RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 AP1S3Q96PC3 154 aa9.67□□□□□ -0.86
PPP1CA-201ENST00000312989 TRBV6-8A0A0A6YYG3 113 aa9.66□□□□□ -0.86
PPP1CA-201ENST00000312989 TMEM250H0YL14 139 aa9.66□□□□□ -0.86
PPP1CA-201ENST00000312989 P01737 135 aa9.66□□□□□ -0.86
PPP1CA-201ENST00000312989 BLOC1S1P78537 153 aa9.66□□□□□ -0.86
PPP1CA-201ENST00000312989 RNASE7Q9H1E1 156 aaKnown RBP9.66□□□□□ -0.86
PPP1CA-201ENST00000312989 EREGO14944 169 aa9.65□□□□□ -0.86
PPP1CA-201ENST00000312989 ATRAIDQ6UW56 229 aa9.65□□□□□ -0.86
PPP1CA-201ENST00000312989 LYZL1Q6UWQ5 148 aa9.65□□□□□ -0.86
PPP1CA-201ENST00000312989 GTSF1Q8WW33 167 aa9.65□□□□□ -0.86
PPP1CA-201ENST00000312989 DAZAP1Q96EP5 407 aaKnown RBP9.65□□□□□ -0.86
PPP1CA-201ENST00000312989 CHCHD7Q9BUK0 85 aa9.65□□□□□ -0.86
PPP1CA-201ENST00000312989 TPPP3Q9BW30 176 aa9.65□□□□□ -0.86
PPP1CA-201ENST00000312989 CACNG7P62955 275 aa9.64□□□□□ -0.87
PPP1CA-201ENST00000312989 SUMO4Q6EEV6 95 aa9.64□□□□□ -0.87
PPP1CA-201ENST00000312989 TRAV8-3A0A0A6YYJ7 113 aa9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 F2Z2F3 143 aa9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 PSCAO43653 123 aa9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 MPV17L2Q567V2 206 aa9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 RPP21Q9H633 154 aaKnown RBP9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 KLK12Q9UKR0 248 aa9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 NDUFS6O75380 124 aaKnown RBP9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 NTF3P20783 257 aa9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 TOR2AQ5JU69 321 aa9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 WDR73Q6P4I2 378 aa9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 ENHOQ6UWT2 76 aa9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 NTN5Q8WTR8 489 aaPredicted RBP9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 BIN3Q9NQY0 253 aa9.63□□□□□ -0.87
PPP1CA-201ENST00000312989 F5H697 171 aa9.62□□□□□ -0.87
PPP1CA-201ENST00000312989 GCSHP23434 173 aa9.62□□□□□ -0.87
PPP1CA-201ENST00000312989 FAM231DQ6ZW35 169 aa9.62□□□□□ -0.87
PPP1CA-201ENST00000312989 FAM210AQ96ND0 272 aa9.62□□□□□ -0.87
PPP1CA-201ENST00000312989 TM2D2Q9BX73 214 aa9.62□□□□□ -0.87
PPP1CA-201ENST00000312989 XKRY2A2RUG3 117 aa9.61□□□□□ -0.87
PPP1CA-201ENST00000312989 SMIM17P0DL12 118 aa9.61□□□□□ -0.87
PPP1CA-201ENST00000312989 IGLV5-52A0A0A0MRZ9 124 aa9.6□□□□□ -0.87
PPP1CA-201ENST00000312989 LECT2O14960 151 aa9.6□□□□□ -0.87
PPP1CA-201ENST00000312989 MGPP08493 103 aa9.6□□□□□ -0.87
PPP1CA-201ENST00000312989 SRP19P09132 144 aaKnown RBP9.6□□□□□ -0.87
PPP1CA-201ENST00000312989 IQCJQ1A5X6 159 aa9.6□□□□□ -0.87
PPP1CA-201ENST00000312989 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
PPP1CA-201ENST00000312989 Q8N976 141 aa9.6□□□□□ -0.87
PPP1CA-201ENST00000312989 BAALCQ8WXS3 180 aa9.6□□□□□ -0.87
PPP1CA-201ENST00000312989 DPH3P1Q9H4G8 78 aa9.6□□□□□ -0.87
PPP1CA-201ENST00000312989 FAM30AQ9NZY2 134 aa9.6□□□□□ -0.87
PPP1CA-201ENST00000312989 A0A087WX48 190 aa9.59□□□□□ -0.87
PPP1CA-201ENST00000312989 C9JQL5 133 aa9.59□□□□□ -0.87
PPP1CA-201ENST00000312989 FOXA3P55318 350 aaPredicted RBP9.59□□□□□ -0.87
PPP1CA-201ENST00000312989 LINC01551Q86U37 167 aa9.59□□□□□ -0.87
PPP1CA-201ENST00000312989 UBE2WQ96B02 151 aa9.59□□□□□ -0.87
PPP1CA-201ENST00000312989 PRR34Q9NV39 138 aa9.59□□□□□ -0.87
PPP1CA-201ENST00000312989 URGCP-MRPS24S4R325 110 aa9.59□□□□□ -0.87
PPP1CA-201ENST00000312989 MYCBP2O75592 4640 aa9.58□□□□□ -0.88
PPP1CA-201ENST00000312989 TRGC1P0CF51 173 aa9.58□□□□□ -0.88
PPP1CA-201ENST00000312989 HAMPP81172 84 aa9.58□□□□□ -0.88
PPP1CA-201ENST00000312989 CT83Q5H943 113 aa9.58□□□□□ -0.88
PPP1CA-201ENST00000312989 RASL11AQ6T310 242 aa9.58□□□□□ -0.88
PPP1CA-201ENST00000312989 Q6ZSA8 131 aa9.58□□□□□ -0.88
PPP1CA-201ENST00000312989 IGKV2D-24A0A075B6R9 120 aa9.57□□□□□ -0.88
PPP1CA-201ENST00000312989 RBX1P62877 108 aa9.57□□□□□ -0.88
PPP1CA-201ENST00000312989 TMEM97Q5BJF2 176 aa9.57□□□□□ -0.88
PPP1CA-201ENST00000312989 C15orf54Q8N8G6 183 aa9.57□□□□□ -0.88
PPP1CA-201ENST00000312989 GATD1Q8NB37 220 aa9.57□□□□□ -0.88
PPP1CA-201ENST00000312989 CHCHD5Q9BSY4 110 aa9.57□□□□□ -0.88
PPP1CA-201ENST00000312989 TRAV26-2A0A0B4J265 109 aa9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 H7C1H1 209 aa9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 SRSF3P84103 164 aaKnown RBP9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 ELOBQ15370 118 aa9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 TWIST1Q15672 202 aa9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 PGLYRP4Q96LB8 373 aa9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 SMIM7Q9BQ49 75 aa9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 TMEM70Q9BUB7 260 aa9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 NIT2Q9NQR4 276 aa9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 COX11Q9Y6N1 276 aa9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 HERC1Q15751 4861 aa9.56□□□□□ -0.88
PPP1CA-201ENST00000312989 TMEM262E9PQX1 116 aa9.55□□□□□ -0.88
PPP1CA-201ENST00000312989 GATCO43716 136 aaKnown RBP9.55□□□□□ -0.88
PPP1CA-201ENST00000312989 CEBPGP53567 150 aa9.55□□□□□ -0.88
PPP1CA-201ENST00000312989 GAGE6Q13070 117 aa9.55□□□□□ -0.88
PPP1CA-201ENST00000312989 C20orf203Q8NBC4 194 aa9.55□□□□□ -0.88
PPP1CA-201ENST00000312989 EIF5A2Q9GZV4 153 aaKnown RBP9.55□□□□□ -0.88
PPP1CA-201ENST00000312989 GFRA4Q9GZZ7 299 aa9.55□□□□□ -0.88
PPP1CA-201ENST00000312989 TRBV25-1A0A075B6N4 114 aa9.54□□□□□ -0.88
PPP1CA-201ENST00000312989 IGHV1-24A0A0C4DH33 117 aa9.54□□□□□ -0.88
PPP1CA-201ENST00000312989 GAS8-AS1O95177 125 aa9.54□□□□□ -0.88
PPP1CA-201ENST00000312989 Q0VG73 95 aa9.54□□□□□ -0.88
PPP1CA-201ENST00000312989 DEFB104AQ8WTQ1 72 aa9.54□□□□□ -0.88
PPP1CA-201ENST00000312989 RMI2Q96E14 147 aa9.54□□□□□ -0.88
PPP1CA-201ENST00000312989 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.53□□□□□ -0.88
PPP1CA-201ENST00000312989 A8MWL6 223 aa9.53□□□□□ -0.88
PPP1CA-201ENST00000312989 ANGP03950 147 aaKnown RBP9.53□□□□□ -0.88
PPP1CA-201ENST00000312989 TEX261Q6UWH6 196 aa9.53□□□□□ -0.88
PPP1CA-201ENST00000312989 FRZBQ92765 325 aa9.53□□□□□ -0.88
PPP1CA-201ENST00000312989 RPL39LQ96EH5 51 aaKnown RBP9.53□□□□□ -0.88
PPP1CA-201ENST00000312989 V9GYV3 84 aa9.53□□□□□ -0.88
PPP1CA-201ENST00000312989 IGLV4-60A0A075B6I1 120 aa9.52□□□□□ -0.88
PPP1CA-201ENST00000312989 ZNF727A8MUV8 499 aa9.52□□□□□ -0.88
PPP1CA-201ENST00000312989 PKIAP61925 76 aa9.52□□□□□ -0.88
PPP1CA-201ENST00000312989 LINC01620Q4KN68 170 aa9.52□□□□□ -0.88
PPP1CA-201ENST00000312989 TSKUQ8WUA8 353 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms