RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 TMEM136Q6ZRR5 245 aa12.51□□□□□ -0.41
TMED3-201ENST00000299705 NEXN-AS1Q8NBZ9 246 aa12.51□□□□□ -0.41
TMED3-201ENST00000299705 RPL36ALQ969Q0 106 aaKnown RBP12.51□□□□□ -0.41
TMED3-201ENST00000299705 DNAJC30Q96LL9 226 aa12.51□□□□□ -0.41
TMED3-201ENST00000299705 NIT2Q9NQR4 276 aa12.51□□□□□ -0.41
TMED3-201ENST00000299705 CSMD3Q7Z407 3707 aa12.51□□□□□ -0.41
TMED3-201ENST00000299705 TRBV7-3A0A075B6L6 115 aa12.5□□□□□ -0.41
TMED3-201ENST00000299705 TRAV26-2A0A0B4J265 109 aa12.5□□□□□ -0.41
TMED3-201ENST00000299705 GAGE12JA6NER3 117 aa12.5□□□□□ -0.41
TMED3-201ENST00000299705 HLA-DQA1P01909 254 aa12.5□□□□□ -0.41
TMED3-201ENST00000299705 GAGE1Q13065 139 aa12.5□□□□□ -0.41
TMED3-201ENST00000299705 GAGE4Q13068 117 aa12.5□□□□□ -0.41
TMED3-201ENST00000299705 GAGE5Q13069 117 aa12.5□□□□□ -0.41
TMED3-201ENST00000299705 GAGE13Q4V321 117 aa12.5□□□□□ -0.41
TMED3-201ENST00000299705 NEGR1Q7Z3B1 354 aa12.49□□□□□ -0.41
TMED3-201ENST00000299705 ZNRF2Q8NHG8 242 aa12.49□□□□□ -0.41
TMED3-201ENST00000299705 PPBPP02775 128 aa12.48□□□□□ -0.41
TMED3-201ENST00000299705 MT-ND6P03923 174 aa12.48□□□□□ -0.41
TMED3-201ENST00000299705 PPP1R17O96001 155 aa12.47□□□□□ -0.41
TMED3-201ENST00000299705 UBE2D3P61077 147 aa12.47□□□□□ -0.41
TMED3-201ENST00000299705 UBE2D2P62837 147 aa12.47□□□□□ -0.41
TMED3-201ENST00000299705 TNFRSF18Q9Y5U5 241 aa12.47□□□□□ -0.41
TMED3-201ENST00000299705 DYNC2H1Q8NCM8 4307 aaKnown RBP12.47□□□□□ -0.41
TMED3-201ENST00000299705 STARD9Q9P2P6 4700 aa12.47□□□□□ -0.41
TMED3-201ENST00000299705 CKS2P33552 79 aa12.46□□□□□ -0.41
TMED3-201ENST00000299705 ATP6V0E2Q8NHE4 81 aa12.46□□□□□ -0.41
TMED3-201ENST00000299705 TRBV6-5A0A0K0K1A5 114 aa12.46□□□□□ -0.42
TMED3-201ENST00000299705 GAS8-AS1O95177 125 aa12.46□□□□□ -0.42
TMED3-201ENST00000299705 RPL39LQ96EH5 51 aaKnown RBP12.46□□□□□ -0.42
TMED3-201ENST00000299705 D6R8Y8 96 aa12.45□□□□□ -0.42
TMED3-201ENST00000299705 SMKR1H3BMG3 65 aa12.45□□□□□ -0.42
TMED3-201ENST00000299705 SCO1O75880 301 aa12.45□□□□□ -0.42
TMED3-201ENST00000299705 RPS10P46783 165 aaKnown RBP12.45□□□□□ -0.42
TMED3-201ENST00000299705 TIRAPP58753 221 aa12.45□□□□□ -0.42
TMED3-201ENST00000299705 OR10J3Q5JRS4 329 aa12.45□□□□□ -0.42
TMED3-201ENST00000299705 ORMDL3Q8N138 153 aa12.45□□□□□ -0.42
TMED3-201ENST00000299705 NRACQ8N912 160 aa12.45□□□□□ -0.42
TMED3-201ENST00000299705 NCR2O95944 276 aa12.44□□□□□ -0.42
TMED3-201ENST00000299705 APCSP02743 223 aa12.44□□□□□ -0.42
TMED3-201ENST00000299705 ESRGQ1W209 222 aa12.44□□□□□ -0.42
TMED3-201ENST00000299705 LYPD5Q6UWN5 251 aa12.44□□□□□ -0.42
TMED3-201ENST00000299705 DAZ4Q86SG3 579 aaKnown RBP12.44□□□□□ -0.42
TMED3-201ENST00000299705 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.44□□□□□ -0.42
TMED3-201ENST00000299705 GTSF1LQ9H1H1 148 aa12.44□□□□□ -0.42
TMED3-201ENST00000299705 DAZ3Q9NR90 486 aaKnown RBP12.44□□□□□ -0.42
TMED3-201ENST00000299705 PHOX2AO14813 284 aa12.43□□□□□ -0.42
TMED3-201ENST00000299705 CCL18P55774 89 aa12.43□□□□□ -0.42
TMED3-201ENST00000299705 COLCA2A8K830 154 aa12.42□□□□□ -0.42
TMED3-201ENST00000299705 C20orf78Q9BR46 151 aa12.42□□□□□ -0.42
TMED3-201ENST00000299705 MRPL18Q9H0U6 180 aaKnown RBP12.42□□□□□ -0.42
TMED3-201ENST00000299705 ST20Q9HBF5 79 aa12.42□□□□□ -0.42
TMED3-201ENST00000299705 LAMTOR2Q9Y2Q5 125 aa12.42□□□□□ -0.42
TMED3-201ENST00000299705 TRAPPC1Q9Y5R8 145 aa12.42□□□□□ -0.42
TMED3-201ENST00000299705 SDHAF1A6NFY7 115 aa12.41□□□□□ -0.42
TMED3-201ENST00000299705 TNFRSF6BO95407 300 aa12.41□□□□□ -0.42
TMED3-201ENST00000299705 LGALS9CQ6DKI2 356 aa12.41□□□□□ -0.42
TMED3-201ENST00000299705 PRELID3AQ96N28 172 aa12.41□□□□□ -0.42
TMED3-201ENST00000299705 TENM2Q9NT68 2774 aa12.41□□□□□ -0.42
TMED3-201ENST00000299705 POLR2KP53803 58 aaKnown RBP12.4□□□□□ -0.42
TMED3-201ENST00000299705 SUMO2P61956 95 aaKnown RBP12.4□□□□□ -0.42
TMED3-201ENST00000299705 FABP9Q0Z7S8 132 aa12.4□□□□□ -0.42
TMED3-201ENST00000299705 TMEM97Q5BJF2 176 aa12.4□□□□□ -0.42
TMED3-201ENST00000299705 LINC00588Q9Y4M8 146 aa12.4□□□□□ -0.42
TMED3-201ENST00000299705 NPYP01303 97 aa12.4□□□□□ -0.43
TMED3-201ENST00000299705 RPL32P62910 135 aaKnown RBP12.4□□□□□ -0.43
TMED3-201ENST00000299705 TMEM70Q9BUB7 260 aa12.4□□□□□ -0.43
TMED3-201ENST00000299705 MRPS16Q9Y3D3 137 aaKnown RBP12.4□□□□□ -0.43
TMED3-201ENST00000299705 IGHV3-38A0A0C4DH36 116 aa12.39□□□□□ -0.43
TMED3-201ENST00000299705 KIAA1644Q3SXP7 199 aa12.39□□□□□ -0.43
TMED3-201ENST00000299705 TRBV27A0A0K0K1C4 114 aa12.38□□□□□ -0.43
TMED3-201ENST00000299705 PRSS47A8MTI9 375 aa12.38□□□□□ -0.43
TMED3-201ENST00000299705 LELP1Q5T871 98 aa12.38□□□□□ -0.43
TMED3-201ENST00000299705 UPK3BQ9BT76 320 aa12.38□□□□□ -0.43
TMED3-201ENST00000299705 PLECQ15149 4684 aaKnown RBP12.38□□□□□ -0.43
TMED3-201ENST00000299705 I3L3M4 83 aa12.37□□□□□ -0.43
TMED3-201ENST00000299705 VCYO14598 125 aa12.37□□□□□ -0.43
TMED3-201ENST00000299705 RAB5AP20339 215 aa12.37□□□□□ -0.43
TMED3-201ENST00000299705 UBE2DNLQ8IWF7 75 aa12.37□□□□□ -0.43
TMED3-201ENST00000299705 TRBV6-8A0A0A6YYG3 113 aa12.36□□□□□ -0.43
TMED3-201ENST00000299705 PMCHP20382 165 aa12.36□□□□□ -0.43
TMED3-201ENST00000299705 NTM-AS1Q6ZSK4 140 aa12.36□□□□□ -0.43
TMED3-201ENST00000299705 LINC00476Q8WZB0 136 aa12.36□□□□□ -0.43
TMED3-201ENST00000299705 ALKBH7Q9BT30 221 aaPredicted RBP12.36□□□□□ -0.43
TMED3-201ENST00000299705 COTL1Q14019 142 aa12.35□□□□□ -0.43
TMED3-201ENST00000299705 SMIM2Q9BVW6 85 aa12.35□□□□□ -0.43
TMED3-201ENST00000299705 MAP1LC3AQ9H492 121 aa12.35□□□□□ -0.43
TMED3-201ENST00000299705 TRAV8-6A0A0B4J262 113 aa12.34□□□□□ -0.43
TMED3-201ENST00000299705 IQCJQ1A5X6 159 aa12.34□□□□□ -0.43
TMED3-201ENST00000299705 IGHV1-24A0A0C4DH33 117 aa12.33□□□□□ -0.44
TMED3-201ENST00000299705 TCAPO15273 167 aa12.33□□□□□ -0.44
TMED3-201ENST00000299705 LY6G6CO95867 125 aa12.33□□□□□ -0.44
TMED3-201ENST00000299705 KIR2DL4Q99706 377 aa12.33□□□□□ -0.44
TMED3-201ENST00000299705 IGLV2-18A0A075B6J9 118 aa12.32□□□□□ -0.44
TMED3-201ENST00000299705 TRBV25-1A0A075B6N4 114 aa12.32□□□□□ -0.44
TMED3-201ENST00000299705 TSHBP01222 138 aa12.32□□□□□ -0.44
TMED3-201ENST00000299705 TRGC2P03986 189 aa12.32□□□□□ -0.44
TMED3-201ENST00000299705 Q9H8V8 135 aa12.31□□□□□ -0.44
TMED3-201ENST00000299705 NXT2Q9NPJ8 142 aaKnown RBP12.31□□□□□ -0.44
TMED3-201ENST00000299705 LOC389332A0A1B0GUA5 103 aa12.3□□□□□ -0.44
TMED3-201ENST00000299705 SIVA1O15304 175 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms