RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 OR2D3Q8NGH3 330 aa13.12□□□□□ -0.31
PDZRN3-202ENST00000308537 FAM210AQ96ND0 272 aa13.12□□□□□ -0.31
PDZRN3-202ENST00000308537 GCSHP23434 173 aa13.11□□□□□ -0.31
PDZRN3-202ENST00000308537 ZNF56Q15929 161 aa13.11□□□□□ -0.31
PDZRN3-202ENST00000308537 NTN5Q8WTR8 489 aaPredicted RBP13.11□□□□□ -0.31
PDZRN3-202ENST00000308537 TRAV8-3A0A0A6YYJ7 113 aa13.1□□□□□ -0.31
PDZRN3-202ENST00000308537 CEBPGP53567 150 aa13.1□□□□□ -0.31
PDZRN3-202ENST00000308537 TRBV6-8A0A0A6YYG3 113 aa13.09□□□□□ -0.31
PDZRN3-202ENST00000308537 SSTP61278 116 aa13.09□□□□□ -0.31
PDZRN3-202ENST00000308537 NTM-AS1Q6ZSK4 140 aa13.09□□□□□ -0.31
PDZRN3-202ENST00000308537 FER1L6-AS1Q8NA97 138 aa13.09□□□□□ -0.31
PDZRN3-202ENST00000308537 CHCHD7Q9BUK0 85 aa13.09□□□□□ -0.31
PDZRN3-202ENST00000308537 TM2D2Q9BX73 214 aa13.09□□□□□ -0.31
PDZRN3-202ENST00000308537 IGLV5-52A0A0A0MRZ9 124 aa13.08□□□□□ -0.32
PDZRN3-202ENST00000308537 F2Z2F3 143 aa13.08□□□□□ -0.32
PDZRN3-202ENST00000308537 SMIM17P0DL12 118 aa13.08□□□□□ -0.32
PDZRN3-202ENST00000308537 ATRAIDQ6UW56 229 aa13.08□□□□□ -0.32
PDZRN3-202ENST00000308537 AP1S3Q96PC3 154 aa13.08□□□□□ -0.32
PDZRN3-202ENST00000308537 KLK12Q9UKR0 248 aa13.08□□□□□ -0.32
PDZRN3-202ENST00000308537 K7EN84 100 aa13.07□□□□□ -0.32
PDZRN3-202ENST00000308537 CACNG7P62955 275 aa13.07□□□□□ -0.32
PDZRN3-202ENST00000308537 OCC1Q8TAD7 63 aa13.07□□□□□ -0.32
PDZRN3-202ENST00000308537 TPPP3Q9BW30 176 aa13.07□□□□□ -0.32
PDZRN3-202ENST00000308537 M0QY20 66 aa13.06□□□□□ -0.32
PDZRN3-202ENST00000308537 NUDT10Q8NFP7 164 aa13.06□□□□□ -0.32
PDZRN3-202ENST00000308537 NUDT11Q96G61 164 aa13.06□□□□□ -0.32
PDZRN3-202ENST00000308537 SMIM7Q9BQ49 75 aa13.06□□□□□ -0.32
PDZRN3-202ENST00000308537 FAM30AQ9NZY2 134 aa13.06□□□□□ -0.32
PDZRN3-202ENST00000308537 ZNF727A8MUV8 499 aa13.05□□□□□ -0.32
PDZRN3-202ENST00000308537 LECT2O14960 151 aa13.05□□□□□ -0.32
PDZRN3-202ENST00000308537 PEA15Q15121 130 aa13.05□□□□□ -0.32
PDZRN3-202ENST00000308537 MPV17L2Q567V2 206 aa13.05□□□□□ -0.32
PDZRN3-202ENST00000308537 CNFNQ9BYD5 112 aa13.05□□□□□ -0.32
PDZRN3-202ENST00000308537 SMDT1Q9H4I9 107 aa13.05□□□□□ -0.32
PDZRN3-202ENST00000308537 RPP21Q9H633 154 aaKnown RBP13.05□□□□□ -0.32
PDZRN3-202ENST00000308537 F5H697 171 aa13.04□□□□□ -0.32
PDZRN3-202ENST00000308537 CTRLP40313 264 aa13.04□□□□□ -0.32
PDZRN3-202ENST00000308537 HAMPP81172 84 aa13.04□□□□□ -0.32
PDZRN3-202ENST00000308537 SUMO4Q6EEV6 95 aa13.04□□□□□ -0.32
PDZRN3-202ENST00000308537 LYZL1Q6UWQ5 148 aa13.04□□□□□ -0.32
PDZRN3-202ENST00000308537 ENHOQ6UWT2 76 aa13.04□□□□□ -0.32
PDZRN3-202ENST00000308537 BAALCQ8WXS3 180 aa13.04□□□□□ -0.32
PDZRN3-202ENST00000308537 A0A087WX48 190 aa13.03□□□□□ -0.32
PDZRN3-202ENST00000308537 SRP19P09132 144 aaKnown RBP13.03□□□□□ -0.32
PDZRN3-202ENST00000308537 RAB14P61106 215 aa13.03□□□□□ -0.32
PDZRN3-202ENST00000308537 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
PDZRN3-202ENST00000308537 UBE2WQ96B02 151 aa13.03□□□□□ -0.32
PDZRN3-202ENST00000308537 TMEM70Q9BUB7 260 aa13.03□□□□□ -0.32
PDZRN3-202ENST00000308537 URGCP-MRPS24S4R325 110 aa13.03□□□□□ -0.32
PDZRN3-202ENST00000308537 GATCO43716 136 aaKnown RBP13.02□□□□□ -0.33
PDZRN3-202ENST00000308537 Q6ZSA8 131 aa13.02□□□□□ -0.33
PDZRN3-202ENST00000308537 FAM231DQ6ZW35 169 aa13.02□□□□□ -0.33
PDZRN3-202ENST00000308537 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.02□□□□□ -0.33
PDZRN3-202ENST00000308537 RNASE7Q9H1E1 156 aaKnown RBP13.02□□□□□ -0.33
PDZRN3-202ENST00000308537 MYCBP2O75592 4640 aa13.02□□□□□ -0.33
PDZRN3-202ENST00000308537 SRRM2Q9UQ35 2752 aaKnown RBP13.01□□□□□ -0.33
PDZRN3-202ENST00000308537 EPM2AB3EWF7 344 aa13.01□□□□□ -0.33
PDZRN3-202ENST00000308537 TRGC1P0CF51 173 aa13.01□□□□□ -0.33
PDZRN3-202ENST00000308537 WDR73Q6P4I2 378 aa13.01□□□□□ -0.33
PDZRN3-202ENST00000308537 Q8N976 141 aa13.01□□□□□ -0.33
PDZRN3-202ENST00000308537 COX11Q9Y6N1 276 aa13.01□□□□□ -0.33
PDZRN3-202ENST00000308537 FLG2Q5D862 2391 aaPredicted RBP13.01□□□□□ -0.33
PDZRN3-202ENST00000308537 IGKV2D-24A0A075B6R9 120 aa13□□□□□ -0.33
PDZRN3-202ENST00000308537 A8MWL6 223 aa13□□□□□ -0.33
PDZRN3-202ENST00000308537 NTF3P20783 257 aa13□□□□□ -0.33
PDZRN3-202ENST00000308537 GTSF1Q8WW33 167 aa13□□□□□ -0.33
PDZRN3-202ENST00000308537 MGPP08493 103 aa12.99□□□□□ -0.33
PDZRN3-202ENST00000308537 ELOBQ15370 118 aa12.99□□□□□ -0.33
PDZRN3-202ENST00000308537 IQCJQ1A5X6 159 aa12.99□□□□□ -0.33
PDZRN3-202ENST00000308537 Q5VSD8 79 aa12.99□□□□□ -0.33
PDZRN3-202ENST00000308537 RMI2Q96E14 147 aa12.99□□□□□ -0.33
PDZRN3-202ENST00000308537 H7C1H1 209 aa12.98□□□□□ -0.33
PDZRN3-202ENST00000308537 SMR3BP02814 79 aaPredicted RBP12.98□□□□□ -0.33
PDZRN3-202ENST00000308537 TMEM241Q24JQ0 296 aa12.98□□□□□ -0.33
PDZRN3-202ENST00000308537 CT83Q5H943 113 aa12.98□□□□□ -0.33
PDZRN3-202ENST00000308537 KRTAP26-1Q6PEX3 210 aa12.98□□□□□ -0.33
PDZRN3-202ENST00000308537 LINC01551Q86U37 167 aa12.98□□□□□ -0.33
PDZRN3-202ENST00000308537 C15orf54Q8N8G6 183 aa12.98□□□□□ -0.33
PDZRN3-202ENST00000308537 PRR34Q9NV39 138 aa12.98□□□□□ -0.33
PDZRN3-202ENST00000308537 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.97□□□□□ -0.33
PDZRN3-202ENST00000308537 TMEM262E9PQX1 116 aa12.97□□□□□ -0.33
PDZRN3-202ENST00000308537 Q0VG73 95 aa12.97□□□□□ -0.33
PDZRN3-202ENST00000308537 TMEM97Q5BJF2 176 aa12.97□□□□□ -0.33
PDZRN3-202ENST00000308537 SMIM15Q7Z3B0 74 aa12.97□□□□□ -0.33
PDZRN3-202ENST00000308537 BORCS7Q96B45 105 aa12.97□□□□□ -0.33
PDZRN3-202ENST00000308537 CHCHD5Q9BSY4 110 aa12.97□□□□□ -0.33
PDZRN3-202ENST00000308537 DPH3P1Q9H4G8 78 aa12.97□□□□□ -0.33
PDZRN3-202ENST00000308537 RBX1P62877 108 aa12.96□□□□□ -0.33
PDZRN3-202ENST00000308537 TWIST1Q15672 202 aa12.96□□□□□ -0.33
PDZRN3-202ENST00000308537 RASL11AQ6T310 242 aa12.96□□□□□ -0.33
PDZRN3-202ENST00000308537 OSTCQ9NRP0 149 aa12.96□□□□□ -0.33
PDZRN3-202ENST00000308537 GAGE6Q13070 117 aa12.95□□□□□ -0.34
PDZRN3-202ENST00000308537 LINC01620Q4KN68 170 aa12.95□□□□□ -0.34
PDZRN3-202ENST00000308537 NAT8Q9UHE5 227 aa12.95□□□□□ -0.34
PDZRN3-202ENST00000308537 TRBV25-1A0A075B6N4 114 aa12.94□□□□□ -0.34
PDZRN3-202ENST00000308537 ANGP03950 147 aaKnown RBP12.94□□□□□ -0.34
PDZRN3-202ENST00000308537 KCNIP4Q6PIL6 250 aa12.94□□□□□ -0.34
PDZRN3-202ENST00000308537 NIT2Q9NQR4 276 aa12.94□□□□□ -0.34
PDZRN3-202ENST00000308537 FOXA3P55318 350 aaPredicted RBP12.93□□□□□ -0.34
PDZRN3-202ENST00000308537 GATD1Q8NB37 220 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms