RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CFC1P0CG37 223 aa12.04□□□□□ -0.48
MAP1LC3B-201ENST00000268607 TRPT1Q86TN4 253 aaKnown RBP12.04□□□□□ -0.48
MAP1LC3B-201ENST00000268607 ORMDL2Q53FV1 153 aa12.04□□□□□ -0.48
MAP1LC3B-201ENST00000268607 RPL39LQ96EH5 51 aaKnown RBP12.03□□□□□ -0.48
MAP1LC3B-201ENST00000268607 C2orf66Q6UXQ4 117 aa12.03□□□□□ -0.48
MAP1LC3B-201ENST00000268607 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.03□□□□□ -0.48
MAP1LC3B-201ENST00000268607 PPDPFQ9H3Y8 114 aa12.03□□□□□ -0.48
MAP1LC3B-201ENST00000268607 SUMO2P61956 95 aaKnown RBP12.02□□□□□ -0.49
MAP1LC3B-201ENST00000268607 EMP1P54849 157 aa12.02□□□□□ -0.49
MAP1LC3B-201ENST00000268607 C10orf126Q8N4M7 172 aa12.02□□□□□ -0.49
MAP1LC3B-201ENST00000268607 NTN5Q8WTR8 489 aaPredicted RBP12.02□□□□□ -0.49
MAP1LC3B-201ENST00000268607 ZFAND3Q9H8U3 227 aa12.02□□□□□ -0.49
MAP1LC3B-201ENST00000268607 HIVEP1P15822 2718 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 RBAKDNA6NC62 111 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 IGHV4-31P0DP07 118 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 Q6ZS46 218 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 Q8N1Y9 231 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 LINC01356Q8N9X3 169 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 SLC50A1Q9BRV3 221 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 VPREB3Q9UKI3 123 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 H3BUX3 64 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 J3KRW8 73 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
MAP1LC3B-201ENST00000268607 CLPSL1A2RUU4 121 aa12□□□□□ -0.49
MAP1LC3B-201ENST00000268607 M0R381 172 aa12□□□□□ -0.49
MAP1LC3B-201ENST00000268607 BUB3O43684 328 aa12□□□□□ -0.49
MAP1LC3B-201ENST00000268607 DSCR9P59020 149 aa12□□□□□ -0.49
MAP1LC3B-201ENST00000268607 C15orf53Q8NAA6 179 aa12□□□□□ -0.49
MAP1LC3B-201ENST00000268607 DEFB104AQ8WTQ1 72 aa12□□□□□ -0.49
MAP1LC3B-201ENST00000268607 YAE1D1Q9NRH1 226 aa12□□□□□ -0.49
MAP1LC3B-201ENST00000268607 MOB4Q9Y3A3 225 aa12□□□□□ -0.49
MAP1LC3B-201ENST00000268607 IGHV4-4A0A075B6R2 117 aa12□□□□□ -0.49
MAP1LC3B-201ENST00000268607 TRAV41A0A0B4J266 112 aa12□□□□□ -0.49
MAP1LC3B-201ENST00000268607 TEP1Q99973 2627 aaKnown RBP11.99□□□□□ -0.49
MAP1LC3B-201ENST00000268607 A0A0J9YY99 117 aa11.99□□□□□ -0.49
MAP1LC3B-201ENST00000268607 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
MAP1LC3B-201ENST00000268607 BLCAPP62952 87 aa11.99□□□□□ -0.49
MAP1LC3B-201ENST00000268607 PRO1854Q9UHT4 67 aa11.99□□□□□ -0.49
MAP1LC3B-201ENST00000268607 TRBV12-3P01733 135 aa11.99□□□□□ -0.49
MAP1LC3B-201ENST00000268607 Q6Q795 121 aa11.99□□□□□ -0.49
MAP1LC3B-201ENST00000268607 EEF1AKMT3Q96AZ1 226 aa11.99□□□□□ -0.49
MAP1LC3B-201ENST00000268607 SMR3AQ99954 134 aa11.99□□□□□ -0.49
MAP1LC3B-201ENST00000268607 H7C2G1 150 aa11.98□□□□□ -0.49
MAP1LC3B-201ENST00000268607 IGHV3-11P01762 117 aa11.98□□□□□ -0.49
MAP1LC3B-201ENST00000268607 C14orf178Q8N769 122 aaPredicted RBP11.98□□□□□ -0.49
MAP1LC3B-201ENST00000268607 BEX4Q9NWD9 120 aaPredicted RBP11.98□□□□□ -0.49
MAP1LC3B-201ENST00000268607 DEFB112Q30KQ8 113 aa11.98□□□□□ -0.49
MAP1LC3B-201ENST00000268607 PRR9Q5T870 116 aa11.98□□□□□ -0.49
MAP1LC3B-201ENST00000268607 JMJD1CQ15652 2540 aa11.98□□□□□ -0.49
MAP1LC3B-201ENST00000268607 C11orf86A6NJI1 115 aa11.97□□□□□ -0.49
MAP1LC3B-201ENST00000268607 CRYGDP07320 174 aa11.97□□□□□ -0.49
MAP1LC3B-201ENST00000268607 HIVEP2P31629 2446 aa11.97□□□□□ -0.49
MAP1LC3B-201ENST00000268607 DUSP14O95147 198 aaKnown RBP11.97□□□□□ -0.49
MAP1LC3B-201ENST00000268607 IGHV3-30P01768 117 aa11.97□□□□□ -0.49
MAP1LC3B-201ENST00000268607 IGHV4-59P01825 116 aa11.97□□□□□ -0.49
MAP1LC3B-201ENST00000268607 IGF1P05019 195 aa11.97□□□□□ -0.49
MAP1LC3B-201ENST00000268607 MGPP08493 103 aa11.97□□□□□ -0.49
MAP1LC3B-201ENST00000268607 IGHV3-30-5P0DP03 117 aa11.97□□□□□ -0.49
MAP1LC3B-201ENST00000268607 OR10J6PQ8NGY7 276 aa11.97□□□□□ -0.49
MAP1LC3B-201ENST00000268607 M0QXV9 152 aa11.96□□□□□ -0.49
MAP1LC3B-201ENST00000268607 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.49
MAP1LC3B-201ENST00000268607 BAHCC1Q9P281 2608 aa11.96□□□□□ -0.49
MAP1LC3B-201ENST00000268607 TRAV8-4A0A0B4J246 113 aa11.95□□□□□ -0.5
MAP1LC3B-201ENST00000268607 HIST2H2BDQ6DRA6 164 aa11.95□□□□□ -0.5
MAP1LC3B-201ENST00000268607 ELANEP08246 267 aa11.95□□□□□ -0.5
MAP1LC3B-201ENST00000268607 TSPEAR-AS2P59090 65 aa11.95□□□□□ -0.5
MAP1LC3B-201ENST00000268607 FN1P02751 2386 aaKnown RBP11.95□□□□□ -0.5
MAP1LC3B-201ENST00000268607 IGLV4-69A0A075B6H9 119 aa11.94□□□□□ -0.5
MAP1LC3B-201ENST00000268607 TRBV7-1A0A0A6YYK4 115 aa11.94□□□□□ -0.5
MAP1LC3B-201ENST00000268607 UNQ9165/PRO28630Q6UXU0 137 aa11.94□□□□□ -0.5
MAP1LC3B-201ENST00000268607 METTL26Q96S19 204 aa11.94□□□□□ -0.5
MAP1LC3B-201ENST00000268607 MDFICQ9P1T7 246 aa11.94□□□□□ -0.5
MAP1LC3B-201ENST00000268607 TSHBP01222 138 aa11.94□□□□□ -0.5
MAP1LC3B-201ENST00000268607 DPH3P1Q9H4G8 78 aa11.94□□□□□ -0.5
MAP1LC3B-201ENST00000268607 IGKV3-7A0A075B6H7 116 aa11.93□□□□□ -0.5
MAP1LC3B-201ENST00000268607 PF4V1P10720 104 aa11.93□□□□□ -0.5
MAP1LC3B-201ENST00000268607 C9orf47Q6ZRZ4 202 aa11.93□□□□□ -0.5
MAP1LC3B-201ENST00000268607 TRAV2A0A0B4J234 112 aa11.93□□□□□ -0.5
MAP1LC3B-201ENST00000268607 EIF4EBP3O60516 100 aaPredicted RBP11.93□□□□□ -0.5
MAP1LC3B-201ENST00000268607 S100A4P26447 101 aaKnown RBP11.93□□□□□ -0.5
MAP1LC3B-201ENST00000268607 HERVK_113P61574 105 aa11.93□□□□□ -0.5
MAP1LC3B-201ENST00000268607 DEFB1P60022 68 aa11.92□□□□□ -0.5
MAP1LC3B-201ENST00000268607 SLC25A29Q8N8R3 303 aa11.92□□□□□ -0.5
MAP1LC3B-201ENST00000268607 A4D1N5 150 aa11.92□□□□□ -0.5
MAP1LC3B-201ENST00000268607 C19orf54Q5BKX5 351 aa11.92□□□□□ -0.5
MAP1LC3B-201ENST00000268607 TMEM170BQ5T4T1 132 aa11.92□□□□□ -0.5
MAP1LC3B-201ENST00000268607 TP53TG1Q9Y2A0 90 aa11.92□□□□□ -0.5
MAP1LC3B-201ENST00000268607 PHLDA3Q9Y5J5 127 aa11.92□□□□□ -0.5
MAP1LC3B-201ENST00000268607 KLK9Q2XQG4 91 aa11.91□□□□□ -0.5
MAP1LC3B-201ENST00000268607 LRRC75A-AS1Q8N1F1 130 aa11.91□□□□□ -0.5
MAP1LC3B-201ENST00000268607 KLK9Q9UKQ9 250 aa11.91□□□□□ -0.5
MAP1LC3B-201ENST00000268607 ANK3Q12955 4377 aaKnown RBP11.91□□□□□ -0.5
MAP1LC3B-201ENST00000268607 A6NDX4 124 aa11.91□□□□□ -0.5
MAP1LC3B-201ENST00000268607 IGHV3-33P01772 117 aa11.91□□□□□ -0.5
MAP1LC3B-201ENST00000268607 SPANXA1Q9NS26 97 aa11.91□□□□□ -0.5
MAP1LC3B-201ENST00000268607 WNK1Q9H4A3 2382 aa11.9□□□□□ -0.5
MAP1LC3B-201ENST00000268607 RPL39P62891 51 aaKnown RBP11.9□□□□□ -0.5
MAP1LC3B-201ENST00000268607 LINC01620Q4KN68 170 aa11.9□□□□□ -0.5
MAP1LC3B-201ENST00000268607 C10orf99Q6UWK7 81 aa11.9□□□□□ -0.5
MAP1LC3B-201ENST00000268607 LINC01587Q99440 93 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms