RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 GYPEP15421 78 aa15.19■□□□□ 0.02
PDLIM3-203ENST00000284771 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.19■□□□□ 0.02
PDLIM3-203ENST00000284771 WWC2-AS2Q96NR7 200 aa15.19■□□□□ 0.02
PDLIM3-203ENST00000284771 NIT2Q9NQR4 276 aa15.19■□□□□ 0.02
PDLIM3-203ENST00000284771 TRBV10-1A0A0K0K1A3 114 aa15.19■□□□□ 0.02
PDLIM3-203ENST00000284771 H7C1H1 209 aa15.19■□□□□ 0.02
PDLIM3-203ENST00000284771 ORMDL3Q8N138 153 aa15.19■□□□□ 0.02
PDLIM3-203ENST00000284771 PRADC1Q9BSG0 188 aa15.19■□□□□ 0.02
PDLIM3-203ENST00000284771 DYNC2H1Q8NCM8 4307 aaKnown RBP15.18■□□□□ 0.02
PDLIM3-203ENST00000284771 NPYP01303 97 aa15.18■□□□□ 0.02
PDLIM3-203ENST00000284771 PPBPP02775 128 aa15.18■□□□□ 0.02
PDLIM3-203ENST00000284771 CEMP1Q6PRD7 247 aaPredicted RBP15.18■□□□□ 0.02
PDLIM3-203ENST00000284771 ZNRF2Q8NHG8 242 aa15.18■□□□□ 0.02
PDLIM3-203ENST00000284771 GAGE12JA6NER3 117 aa15.17■□□□□ 0.02
PDLIM3-203ENST00000284771 H3BNG1 76 aa15.17■□□□□ 0.02
PDLIM3-203ENST00000284771 GAGE1Q13065 139 aa15.17■□□□□ 0.02
PDLIM3-203ENST00000284771 GAGE4Q13068 117 aa15.17■□□□□ 0.02
PDLIM3-203ENST00000284771 GAGE5Q13069 117 aa15.17■□□□□ 0.02
PDLIM3-203ENST00000284771 GAGE13Q4V321 117 aa15.17■□□□□ 0.02
PDLIM3-203ENST00000284771 PRELID3AQ96N28 172 aa15.17■□□□□ 0.02
PDLIM3-203ENST00000284771 TRBV7-3A0A075B6L6 115 aa15.16■□□□□ 0.02
PDLIM3-203ENST00000284771 IGLL5B9A064 214 aa15.16■□□□□ 0.02
PDLIM3-203ENST00000284771 TNFRSF6BO95407 300 aa15.16■□□□□ 0.02
PDLIM3-203ENST00000284771 LINC00694P0DN24 101 aa15.16■□□□□ 0.02
PDLIM3-203ENST00000284771 ALKBH7Q9BT30 221 aaPredicted RBP15.16■□□□□ 0.02
PDLIM3-203ENST00000284771 A0A096LPF7 62 aa15.16■□□□□ 0.02
PDLIM3-203ENST00000284771 OR10J3Q5JRS4 329 aa15.16■□□□□ 0.02
PDLIM3-203ENST00000284771 MUC7Q8TAX7 377 aa15.16■□□□□ 0.02
PDLIM3-203ENST00000284771 TRBV6-5A0A0K0K1A5 114 aa15.15■□□□□ 0.02
PDLIM3-203ENST00000284771 SRIP30626 198 aa15.14■□□□□ 0.01
PDLIM3-203ENST00000284771 ZFAND6Q6FIF0 208 aa15.14■□□□□ 0.01
PDLIM3-203ENST00000284771 PLECQ15149 4684 aaKnown RBP15.14■□□□□ 0.01
PDLIM3-203ENST00000284771 UBE2D3P61077 147 aa15.13■□□□□ 0.01
PDLIM3-203ENST00000284771 UBE2D2P62837 147 aa15.13■□□□□ 0.01
PDLIM3-203ENST00000284771 RPL36AP83881 106 aaKnown RBP15.13■□□□□ 0.01
PDLIM3-203ENST00000284771 RPL36ALQ969Q0 106 aaKnown RBP15.13■□□□□ 0.01
PDLIM3-203ENST00000284771 DNAJC30Q96LL9 226 aa15.13■□□□□ 0.01
PDLIM3-203ENST00000284771 TNFRSF18Q9Y5U5 241 aa15.13■□□□□ 0.01
PDLIM3-203ENST00000284771 POLR2KP53803 58 aaKnown RBP15.12■□□□□ 0.01
PDLIM3-203ENST00000284771 NUPR2A6NF83 97 aa15.12■□□□□ 0.01
PDLIM3-203ENST00000284771 SDHAF1A6NFY7 115 aa15.12■□□□□ 0.01
PDLIM3-203ENST00000284771 NUDT3O95989 172 aa15.12■□□□□ 0.01
PDLIM3-203ENST00000284771 SUMO2P61956 95 aaKnown RBP15.12■□□□□ 0.01
PDLIM3-203ENST00000284771 MRPL23Q16540 153 aaKnown RBP15.12■□□□□ 0.01
PDLIM3-203ENST00000284771 DEFB104AQ8WTQ1 72 aa15.12■□□□□ 0.01
PDLIM3-203ENST00000284771 TMEM70Q9BUB7 260 aa15.12■□□□□ 0.01
PDLIM3-203ENST00000284771 TENM2Q9NT68 2774 aa15.11■□□□□ 0.01
PDLIM3-203ENST00000284771 IGHV3-38A0A0C4DH36 116 aa15.11■□□□□ 0.01
PDLIM3-203ENST00000284771 NEGR1Q7Z3B1 354 aa15.11■□□□□ 0.01
PDLIM3-203ENST00000284771 ST20Q9HBF5 79 aa15.11■□□□□ 0.01
PDLIM3-203ENST00000284771 ICOSQ9Y6W8 199 aa15.11■□□□□ 0.01
PDLIM3-203ENST00000284771 PPP1R17O96001 155 aa15.1■□□□□ 0.01
PDLIM3-203ENST00000284771 C20orf78Q9BR46 151 aa15.1■□□□□ 0.01
PDLIM3-203ENST00000284771 LAMTOR2Q9Y2Q5 125 aa15.1■□□□□ 0.01
PDLIM3-203ENST00000284771 APLNQ9ULZ1 77 aa15.09■□□□□ 0.01
PDLIM3-203ENST00000284771 PRSS47A8MTI9 375 aa15.09■□□□□ 0.01
PDLIM3-203ENST00000284771 LOC389332A0A1B0GUA5 103 aa15.08■□□□□ 0
PDLIM3-203ENST00000284771 C15orf53Q8NAA6 179 aa15.08■□□□□ 0
PDLIM3-203ENST00000284771 ATP6V0E2Q8NHE4 81 aa15.08■□□□□ 0
PDLIM3-203ENST00000284771 C18orf32Q8TCD1 76 aa15.08■□□□□ 0
PDLIM3-203ENST00000284771 IGLV2-18A0A075B6J9 118 aa15.07■□□□□ 0
PDLIM3-203ENST00000284771 TRBV27A0A0K0K1C4 114 aa15.07■□□□□ 0
PDLIM3-203ENST00000284771 IQCJQ1A5X6 159 aa15.07■□□□□ 0
PDLIM3-203ENST00000284771 KLK5Q9Y337 293 aaPredicted RBP15.06■□□□□ 0
PDLIM3-203ENST00000284771 LYSTQ99698 3801 aa15.06■□□□□ 0
PDLIM3-203ENST00000284771 NTM-AS1Q6ZSK4 140 aa15.06■□□□□ 0
PDLIM3-203ENST00000284771 DAZ4Q86SG3 579 aaKnown RBP15.06■□□□□ 0
PDLIM3-203ENST00000284771 SMIM2Q9BVW6 85 aa15.06■□□□□ 0
PDLIM3-203ENST00000284771 DAZ3Q9NR90 486 aaKnown RBP15.06■□□□□ 0
PDLIM3-203ENST00000284771 IFI27P40305 119 aaPredicted RBP15.05■□□□□ -0
PDLIM3-203ENST00000284771 RPL32P62910 135 aaKnown RBP15.05■□□□□ -0
PDLIM3-203ENST00000284771 ESRGQ1W209 222 aa15.05■□□□□ -0
PDLIM3-203ENST00000284771 LYPD5Q6UWN5 251 aa15.05■□□□□ -0
PDLIM3-203ENST00000284771 MAP1LC3AQ9H492 121 aa15.05■□□□□ -0
PDLIM3-203ENST00000284771 VCYO14598 125 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST1H2BKO60814 126 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST1H2BJP06899 126 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST1H2BOP23527 126 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST1H2BBP33778 126 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST1H2BDP58876 126 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST1H2BCP62807 126 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST2H2BEQ16778 126 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.04■□□□□ -0
PDLIM3-203ENST00000284771 CASC10Q5T4H9 136 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST1H2BHQ93079 126 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST1H2BNQ99877 126 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 HIST1H2BMQ99879 126 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 GTSF1LQ9H1H1 148 aa15.04■□□□□ -0
PDLIM3-203ENST00000284771 I3L3M4 83 aa15.03■□□□□ -0
PDLIM3-203ENST00000284771 URB1-AS1Q96HZ7 61 aa15.03■□□□□ -0
PDLIM3-203ENST00000284771 SH2D6Q7Z4S9 175 aa15.03■□□□□ -0
PDLIM3-203ENST00000284771 TSHBP01222 138 aa15.02□□□□□ -0.01
PDLIM3-203ENST00000284771 PMCHP20382 165 aa15.02□□□□□ -0.01
PDLIM3-203ENST00000284771 TCAPO15273 167 aa15.01□□□□□ -0.01
PDLIM3-203ENST00000284771 Q8N8P6 123 aa15.01□□□□□ -0.01
PDLIM3-203ENST00000284771 C3orf84H3BNL1 204 aa15□□□□□ -0.01
PDLIM3-203ENST00000284771 PRSS3P2Q8NHM4 247 aa15□□□□□ -0.01
PDLIM3-203ENST00000284771 TRBV6-8A0A0A6YYG3 113 aa14.99□□□□□ -0.01
PDLIM3-203ENST00000284771 C1orf196B1AJZ1 125 aa14.99□□□□□ -0.01
PDLIM3-203ENST00000284771 TCTAP57738 103 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms