□□□□ -0.33
PRKCD-201ENST00000330452 A0A0J9YY99 117 aa12.96□□□□□ -0.33
PRKCD-201ENST00000330452 RS1O15537 224 aa12.96□□□□□ -0.33
PRKCD-201ENST00000330452 IGHV3-33P01772 117 aa12.96□□□□□ -0.33
PRKCD-201ENST00000330452 ECSCRQ19T08 205 aa12.96□□□□□ -0.33
PRKCD-201ENST00000330452 GATA1P15976 413 aaPredicted RBP12.96□□□□□ -0.33
PRKCD-201ENST00000330452 C2orf82Q6UX34 121 aa12.96□□□□□ -0.33
PRKCD-201ENST00000330452 KLHL30-AS1Q8NEE0 82 aa12.96□□□□□ -0.33
PRKCD-201ENST00000330452 CCDC168Q8NDH2 2452 aa12.96□□□□□ -0.34
PRKCD-201ENST00000330452 IGHV3OR16-10A0A075B7F0 116 aa12.96□□□□□ -0.34
PRKCD-201ENST00000330452 SIRPDQ9H106 197 aa12.96□□□□□ -0.34
PRKCD-201ENST00000330452 PKIGQ9Y2B9 76 aa12.96□□□□□ -0.34
PRKCD-201ENST00000330452 TRAV12-1A0A0B4J245 112 aa12.95□□□□□ -0.34
PRKCD-201ENST00000330452 MINOS1Q5TGZ0 78 aa12.95□□□□□ -0.34
PRKCD-201ENST00000330452 MINOS1-NBL1R4GNA1 71 aa12.95□□□□□ -0.34
PRKCD-201ENST00000330452 TRAV41A0A0B4J266 112 aa12.95□□□□□ -0.34
PRKCD-201ENST00000330452 IGHV3-66A0A0C4DH42 116 aa12.95□□□□□ -0.34
PRKCD-201ENST00000330452 HERVK_113P61574 105 aa12.95□□□□□ -0.34
PRKCD-201ENST00000330452 C15orf32Q32M92 178 aa12.95□□□□□ -0.34
PRKCD-201ENST00000330452 DEFB121Q5J5C9 76 aa12.95□□□□□ -0.34
PRKCD-201ENST00000330452 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
PRKCD-201ENST00000330452 LINC00336Q6ZUF6 198 aa12.95□□□□□ -0.34
PRKCD-201ENST00000330452 H7C2G1 150 aa12.94□□□□□ -0.34
PRKCD-201ENST00000330452 EIF4EBP3O60516 100 aaPredicted RBP12.94□□□□□ -0.34
PRKCD-201ENST00000330452 ERCC8Q13216 396 aa12.94□□□□□ -0.34
PRKCD-201ENST00000330452 Q6ZS46 218 aa12.94□□□□□ -0.34
PRKCD-201ENST00000330452 BPESC1Q9GZL8 116 aa12.94□□□□□ -0.34
PRKCD-201ENST00000330452 IGHV3OR16-13A0A075B7E8 117 aa12.94□□□□□ -0.34
PRKCD-201ENST00000330452 IGHV3-74A0A0B4J1X5 117 aa12.94□□□□□ -0.34
PRKCD-201ENST00000330452 NAV2Q8IVL1 2488 aa12.93□□□□□ -0.34
PRKCD-201ENST00000330452 PRAC2D3DTV9 90 aa12.93□□□□□ -0.34
PRKCD-201ENST00000330452 ZNF575Q86XF7 245 aa12.93□□□□□ -0.34
PRKCD-201ENST00000330452 METTL26Q96S19 204 aa12.93□□□□□ -0.34
PRKCD-201ENST00000330452 MSRB1Q9NZV6 116 aa12.93□□□□□ -0.34
PRKCD-201ENST00000330452 ATP6V0E1O15342 81 aa12.93□□□□□ -0.34
PRKCD-201ENST00000330452 RNF182Q8N6D2 247 aa12.93□□□□□ -0.34
PRKCD-201ENST00000330452 RNF152Q8N8N0 203 aa12.93□□□□□ -0.34
PRKCD-201ENST00000330452 G3V318 75 aa12.92□□□□□ -0.34
PRKCD-201ENST00000330452 BBC3Q96PG8 261 aaPredicted RBP12.92□□□□□ -0.34
PRKCD-201ENST00000330452 LAGE3Q14657 143 aa12.92□□□□□ -0.34
PRKCD-201ENST00000330452 COX8CQ7Z4L0 72 aa12.91□□□□□ -0.34
PRKCD-201ENST00000330452 IGHV3-49A0A0A0MS15 119 aa12.91□□□□□ -0.34
PRKCD-201ENST00000330452 H7C423 109 aa12.91□□□□□ -0.34
PRKCD-201ENST00000330452 SAA4P35542 130 aa12.91□□□□□ -0.34
PRKCD-201ENST00000330452 TMEM86BQ8N661 226 aa12.91□□□□□ -0.34
PRKCD-201ENST00000330452 TMEM263Q8WUH6 116 aaKnown RBP12.91□□□□□ -0.34
PRKCD-201ENST00000330452 FAM110DQ8TAY7 271 aaPredicted RBP12.9□□□□□ -0.34
PRKCD-201ENST00000330452 SMCR5Q8TEV8 140 aa12.9□□□□□ -0.34
PRKCD-201ENST00000330452 ZFAND3Q9H8U3 227 aa12.9□□□□□ -0.34
PRKCD-201ENST00000330452 CLEC19AQ6UXS0 136 aa12.9□□□□□ -0.34
PRKCD-201ENST00000330452 DOPEY2Q9Y3R5 2298 aa12.9□□□□□ -0.34
PRKCD-201ENST00000330452 SONP18583 2426 aaKnown RBP12.89□□□□□ -0.35
PRKCD-201ENST00000330452 TRAV13-1A0A0B4J241 112 aa12.89□□□□□ -0.35
PRKCD-201ENST00000330452 H3BT86 120 aa12.89□□□□□ -0.35
PRKCD-201ENST00000330452 BUB3O43684 328 aa12.89□□□□□ -0.35
PRKCD-201ENST00000330452 UBE2E1P51965 193 aa12.89□□□□□ -0.35
PRKCD-201ENST00000330452 V9GYY9 64 aa12.89□□□□□ -0.35
PRKCD-201ENST00000330452 SLC25A29Q8N8R3 303 aa12.88□□□□□ -0.35
PRKCD-201ENST00000330452 ZNF469Q96JG9 3925 aaPredicted RBP12.88□□□□□ -0.35
PRKCD-201ENST00000330452 CCDC140Q96MF4 163 aa12.88□□□□□ -0.35
PRKCD-201ENST00000330452 BEX4Q9NWD9 120 aaPredicted RBP12.88□□□□□ -0.35
PRKCD-201ENST00000330452 PFN2P35080 140 aa12.88□□□□□ -0.35
PRKCD-201ENST00000330452 ZNF415Q09FC8 603 aa12.88□□□□□ -0.35
PRKCD-201ENST00000330452 LINC00643Q86TS7 51 aa12.88□□□□□ -0.35
PRKCD-201ENST00000330452 CLPSL1A2RUU4 121 aa12.87□□□□□ -0.35
PRKCD-201ENST00000330452 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.87□□□□□ -0.35
PRKCD-201ENST00000330452 IL17RELQ6ZVW7 336 aa12.87□□□□□ -0.35
PRKCD-201ENST00000330452 NEXN-AS1Q8NBZ9 246 aa12.87□□□□□ -0.35
PRKCD-201ENST00000330452 MXRA5Q9NR99 2828 aa12.87□□□□□ -0.35
PRKCD-201ENST00000330452 C5orf38Q86SI9 138 aa12.87□□□□□ -0.35
PRKCD-201ENST00000330452 TENM4Q6N022 2769 aa12.87□□□□□ -0.35
PRKCD-201ENST00000330452 J3QQQ9 107 aa12.86□□□□□ -0.35
PRKCD-201ENST00000330452 Q1RN00 199 aa12.86□□□□□ -0.35
PRKCD-201ENST00000330452 PSMG3-AS1Q96PY0 264 aa12.86□□□□□ -0.35
PRKCD-201ENST00000330452 UBR5O95071 2799 aaPredicted RBP12.86□□□□□ -0.35
PRKCD-201ENST00000330452 TEX15Q9BXT5 2789 aa12.86□□□□□ -0.35
PRKCD-201ENST00000330452 ATOX1O00244 68 aa12.85□□□□□ -0.35
PRKCD-201ENST00000330452 ACYP1P07311 99 aa12.85□□□□□ -0.35
PRKCD-201ENST00000330452 LMO4P61968 165 aa12.85□□□□□ -0.35
PRKCD-201ENST00000330452 HIST1H4AP62805 103 aaKnown RBP12.85□□□□□ -0.35
PRKCD-201ENST00000330452 A0A0B4J2C4 111 aa12.85□□□□□ -0.35
PRKCD-201ENST00000330452 C10orf105Q8TEF2 133 aa12.85□□□□□ -0.35
PRKCD-201ENST00000330452 SETD2Q9BYW2 2564 aaPredicted RBP12.84□□□□□ -0.35
PRKCD-201ENST00000330452 TRIAP1O43715 76 aa12.84□□□□□ -0.35
PRKCD-201ENST00000330452 CXCL5P42830 114 aa12.84□□□□□ -0.35
PRKCD-201ENST00000330452 NSUN5P1Q3KNT7 163 aa12.84□□□□□ -0.35
PRKCD-201ENST00000330452 EEF1AKMT3Q96AZ1 226 aa12.84□□□□□ -0.35
PRKCD-201ENST00000330452 AGPAT4-IT1Q9H0P7 198 aa12.84□□□□□ -0.35
PRKCD-201ENST00000330452 UPK3BQ9BT76 320 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms