RNA–Protein interactions for RNA: ENST00000316068.7

MCM9-201, Transcript of minichromosome maintenance 9 homologous recombination repair factor, humanhuman

TSL 1 (best) BASIC

Gene MCM9, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM9-201ENST00000316068 HTN1P15515 57 aa13.1□□□□□ -0.31
MCM9-201ENST00000316068 TMEM170BQ5T4T1 132 aa13.1□□□□□ -0.31
MCM9-201ENST00000316068 KNCNA6PVL3 124 aa13.1□□□□□ -0.31
MCM9-201ENST00000316068 HOXA3O43365 443 aaPredicted RBP13.1□□□□□ -0.31
MCM9-201ENST00000316068 PRB1P04280 392 aa13.1□□□□□ -0.31
MCM9-201ENST00000316068 HOXD3P31249 432 aaPredicted RBP13.1□□□□□ -0.31
MCM9-201ENST00000316068 ZNF876PQ49A33 203 aa13.09□□□□□ -0.31
MCM9-201ENST00000316068 DUX3Q96PT4 197 aa13.09□□□□□ -0.31
MCM9-201ENST00000316068 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
MCM9-201ENST00000316068 SONP18583 2426 aaKnown RBP13.09□□□□□ -0.31
MCM9-201ENST00000316068 TRBV6-5A0A0K0K1A5 114 aa13.09□□□□□ -0.31
MCM9-201ENST00000316068 UBE2D1P51668 147 aa13.09□□□□□ -0.31
MCM9-201ENST00000316068 SRSF9Q13242 221 aaKnown RBP eCLIP13.09□□□□□ -0.31
MCM9-201ENST00000316068 IGHV3-64A0A075B6Q5 118 aa13.08□□□□□ -0.32
MCM9-201ENST00000316068 APOMO95445 188 aa13.08□□□□□ -0.32
MCM9-201ENST00000316068 SNRPD3P62318 126 aaKnown RBP13.08□□□□□ -0.32
MCM9-201ENST00000316068 TIMM17AQ99595 171 aa13.08□□□□□ -0.32
MCM9-201ENST00000316068 ZNF702PQ9H963 129 aa13.08□□□□□ -0.32
MCM9-201ENST00000316068 TSPAN13O95857 204 aa13.07□□□□□ -0.32
MCM9-201ENST00000316068 SMCPP49901 116 aaPredicted RBP13.07□□□□□ -0.32
MCM9-201ENST00000316068 SLURP1P55000 103 aa13.07□□□□□ -0.32
MCM9-201ENST00000316068 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
MCM9-201ENST00000316068 UBR5O95071 2799 aaPredicted RBP13.07□□□□□ -0.32
MCM9-201ENST00000316068 RBMY1BA6NDE4 496 aaKnown RBP13.07□□□□□ -0.32
MCM9-201ENST00000316068 RBMY1EA6NEQ0 496 aaKnown RBP13.07□□□□□ -0.32
MCM9-201ENST00000316068 RBMY1DP0C7P1 496 aaKnown RBP13.07□□□□□ -0.32
MCM9-201ENST00000316068 FAM104AQ969W3 186 aa13.07□□□□□ -0.32
MCM9-201ENST00000316068 MRPL16Q9NX20 251 aaKnown RBP13.07□□□□□ -0.32
MCM9-201ENST00000316068 EIF4EBP3O60516 100 aaPredicted RBP13.06□□□□□ -0.32
MCM9-201ENST00000316068 KRTAP10-9P60411 292 aa13.06□□□□□ -0.32
MCM9-201ENST00000316068 ODF3Q96PU9 254 aa13.06□□□□□ -0.32
MCM9-201ENST00000316068 SPAG8Q99932 426 aaPredicted RBP13.06□□□□□ -0.32
MCM9-201ENST00000316068 F8W1H4 67 aa13.05□□□□□ -0.32
MCM9-201ENST00000316068 CEMP1Q6PRD7 247 aaPredicted RBP13.05□□□□□ -0.32
MCM9-201ENST00000316068 TMEM141Q96I45 108 aa13.05□□□□□ -0.32
MCM9-201ENST00000316068 NACAE9PAV3 2078 aa13.05□□□□□ -0.32
MCM9-201ENST00000316068 SETD2Q9BYW2 2564 aaPredicted RBP13.05□□□□□ -0.32
MCM9-201ENST00000316068 APCP25054 2843 aa13.05□□□□□ -0.32
MCM9-201ENST00000316068 GAGE13Q4V321 117 aa13.04□□□□□ -0.32
MCM9-201ENST00000316068 TCTEX1D4Q5JR98 221 aa13.04□□□□□ -0.32
MCM9-201ENST00000316068 IGHV3-30P01768 117 aa13.04□□□□□ -0.32
MCM9-201ENST00000316068 IGHV3-30-5P0DP03 117 aa13.04□□□□□ -0.32
MCM9-201ENST00000316068 TSSC4Q9Y5U2 329 aaPredicted RBP13.04□□□□□ -0.32
MCM9-201ENST00000316068 CFC1BP0CG36 223 aa13.03□□□□□ -0.32
MCM9-201ENST00000316068 CFC1P0CG37 223 aa13.03□□□□□ -0.32
MCM9-201ENST00000316068 RNASE13Q5GAN3 156 aaKnown RBP13.03□□□□□ -0.32
MCM9-201ENST00000316068 Q6ZSN1 163 aa13.03□□□□□ -0.32
MCM9-201ENST00000316068 VPREB3Q9UKI3 123 aa13.03□□□□□ -0.32
MCM9-201ENST00000316068 CR1P17927 2039 aa13.03□□□□□ -0.32
MCM9-201ENST00000316068 A0A0J9YXV3 536 aa13.03□□□□□ -0.32
MCM9-201ENST00000316068 GATA3P23771 443 aa13.03□□□□□ -0.32
MCM9-201ENST00000316068 C20orf203Q8NBC4 194 aa13.03□□□□□ -0.32
MCM9-201ENST00000316068 J3QQQ9 107 aa13.02□□□□□ -0.32
MCM9-201ENST00000316068 DEFB131AP59861 70 aa13.02□□□□□ -0.32
MCM9-201ENST00000316068 NSUN5P1Q3KNT7 163 aa13.02□□□□□ -0.32
MCM9-201ENST00000316068 NDUFA11Q86Y39 141 aa13.02□□□□□ -0.32
MCM9-201ENST00000316068 SYT8Q8NBV8 401 aa13.02□□□□□ -0.32
MCM9-201ENST00000316068 GTSF1LQ9H1H1 148 aa13.02□□□□□ -0.32
MCM9-201ENST00000316068 PRRC2AP48634 2157 aaKnown RBP13.02□□□□□ -0.33
MCM9-201ENST00000316068 IGLV4-3A0A075B6K6 122 aa13.01□□□□□ -0.33
MCM9-201ENST00000316068 LOC107984156A0A0G2JMH3 177 aa13.01□□□□□ -0.33
MCM9-201ENST00000316068 TRPT1Q86TN4 253 aaKnown RBP13.01□□□□□ -0.33
MCM9-201ENST00000316068 ARL17AQ8IVW1 177 aa13.01□□□□□ -0.33
MCM9-201ENST00000316068 SLC25A29Q8N8R3 303 aa13.01□□□□□ -0.33
MCM9-201ENST00000316068 PTH2Q96A98 100 aa13.01□□□□□ -0.33
MCM9-201ENST00000316068 ZNF22P17026 224 aaPredicted RBP13.01□□□□□ -0.33
MCM9-201ENST00000316068 SAMD13Q5VXD3 122 aa13.01□□□□□ -0.33
MCM9-201ENST00000316068 WNK1Q9H4A3 2382 aa13.01□□□□□ -0.33
MCM9-201ENST00000316068 TMEM223A0PJW6 202 aa13□□□□□ -0.33
MCM9-201ENST00000316068 HERVK_113P61574 105 aa13□□□□□ -0.33
MCM9-201ENST00000316068 Q6YL49 198 aa13□□□□□ -0.33
MCM9-201ENST00000316068 NFE4Q86UQ8 179 aa13□□□□□ -0.33
MCM9-201ENST00000316068 ADARB2-AS1A8MUL3 147 aa13□□□□□ -0.33
MCM9-201ENST00000316068 FSHBP01225 129 aa13□□□□□ -0.33
MCM9-201ENST00000316068 UBE2E2Q96LR5 201 aa13□□□□□ -0.33
MCM9-201ENST00000316068 TMEM238C9JI98 176 aa12.99□□□□□ -0.33
MCM9-201ENST00000316068 PSMB2P49721 201 aa12.99□□□□□ -0.33
MCM9-201ENST00000316068 UBE2D3P61077 147 aa12.99□□□□□ -0.33
MCM9-201ENST00000316068 UBE2D2P62837 147 aa12.99□□□□□ -0.33
MCM9-201ENST00000316068 PAPPA-AS1Q5QFB9 102 aa12.99□□□□□ -0.33
MCM9-201ENST00000316068 CFAP126Q5VTH2 177 aa12.99□□□□□ -0.33
MCM9-201ENST00000316068 TMEM89A2RUT3 159 aa12.99□□□□□ -0.33
MCM9-201ENST00000316068 I3L3M4 83 aa12.99□□□□□ -0.33
MCM9-201ENST00000316068 IGHV4-31P0DP07 118 aa12.99□□□□□ -0.33
MCM9-201ENST00000316068 NOTCH3Q9UM47 2321 aa12.99□□□□□ -0.33
MCM9-201ENST00000316068 TMEM61Q8N0U2 210 aa12.98□□□□□ -0.33
MCM9-201ENST00000316068 C10orf126Q8N4M7 172 aa12.98□□□□□ -0.33
MCM9-201ENST00000316068 BBC3Q96PG8 261 aaPredicted RBP12.98□□□□□ -0.33
MCM9-201ENST00000316068 ELANEP08246 267 aa12.98□□□□□ -0.33
MCM9-201ENST00000316068 RHOHQ15669 191 aa12.98□□□□□ -0.33
MCM9-201ENST00000316068 H3BMM0 161 aa12.97□□□□□ -0.33
MCM9-201ENST00000316068 RHODO00212 210 aa12.97□□□□□ -0.33
MCM9-201ENST00000316068 TCL1BO95988 128 aa12.97□□□□□ -0.33
MCM9-201ENST00000316068 CCDC168Q8NDH2 2452 aa12.97□□□□□ -0.33
MCM9-201ENST00000316068 ITPR3Q14573 2671 aa12.97□□□□□ -0.33
MCM9-201ENST00000316068 TMEM238LA0A1B0GVL6 79 aa12.97□□□□□ -0.33
MCM9-201ENST00000316068 A6NJY4 79 aa12.97□□□□□ -0.33
MCM9-201ENST00000316068 A8MZ25 164 aa12.97□□□□□ -0.33
MCM9-201ENST00000316068 AZU1P20160 251 aa12.97□□□□□ -0.33
MCM9-201ENST00000316068 DSCR9P59020 149 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms