RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 IGHV3-30-3P0DP02 117 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 CFHR3Q02985 330 aa3.78□□□□□ -1.8
CSMD3-201ENST00000297405 EFNA4P52798 201 aa3.78□□□□□ -1.81
CSMD3-201ENST00000297405 IGKV1-27A0A075B6S5 117 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 TIRAPP58753 221 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 WDR86Q86TI4 376 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 SELENOKQ9Y6D0 94 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 A0A1W2PRX2 142 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 COX7BP24311 80 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 ZNF726P1Q15940 193 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 CNFNQ9BYD5 112 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 PYGO1Q9Y3Y4 419 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 MUC22E2RYF6 1773 aaPredicted RBP3.77□□□□□ -1.81
CSMD3-201ENST00000297405 LYPD3O95274 346 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 UBE2D3P61077 147 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 C16orf47Q6ZP98 133 aaPredicted RBP3.77□□□□□ -1.81
CSMD3-201ENST00000297405 COX6B1P14854 86 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 SPAG11BQ08648 103 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 DHRS4-AS1Q9P1J3 65 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 IGKV1-16P04430 117 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 ZNF503Q96F45 646 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 A0A087WZ39 114 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 C16orf74Q96GX8 76 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 FAM120AOSQ5T036 256 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 MCRIP2Q9BUT9 160 aaKnown RBP3.77□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV3-49A0A0A0MS15 119 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 IGKV1-12A0A0C4DH73 117 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 PRYO14603 147 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 IGKV1D-12P01611 117 aa3.77□□□□□ -1.81
CSMD3-201ENST00000297405 PLAC8L1A1L4L8 177 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 LINC00173Q6ZV60 143 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 J3QLI3 93 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 ANGP03950 147 aaKnown RBP3.76□□□□□ -1.81
CSMD3-201ENST00000297405 E9PLN8 166 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 CYP4F30PQ9H0H9 118 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 TRBV6-5A0A0K0K1A5 114 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 TRBV27A0A0K0K1C4 114 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 B4DSR2 109 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 PSPNO60542 156 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 TMEM254Q8TBM7 123 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 TMEM89A2RUT3 159 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 H3BPC8 53 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 C8orf49Q96NF6 230 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 C7orf69Q9H7B7 122 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 IGLV3-1P01715 115 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV1-2P23083 117 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 C9orf85Q96MD7 179 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 C19orf71A6NCJ1 209 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 APRG1Q8IVJ8 170 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 C17orf77Q96MU5 243 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 HIGD2AQ9BW72 106 aa3.76□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV3-35A0A0C4DH35 117 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 C8orf87E5RJ46 101 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV7-4-1A0A0J9YVY3 117 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV3OR16-13A0A075B7E8 117 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV3-74A0A0B4J1X5 117 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 NHLRC4P0CG21 123 aaPredicted RBP3.75□□□□□ -1.81
CSMD3-201ENST00000297405 XGP55808 180 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 ENHOQ6UWT2 76 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 ITPR2Q14571 2701 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.75□□□□□ -1.81
CSMD3-201ENST00000297405 HRCT1Q6UXD1 115 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 PIP4P2Q8N4L2 257 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 C1orf147Q96MC9 270 aaPredicted RBP3.75□□□□□ -1.81
CSMD3-201ENST00000297405 A0A0J9YY99 117 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 ERC2-IT1O76042 136 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 NEXN-AS1Q8NBZ9 246 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 MSRB2Q9Y3D2 182 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 NSD1Q96L73 2696 aaPredicted RBP3.75□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV3-66A0A0C4DH42 116 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 TRIAP1O43715 76 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 ARRDC1-AS1Q9H2J1 176 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 TMEM223A0PJW6 202 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 MRGPRG-AS1Q2M3A8 158 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 CELA3BP08861 270 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 ZNF80P51504 273 aaPredicted RBP3.75□□□□□ -1.81
CSMD3-201ENST00000297405 FAM167A-AS1Q96KT0 104 aa3.75□□□□□ -1.81
CSMD3-201ENST00000297405 K7EQD1 137 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 PRM2P04554 102 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 UBE2DNLQ8IWF7 75 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 MBD3L2Q8NHZ7 208 aaPredicted RBP3.74□□□□□ -1.81
CSMD3-201ENST00000297405 ZNF491Q8N8L2 437 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 WFDC10AQ9H1F0 79 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 TRAV26-2A0A0B4J265 109 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 C2orf91Q6ZV80 131 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 SIRPDQ9H106 197 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 TP53AIP1Q9HCN2 124 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 WIPF1O43516 503 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 C20orf203Q8NBC4 194 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 WT1-ASQ06250 92 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 NFE4Q86UQ8 179 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 GGNQ86UU5 652 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 SLC22A18ASQ8N1D0 253 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV3-30P01768 117 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 IGHV3-30-5P0DP03 117 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 SCXQ7RTU7 201 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 ITPR3Q14573 2671 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 H3BUX3 64 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 K7EMT4 169 aa3.74□□□□□ -1.81
CSMD3-201ENST00000297405 B9D2Q9BPU9 175 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms