RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 FAM120AOSQ5T036 256 aa9.44□□□□□ -0.9
PCF11-201ENST00000298281 ACACBO00763 2458 aa9.44□□□□□ -0.9
PCF11-201ENST00000298281 Q6ZR03 302 aa9.44□□□□□ -0.9
PCF11-201ENST00000298281 NPYP01303 97 aa9.44□□□□□ -0.9
PCF11-201ENST00000298281 CRYGBP07316 175 aa9.44□□□□□ -0.9
PCF11-201ENST00000298281 SIP14410 1827 aa9.44□□□□□ -0.9
PCF11-201ENST00000298281 NUP210Q8TEM1 1887 aaPredicted RBP9.43□□□□□ -0.9
PCF11-201ENST00000298281 COX7BP24311 80 aa9.43□□□□□ -0.9
PCF11-201ENST00000298281 DEFB112Q30KQ8 113 aa9.43□□□□□ -0.9
PCF11-201ENST00000298281 CYYR1Q96J86 154 aa9.43□□□□□ -0.9
PCF11-201ENST00000298281 C15orf65H3BRN8 121 aa9.43□□□□□ -0.9
PCF11-201ENST00000298281 K7EP34 96 aa9.43□□□□□ -0.9
PCF11-201ENST00000298281 FXYD5Q96DB9 178 aa9.43□□□□□ -0.9
PCF11-201ENST00000298281 M0R2N4 97 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 ADCYAP1P18509 176 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 PLXNA4Q9HCM2 1894 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 TRBV7-3A0A075B6L6 115 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 DEFB113Q30KQ7 82 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 DOPEY1Q5JWR5 2465 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 WISP1O95388 367 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 CRYGDP07320 174 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 SIRPDQ9H106 197 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 RAI1Q7Z5J4 1906 aaPredicted RBP9.42□□□□□ -0.9
PCF11-201ENST00000298281 ODF1Q14990 250 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 DKK2Q9UBU2 259 aa9.42□□□□□ -0.9
PCF11-201ENST00000298281 LECT2O14960 151 aa9.41□□□□□ -0.9
PCF11-201ENST00000298281 LY6G6CO95867 125 aa9.41□□□□□ -0.9
PCF11-201ENST00000298281 ASPHD1Q5U4P2 390 aa9.41□□□□□ -0.9
PCF11-201ENST00000298281 IGLC7A0M8Q6 106 aa9.41□□□□□ -0.9
PCF11-201ENST00000298281 SPRY2O43597 315 aa9.41□□□□□ -0.9
PCF11-201ENST00000298281 FAM240AA0A1B0GVK7 77 aa9.4□□□□□ -0.9
PCF11-201ENST00000298281 IL15RAQ13261 267 aa9.4□□□□□ -0.9
PCF11-201ENST00000298281 Q6ZVH6 145 aa9.4□□□□□ -0.9
PCF11-201ENST00000298281 IGHV2-5P01817 119 aa9.4□□□□□ -0.9
PCF11-201ENST00000298281 NDUFS7O75251 213 aa9.4□□□□□ -0.91
PCF11-201ENST00000298281 RPL39LQ96EH5 51 aaKnown RBP9.39□□□□□ -0.91
PCF11-201ENST00000298281 C1orf147Q96MC9 270 aaPredicted RBP9.39□□□□□ -0.91
PCF11-201ENST00000298281 LGALS9O00182 355 aa9.39□□□□□ -0.91
PCF11-201ENST00000298281 IGLL1P15814 213 aa9.39□□□□□ -0.91
PCF11-201ENST00000298281 IGLV2-18A0A075B6J9 118 aa9.38□□□□□ -0.91
PCF11-201ENST00000298281 GATA1P15976 413 aaPredicted RBP9.38□□□□□ -0.91
PCF11-201ENST00000298281 SCXQ7RTU7 201 aa9.38□□□□□ -0.91
PCF11-201ENST00000298281 IGLV9-49A0A0B4J1Y8 123 aa9.38□□□□□ -0.91
PCF11-201ENST00000298281 IGF2-ASQ6U949 168 aa9.38□□□□□ -0.91
PCF11-201ENST00000298281 CXCL5P42830 114 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 HILS1P60008 231 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 PROK2Q9HC23 129 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 V9GYY9 64 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 MUC6Q6W4X9 2439 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 PLA2G2CQ5R387 149 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 ODF3L1Q8IXM7 274 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 LY6G6EA0A0G2JKS1 128 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 HIST2H2BDQ6DRA6 164 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 FAM19A5Q7Z5A7 132 aaPredicted RBP9.37□□□□□ -0.91
PCF11-201ENST00000298281 TMEM263Q8WUH6 116 aaKnown RBP9.37□□□□□ -0.91
PCF11-201ENST00000298281 TPSG1Q9NRR2 321 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 ZNF726P1Q15940 193 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 CACNA1AO00555 2505 aa9.37□□□□□ -0.91
PCF11-201ENST00000298281 C10orf91Q5T1B1 145 aa9.36□□□□□ -0.91
PCF11-201ENST00000298281 TEN1Q86WV5 123 aa9.36□□□□□ -0.91
PCF11-201ENST00000298281 PRSS33Q8NF86 280 aa9.36□□□□□ -0.91
PCF11-201ENST00000298281 BDP1A6H8Y1 2624 aa9.36□□□□□ -0.91
PCF11-201ENST00000298281 NDUFC2-KCTD14E9PQ53 114 aa9.36□□□□□ -0.91
PCF11-201ENST00000298281 Q8N9L7 120 aa9.36□□□□□ -0.91
PCF11-201ENST00000298281 NOTCH2Q04721 2471 aa9.36□□□□□ -0.91
PCF11-201ENST00000298281 HIVEP2P31629 2446 aa9.35□□□□□ -0.91
PCF11-201ENST00000298281 TRAV26-1A0A087WT03 109 aa9.35□□□□□ -0.91
PCF11-201ENST00000298281 CLEC2BQ92478 149 aa9.35□□□□□ -0.91
PCF11-201ENST00000298281 FAM215AQ9Y5M1 114 aa9.35□□□□□ -0.91
PCF11-201ENST00000298281 AGPAT4-IT1Q9H0P7 198 aa9.35□□□□□ -0.91
PCF11-201ENST00000298281 MYO18BQ8IUG5 2567 aa9.35□□□□□ -0.91
PCF11-201ENST00000298281 PTPRBP23467 1997 aa9.35□□□□□ -0.91
PCF11-201ENST00000298281 CUL9Q8IWT3 2517 aa9.35□□□□□ -0.91
PCF11-201ENST00000298281 MIR7-3HGQ8N6C7 128 aa9.35□□□□□ -0.91
PCF11-201ENST00000298281 CCL25O15444 150 aa9.34□□□□□ -0.91
PCF11-201ENST00000298281 PPDPFQ9H3Y8 114 aa9.34□□□□□ -0.91
PCF11-201ENST00000298281 ZNF747Q9BV97 191 aa9.34□□□□□ -0.91
PCF11-201ENST00000298281 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.34□□□□□ -0.91
PCF11-201ENST00000298281 A4D1N5 150 aa9.34□□□□□ -0.91
PCF11-201ENST00000298281 IGLV3-1P01715 115 aa9.34□□□□□ -0.91
PCF11-201ENST00000298281 Q8N1Y9 231 aa9.34□□□□□ -0.91
PCF11-201ENST00000298281 MED14OSP0DP75 135 aa9.34□□□□□ -0.91
PCF11-201ENST00000298281 KIAA1671Q9BY89 1806 aa9.33□□□□□ -0.92
PCF11-201ENST00000298281 PDE6GP18545 87 aa9.33□□□□□ -0.92
PCF11-201ENST00000298281 NOTCH4Q99466 2003 aa9.33□□□□□ -0.92
PCF11-201ENST00000298281 C1orf158Q8N1D5 194 aa9.33□□□□□ -0.92
PCF11-201ENST00000298281 U3KQA8 63 aa9.33□□□□□ -0.92
PCF11-201ENST00000298281 SPANXB1Q9NS25 103 aaPredicted RBP9.32□□□□□ -0.92
PCF11-201ENST00000298281 PIP4P1Q86T03 277 aa9.32□□□□□ -0.92
PCF11-201ENST00000298281 CCDC168Q8NDH2 2452 aa9.32□□□□□ -0.92
PCF11-201ENST00000298281 SLX1AQ9BQ83 275 aa9.32□□□□□ -0.92
PCF11-201ENST00000298281 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
PCF11-201ENST00000298281 C3orf84H3BNL1 204 aa9.32□□□□□ -0.92
PCF11-201ENST00000298281 G3V4G9 280 aa9.32□□□□□ -0.92
PCF11-201ENST00000298281 PIK3CD-AS1Q5SR53 167 aa9.32□□□□□ -0.92
PCF11-201ENST00000298281 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
PCF11-201ENST00000298281 DEFB131BA0A096LNP1 70 aa9.31□□□□□ -0.92
PCF11-201ENST00000298281 CIRBP-AS1Q8TBR5 109 aa9.31□□□□□ -0.92
PCF11-201ENST00000298281 LRP4O75096 1905 aa9.31□□□□□ -0.92
PCF11-201ENST00000298281 AJUBAQ96IF1 538 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms