RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 F5H697 171 aa9.58□□□□□ -0.88
HMGN3-201ENST00000275036 NUDT10Q8NFP7 164 aa9.58□□□□□ -0.88
HMGN3-201ENST00000275036 OCC1Q8TAD7 63 aa9.58□□□□□ -0.88
HMGN3-201ENST00000275036 NUDT11Q96G61 164 aa9.58□□□□□ -0.88
HMGN3-201ENST00000275036 VPS13BQ7Z7G8 4022 aa9.57□□□□□ -0.88
HMGN3-201ENST00000275036 TRBV6-8A0A0A6YYG3 113 aa9.57□□□□□ -0.88
HMGN3-201ENST00000275036 BLOC1S1P78537 153 aa9.57□□□□□ -0.88
HMGN3-201ENST00000275036 LYZL1Q6UWQ5 148 aa9.57□□□□□ -0.88
HMGN3-201ENST00000275036 Q8N814 137 aa9.57□□□□□ -0.88
HMGN3-201ENST00000275036 RNASE7Q9H1E1 156 aaKnown RBP9.57□□□□□ -0.88
HMGN3-201ENST00000275036 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
HMGN3-201ENST00000275036 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
HMGN3-201ENST00000275036 CACNG7P62955 275 aa9.56□□□□□ -0.88
HMGN3-201ENST00000275036 HAMPP81172 84 aa9.56□□□□□ -0.88
HMGN3-201ENST00000275036 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
HMGN3-201ENST00000275036 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
HMGN3-201ENST00000275036 KLK12Q9UKR0 248 aa9.56□□□□□ -0.88
HMGN3-201ENST00000275036 URGCP-MRPS24S4R325 110 aa9.56□□□□□ -0.88
HMGN3-201ENST00000275036 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
HMGN3-201ENST00000275036 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
HMGN3-201ENST00000275036 M0QY20 66 aa9.55□□□□□ -0.88
HMGN3-201ENST00000275036 MGPP08493 103 aa9.55□□□□□ -0.88
HMGN3-201ENST00000275036 GCSHP23434 173 aa9.55□□□□□ -0.88
HMGN3-201ENST00000275036 SUMO4Q6EEV6 95 aa9.55□□□□□ -0.88
HMGN3-201ENST00000275036 TM2D2Q9BX73 214 aa9.55□□□□□ -0.88
HMGN3-201ENST00000275036 A0A087WX48 190 aa9.54□□□□□ -0.88
HMGN3-201ENST00000275036 IGLV5-52A0A0A0MRZ9 124 aa9.54□□□□□ -0.88
HMGN3-201ENST00000275036 F2Z2F3 143 aa9.54□□□□□ -0.88
HMGN3-201ENST00000275036 LECT2O14960 151 aa9.54□□□□□ -0.88
HMGN3-201ENST00000275036 NTF3P20783 257 aa9.54□□□□□ -0.88
HMGN3-201ENST00000275036 CTRLP40313 264 aa9.54□□□□□ -0.88
HMGN3-201ENST00000275036 MPV17L2Q567V2 206 aa9.54□□□□□ -0.88
HMGN3-201ENST00000275036 TOR2AQ5JU69 321 aa9.54□□□□□ -0.88
HMGN3-201ENST00000275036 CHCHD7Q9BUK0 85 aa9.54□□□□□ -0.88
HMGN3-201ENST00000275036 RPP21Q9H633 154 aaKnown RBP9.54□□□□□ -0.88
HMGN3-201ENST00000275036 HERC1Q15751 4861 aa9.54□□□□□ -0.88
HMGN3-201ENST00000275036 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
HMGN3-201ENST00000275036 UBE2WQ96B02 151 aa9.53□□□□□ -0.88
HMGN3-201ENST00000275036 CNFNQ9BYD5 112 aa9.53□□□□□ -0.88
HMGN3-201ENST00000275036 EPM2AB3EWF7 344 aa9.52□□□□□ -0.89
HMGN3-201ENST00000275036 TMEM262E9PQX1 116 aa9.52□□□□□ -0.89
HMGN3-201ENST00000275036 GTSF1Q8WW33 167 aa9.52□□□□□ -0.89
HMGN3-201ENST00000275036 BAALCQ8WXS3 180 aa9.52□□□□□ -0.89
HMGN3-201ENST00000275036 IGKV2D-24A0A075B6R9 120 aa9.51□□□□□ -0.89
HMGN3-201ENST00000275036 TRGC1P0CF51 173 aa9.51□□□□□ -0.89
HMGN3-201ENST00000275036 CEBPGP53567 150 aa9.51□□□□□ -0.89
HMGN3-201ENST00000275036 WDR73Q6P4I2 378 aa9.51□□□□□ -0.89
HMGN3-201ENST00000275036 ATRAIDQ6UW56 229 aa9.51□□□□□ -0.89
HMGN3-201ENST00000275036 ENHOQ6UWT2 76 aa9.51□□□□□ -0.89
HMGN3-201ENST00000275036 CHCHD5Q9BSY4 110 aa9.51□□□□□ -0.89
HMGN3-201ENST00000275036 DPH3P1Q9H4G8 78 aa9.51□□□□□ -0.89
HMGN3-201ENST00000275036 FAM30AQ9NZY2 134 aa9.51□□□□□ -0.89
HMGN3-201ENST00000275036 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
HMGN3-201ENST00000275036 SMR3BP02814 79 aaPredicted RBP9.5□□□□□ -0.89
HMGN3-201ENST00000275036 ELOBQ15370 118 aa9.5□□□□□ -0.89
HMGN3-201ENST00000275036 TWIST1Q15672 202 aa9.5□□□□□ -0.89
HMGN3-201ENST00000275036 Q5VSD8 79 aa9.5□□□□□ -0.89
HMGN3-201ENST00000275036 KCNIP4Q6PIL6 250 aa9.5□□□□□ -0.89
HMGN3-201ENST00000275036 C15orf54Q8N8G6 183 aa9.5□□□□□ -0.89
HMGN3-201ENST00000275036 Q8N976 141 aa9.5□□□□□ -0.89
HMGN3-201ENST00000275036 FAM210AQ96ND0 272 aa9.5□□□□□ -0.89
HMGN3-201ENST00000275036 EIF5A2Q9GZV4 153 aaKnown RBP9.5□□□□□ -0.89
HMGN3-201ENST00000275036 COX11Q9Y6N1 276 aa9.5□□□□□ -0.89
HMGN3-201ENST00000275036 H7C1H1 209 aa9.49□□□□□ -0.89
HMGN3-201ENST00000275036 GATCO43716 136 aaKnown RBP9.49□□□□□ -0.89
HMGN3-201ENST00000275036 TMEM97Q5BJF2 176 aa9.49□□□□□ -0.89
HMGN3-201ENST00000275036 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
HMGN3-201ENST00000275036 FAM231DQ6ZW35 169 aa9.49□□□□□ -0.89
HMGN3-201ENST00000275036 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.49□□□□□ -0.89
HMGN3-201ENST00000275036 RMI2Q96E14 147 aa9.49□□□□□ -0.89
HMGN3-201ENST00000275036 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
HMGN3-201ENST00000275036 ANGP03950 147 aaKnown RBP9.48□□□□□ -0.89
HMGN3-201ENST00000275036 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
HMGN3-201ENST00000275036 FOXA3P55318 350 aaPredicted RBP9.48□□□□□ -0.89
HMGN3-201ENST00000275036 GAGE6Q13070 117 aa9.48□□□□□ -0.89
HMGN3-201ENST00000275036 IQCJQ1A5X6 159 aa9.48□□□□□ -0.89
HMGN3-201ENST00000275036 DEFB104AQ8WTQ1 72 aa9.48□□□□□ -0.89
HMGN3-201ENST00000275036 SMIM7Q9BQ49 75 aa9.48□□□□□ -0.89
HMGN3-201ENST00000275036 NIT2Q9NQR4 276 aa9.48□□□□□ -0.89
HMGN3-201ENST00000275036 SRRM2Q9UQ35 2752 aaKnown RBP9.48□□□□□ -0.89
HMGN3-201ENST00000275036 TRBV25-1A0A075B6N4 114 aa9.47□□□□□ -0.89
HMGN3-201ENST00000275036 TRAV26-2A0A0B4J265 109 aa9.47□□□□□ -0.89
HMGN3-201ENST00000275036 NDUFS6O75380 124 aaKnown RBP9.47□□□□□ -0.89
HMGN3-201ENST00000275036 RBX1P62877 108 aa9.47□□□□□ -0.89
HMGN3-201ENST00000275036 Q0VG73 95 aa9.47□□□□□ -0.89
HMGN3-201ENST00000275036 LINC01551Q86U37 167 aa9.47□□□□□ -0.89
HMGN3-201ENST00000275036 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
HMGN3-201ENST00000275036 TMEM70Q9BUB7 260 aa9.47□□□□□ -0.89
HMGN3-201ENST00000275036 IGHV1-24A0A0C4DH33 117 aa9.46□□□□□ -0.9
HMGN3-201ENST00000275036 PGLYRP4Q96LB8 373 aa9.46□□□□□ -0.9
HMGN3-201ENST00000275036 A8MWL6 223 aa9.45□□□□□ -0.9
HMGN3-201ENST00000275036 CRPP02741 224 aa9.45□□□□□ -0.9
HMGN3-201ENST00000275036 PKIAP61925 76 aa9.45□□□□□ -0.9
HMGN3-201ENST00000275036 LINC01620Q4KN68 170 aa9.45□□□□□ -0.9
HMGN3-201ENST00000275036 CT83Q5H943 113 aa9.45□□□□□ -0.9
HMGN3-201ENST00000275036 CLPSL2Q6UWE3 100 aa9.45□□□□□ -0.9
HMGN3-201ENST00000275036 C1orf43Q9BWL3 253 aa9.45□□□□□ -0.9
HMGN3-201ENST00000275036 PRR34Q9NV39 138 aa9.45□□□□□ -0.9
HMGN3-201ENST00000275036 ZNF727A8MUV8 499 aa9.44□□□□□ -0.9
HMGN3-201ENST00000275036 C9JQL5 133 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms