RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 GAGE5Q13069 117 aa8.76□□□□□ -1.01
CLNS1A-201ENST00000263309 GAGE13Q4V321 117 aa8.76□□□□□ -1.01
CLNS1A-201ENST00000263309 TTC32Q5I0X7 151 aa8.76□□□□□ -1.01
CLNS1A-201ENST00000263309 OR10J3Q5JRS4 329 aa8.76□□□□□ -1.01
CLNS1A-201ENST00000263309 ZNRF2Q8NHG8 242 aa8.76□□□□□ -1.01
CLNS1A-201ENST00000263309 LYSTQ99698 3801 aa8.76□□□□□ -1.01
CLNS1A-201ENST00000263309 EVI2AP22794 236 aa8.75□□□□□ -1.01
CLNS1A-201ENST00000263309 LYPD5Q6UWN5 251 aa8.75□□□□□ -1.01
CLNS1A-201ENST00000263309 CNFNQ9BYD5 112 aa8.75□□□□□ -1.01
CLNS1A-201ENST00000263309 GTSF1LQ9H1H1 148 aa8.75□□□□□ -1.01
CLNS1A-201ENST00000263309 Q9H8V8 135 aa8.75□□□□□ -1.01
CLNS1A-201ENST00000263309 JPT2Q9H910 190 aa8.75□□□□□ -1.01
CLNS1A-201ENST00000263309 SMIM27A0A1W2PRY6 76 aa8.74□□□□□ -1.01
CLNS1A-201ENST00000263309 SIVA1O15304 175 aa8.74□□□□□ -1.01
CLNS1A-201ENST00000263309 ESRGQ1W209 222 aa8.74□□□□□ -1.01
CLNS1A-201ENST00000263309 RASL11AQ6T310 242 aa8.74□□□□□ -1.01
CLNS1A-201ENST00000263309 DAZ4Q86SG3 579 aaKnown RBP8.74□□□□□ -1.01
CLNS1A-201ENST00000263309 GTSF1Q8WW33 167 aa8.74□□□□□ -1.01
CLNS1A-201ENST00000263309 SAMD10Q9BYL1 202 aa8.74□□□□□ -1.01
CLNS1A-201ENST00000263309 DAZ3Q9NR90 486 aaKnown RBP8.74□□□□□ -1.01
CLNS1A-201ENST00000263309 MRPS16Q9Y3D3 137 aaKnown RBP8.74□□□□□ -1.01
CLNS1A-201ENST00000263309 CSMD3Q7Z407 3707 aa8.74□□□□□ -1.01
CLNS1A-201ENST00000263309 STARD9Q9P2P6 4700 aa8.73□□□□□ -1.01
CLNS1A-201ENST00000263309 TGIF2-C20orf24A0A0A6YYL0 155 aa8.73□□□□□ -1.01
CLNS1A-201ENST00000263309 TIRAPP58753 221 aa8.73□□□□□ -1.01
CLNS1A-201ENST00000263309 ATP5L2Q7Z4Y8 100 aa8.73□□□□□ -1.01
CLNS1A-201ENST00000263309 NUP35Q8NFH5 326 aa8.73□□□□□ -1.01
CLNS1A-201ENST00000263309 TMEM191AQ9H0A3 160 aa8.73□□□□□ -1.01
CLNS1A-201ENST00000263309 NIT2Q9NQR4 276 aa8.73□□□□□ -1.01
CLNS1A-201ENST00000263309 CAMPP49913 170 aa8.72□□□□□ -1.01
CLNS1A-201ENST00000263309 COX19Q49B96 90 aa8.72□□□□□ -1.01
CLNS1A-201ENST00000263309 UFSP1Q6NVU6 142 aa8.72□□□□□ -1.01
CLNS1A-201ENST00000263309 C10orf126Q8N4M7 172 aa8.72□□□□□ -1.01
CLNS1A-201ENST00000263309 UPK3BQ9BT76 320 aa8.72□□□□□ -1.01
CLNS1A-201ENST00000263309 LINC00588Q9Y4M8 146 aa8.72□□□□□ -1.01
CLNS1A-201ENST00000263309 C1orf196B1AJZ1 125 aa8.71□□□□□ -1.02
CLNS1A-201ENST00000263309 BTF3P20290 206 aaKnown RBP8.71□□□□□ -1.02
CLNS1A-201ENST00000263309 RPS10P46783 165 aaKnown RBP8.71□□□□□ -1.02
CLNS1A-201ENST00000263309 HBBP68871 147 aa8.71□□□□□ -1.02
CLNS1A-201ENST00000263309 LELP1Q5T871 98 aa8.71□□□□□ -1.02
CLNS1A-201ENST00000263309 ZNF575Q86XF7 245 aa8.71□□□□□ -1.02
CLNS1A-201ENST00000263309 MRAP2Q96G30 205 aa8.71□□□□□ -1.02
CLNS1A-201ENST00000263309 MSRB1Q9NZV6 116 aa8.71□□□□□ -1.02
CLNS1A-201ENST00000263309 A0A087WX48 190 aa8.7□□□□□ -1.02
CLNS1A-201ENST00000263309 TMEM262E9PQX1 116 aa8.7□□□□□ -1.02
CLNS1A-201ENST00000263309 SMAGPQ0VAQ4 97 aa8.7□□□□□ -1.02
CLNS1A-201ENST00000263309 HYDINQ4G0P3 5121 aa8.7□□□□□ -1.02
CLNS1A-201ENST00000263309 UBE2L6O14933 153 aa8.69□□□□□ -1.02
CLNS1A-201ENST00000263309 TCAPO15273 167 aa8.69□□□□□ -1.02
CLNS1A-201ENST00000263309 PPBPP02775 128 aa8.69□□□□□ -1.02
CLNS1A-201ENST00000263309 RAB5BP61020 215 aa8.69□□□□□ -1.02
CLNS1A-201ENST00000263309 SUMO4Q6EEV6 95 aa8.69□□□□□ -1.02
CLNS1A-201ENST00000263309 NFE4Q86UQ8 179 aa8.69□□□□□ -1.02
CLNS1A-201ENST00000263309 ST20Q9HBF5 79 aa8.69□□□□□ -1.02
CLNS1A-201ENST00000263309 TMA7Q9Y2S6 64 aaKnown RBP8.69□□□□□ -1.02
CLNS1A-201ENST00000263309 TRBV25-1A0A075B6N4 114 aa8.68□□□□□ -1.02
CLNS1A-201ENST00000263309 IGHV3-38A0A0C4DH36 116 aa8.68□□□□□ -1.02
CLNS1A-201ENST00000263309 LOC100131303A0A0U1RQF7 123 aa8.68□□□□□ -1.02
CLNS1A-201ENST00000263309 M0QY20 66 aa8.68□□□□□ -1.02
CLNS1A-201ENST00000263309 PMCHP20382 165 aa8.68□□□□□ -1.02
CLNS1A-201ENST00000263309 CKS2P33552 79 aa8.68□□□□□ -1.02
CLNS1A-201ENST00000263309 COTL1Q14019 142 aa8.68□□□□□ -1.02
CLNS1A-201ENST00000263309 MRPL54Q6P161 138 aaKnown RBP8.68□□□□□ -1.02
CLNS1A-201ENST00000263309 Q6ZSN1 163 aa8.68□□□□□ -1.02
CLNS1A-201ENST00000263309 KIF25-AS1Q9Y6Z4 181 aa8.68□□□□□ -1.02
CLNS1A-201ENST00000263309 IGLV2-18A0A075B6J9 118 aa8.67□□□□□ -1.02
CLNS1A-201ENST00000263309 NBDYA0A0U1RRE5 68 aa8.67□□□□□ -1.02
CLNS1A-201ENST00000263309 M0R2N4 97 aa8.67□□□□□ -1.02
CLNS1A-201ENST00000263309 UBE2D3P61077 147 aa8.67□□□□□ -1.02
CLNS1A-201ENST00000263309 UBE2D2P62837 147 aa8.67□□□□□ -1.02
CLNS1A-201ENST00000263309 C1orf134Q5TEV5 83 aa8.67□□□□□ -1.02
CLNS1A-201ENST00000263309 NEXN-AS1Q8NBZ9 246 aa8.67□□□□□ -1.02
CLNS1A-201ENST00000263309 GNB1LQ9BYB4 327 aa8.67□□□□□ -1.02
CLNS1A-201ENST00000263309 IGHV1-24A0A0C4DH33 117 aa8.66□□□□□ -1.02
CLNS1A-201ENST00000263309 VCYO14598 125 aa8.66□□□□□ -1.02
CLNS1A-201ENST00000263309 MT-ND6P03923 174 aa8.66□□□□□ -1.02
CLNS1A-201ENST00000263309 KIR2DL4Q99706 377 aa8.66□□□□□ -1.02
CLNS1A-201ENST00000263309 CHCHD5Q9BSY4 110 aa8.66□□□□□ -1.02
CLNS1A-201ENST00000263309 TRBV6-8A0A0A6YYG3 113 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 I3L3M4 83 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 EREGO14944 169 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 NCR2O95944 276 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 TRGC2P03986 189 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 RAB4AP20338 218 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 FCER1GP30273 86 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 TMEM18Q96B42 140 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 RMI2Q96E14 147 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 CHCHD7Q9BUK0 85 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 KRTAP17-1Q9BYP8 105 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 TRAPPC1Q9Y5R8 145 aa8.65□□□□□ -1.02
CLNS1A-201ENST00000263309 PHOX2AO14813 284 aa8.64□□□□□ -1.03
CLNS1A-201ENST00000263309 HLA-DQA1P01909 254 aa8.64□□□□□ -1.03
CLNS1A-201ENST00000263309 LINC00336Q6ZUF6 198 aa8.64□□□□□ -1.03
CLNS1A-201ENST00000263309 AMN1Q8IY45 258 aa8.64□□□□□ -1.03
CLNS1A-201ENST00000263309 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
CLNS1A-201ENST00000263309 TM2D2Q9BX73 214 aa8.64□□□□□ -1.03
CLNS1A-201ENST00000263309 COX11Q9Y6N1 276 aa8.64□□□□□ -1.03
CLNS1A-201ENST00000263309 PLECQ15149 4684 aaKnown RBP8.63□□□□□ -1.03
CLNS1A-201ENST00000263309 TRAV8-3A0A0A6YYJ7 113 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms