RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 TRAV4A0A0B4J268 109 aa12.02□□□□□ -0.48
SLC6A8-201ENST00000253122 UBE2D1P51668 147 aa12.02□□□□□ -0.48
SLC6A8-201ENST00000253122 COX8CQ7Z4L0 72 aa12.02□□□□□ -0.48
SLC6A8-201ENST00000253122 CRIP2P52943 208 aaPredicted RBP12.02□□□□□ -0.49
SLC6A8-201ENST00000253122 MTORP42345 2549 aa12.02□□□□□ -0.49
SLC6A8-201ENST00000253122 ABCA12Q86UK0 2595 aa12.02□□□□□ -0.49
SLC6A8-201ENST00000253122 NDUFV3P56181 108 aaKnown RBP12.02□□□□□ -0.49
SLC6A8-201ENST00000253122 DUX5Q96PT3 197 aa12.01□□□□□ -0.49
SLC6A8-201ENST00000253122 H3BUX3 64 aa12.01□□□□□ -0.49
SLC6A8-201ENST00000253122 ZFAND2AQ8N6M9 145 aa12.01□□□□□ -0.49
SLC6A8-201ENST00000253122 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
SLC6A8-201ENST00000253122 IGHV3-30-5P0DP03 117 aa12.01□□□□□ -0.49
SLC6A8-201ENST00000253122 LY6G5BQ8NDX9 201 aa12.01□□□□□ -0.49
SLC6A8-201ENST00000253122 FAM223BA6NKX1 122 aa12□□□□□ -0.49
SLC6A8-201ENST00000253122 FAM223AQ8IWN6 122 aa12□□□□□ -0.49
SLC6A8-201ENST00000253122 DAND5Q8N907 189 aa12□□□□□ -0.49
SLC6A8-201ENST00000253122 DAZ1Q9NQZ3 744 aaKnown RBP12□□□□□ -0.49
SLC6A8-201ENST00000253122 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
SLC6A8-201ENST00000253122 LEPROTO15243 131 aa12□□□□□ -0.49
SLC6A8-201ENST00000253122 CLEC2BQ92478 149 aa12□□□□□ -0.49
SLC6A8-201ENST00000253122 ADORA2A-AS1P86434 159 aa12□□□□□ -0.49
SLC6A8-201ENST00000253122 I3L3M4 83 aa11.99□□□□□ -0.49
SLC6A8-201ENST00000253122 IGHV3-33P01772 117 aa11.99□□□□□ -0.49
SLC6A8-201ENST00000253122 FBXL19-AS1Q494R0 122 aa11.99□□□□□ -0.49
SLC6A8-201ENST00000253122 ODF3BA8MYP8 253 aa11.99□□□□□ -0.49
SLC6A8-201ENST00000253122 NDUFA4O00483 81 aa11.99□□□□□ -0.49
SLC6A8-201ENST00000253122 CLPSL1A2RUU4 121 aa11.98□□□□□ -0.49
SLC6A8-201ENST00000253122 TIMM17AQ99595 171 aa11.98□□□□□ -0.49
SLC6A8-201ENST00000253122 IGHV3-38A0A0C4DH36 116 aa11.98□□□□□ -0.49
SLC6A8-201ENST00000253122 LINC01619G3V211 115 aa11.98□□□□□ -0.49
SLC6A8-201ENST00000253122 UBE2D3P61077 147 aa11.98□□□□□ -0.49
SLC6A8-201ENST00000253122 UBE2D2P62837 147 aa11.98□□□□□ -0.49
SLC6A8-201ENST00000253122 YAE1D1Q9NRH1 226 aa11.98□□□□□ -0.49
SLC6A8-201ENST00000253122 TSPEAR-AS2P59090 65 aa11.98□□□□□ -0.49
SLC6A8-201ENST00000253122 HERV-K104P63124 156 aa11.98□□□□□ -0.49
SLC6A8-201ENST00000253122 PRRC2AP48634 2157 aaKnown RBP11.98□□□□□ -0.49
SLC6A8-201ENST00000253122 ZFHX4Q86UP3 3567 aa11.97□□□□□ -0.49
SLC6A8-201ENST00000253122 CCDC179H3BU77 68 aa11.97□□□□□ -0.49
SLC6A8-201ENST00000253122 CEMP1Q6PRD7 247 aaPredicted RBP11.97□□□□□ -0.49
SLC6A8-201ENST00000253122 ZNRF2Q8NHG8 242 aa11.97□□□□□ -0.49
SLC6A8-201ENST00000253122 MDFICQ9P1T7 246 aa11.97□□□□□ -0.49
SLC6A8-201ENST00000253122 TMEM101Q96IK0 257 aa11.97□□□□□ -0.49
SLC6A8-201ENST00000253122 GNLYP22749 145 aa11.96□□□□□ -0.49
SLC6A8-201ENST00000253122 TOMM7Q9P0U1 55 aa11.96□□□□□ -0.49
SLC6A8-201ENST00000253122 TRBV10-2A0A0K0K1G8 114 aa11.96□□□□□ -0.5
SLC6A8-201ENST00000253122 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.5
SLC6A8-201ENST00000253122 IGHV4-4A0A075B6R2 117 aa11.95□□□□□ -0.5
SLC6A8-201ENST00000253122 RHODO00212 210 aa11.95□□□□□ -0.5
SLC6A8-201ENST00000253122 DNAL4O96015 105 aa11.95□□□□□ -0.5
SLC6A8-201ENST00000253122 RNASE3P12724 160 aaKnown RBP11.95□□□□□ -0.5
SLC6A8-201ENST00000253122 IGHV3-16A0A0C4DH30 117 aa11.95□□□□□ -0.5
SLC6A8-201ENST00000253122 C9orf153Q5TBE3 101 aa11.95□□□□□ -0.5
SLC6A8-201ENST00000253122 USMG5Q96IX5 58 aa11.95□□□□□ -0.5
SLC6A8-201ENST00000253122 PSMG3-AS1Q96PY0 264 aa11.95□□□□□ -0.5
SLC6A8-201ENST00000253122 IGHV1OR15-1A0A075B7D0 117 aa11.94□□□□□ -0.5
SLC6A8-201ENST00000253122 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
SLC6A8-201ENST00000253122 TRIAP1O43715 76 aa11.94□□□□□ -0.5
SLC6A8-201ENST00000253122 TRAV13-1A0A0B4J241 112 aa11.93□□□□□ -0.5
SLC6A8-201ENST00000253122 LINC01546A6NGU7 62 aa11.93□□□□□ -0.5
SLC6A8-201ENST00000253122 C19orf54Q5BKX5 351 aa11.93□□□□□ -0.5
SLC6A8-201ENST00000253122 LINC01587Q99440 93 aa11.93□□□□□ -0.5
SLC6A8-201ENST00000253122 IGLV4-69A0A075B6H9 119 aa11.93□□□□□ -0.5
SLC6A8-201ENST00000253122 A0A0J9YXY3 114 aa11.93□□□□□ -0.5
SLC6A8-201ENST00000253122 CRLF1O75462 422 aa11.93□□□□□ -0.5
SLC6A8-201ENST00000253122 BLCAPP62952 87 aa11.93□□□□□ -0.5
SLC6A8-201ENST00000253122 C5orf56Q8N8D9 126 aa11.93□□□□□ -0.5
SLC6A8-201ENST00000253122 CHCHD5Q9BSY4 110 aa11.93□□□□□ -0.5
SLC6A8-201ENST00000253122 TRGV11A0A075B6L2 103 aa11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 EPG5Q9HCE0 2579 aa11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 FHL3Q13643 280 aa11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 RHOHQ15669 191 aa11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 GAGE2AQ6NT46 116 aa11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 OR13C6PQ8NH95 151 aa11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 IGIPA6NJ69 53 aa11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 CRYGDP07320 174 aa11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 ZNF22P17026 224 aaPredicted RBP11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 SYNJ2BPP57105 145 aa11.92□□□□□ -0.5
SLC6A8-201ENST00000253122 A8MZ25 164 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 Q8N6K4 173 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 AJUBAQ96IF1 538 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 EDA2RQ9HAV5 297 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 FAM236AA0A1B0GUQ0 79 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 FAM236BA0A1B0GV22 79 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 C20orf203Q8NBC4 194 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 P0DMU3 169 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 FAM231AP0DMU4 169 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 FAM231CP0DMU5 169 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 PRIMA1Q86XR5 153 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 GPHB5Q86YW7 130 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 SVIPQ8NHG7 77 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 ZNF580Q9UK33 172 aa11.91□□□□□ -0.5
SLC6A8-201ENST00000253122 TRBV7-9A0A0J9YWB2 115 aa11.9□□□□□ -0.5
SLC6A8-201ENST00000253122 POLR2KP53803 58 aaKnown RBP11.9□□□□□ -0.5
SLC6A8-201ENST00000253122 ZZEF1O43149 2961 aa11.9□□□□□ -0.5
SLC6A8-201ENST00000253122 A0A0B4J2C4 111 aa11.9□□□□□ -0.51
SLC6A8-201ENST00000253122 EBI3Q14213 229 aa11.9□□□□□ -0.51
SLC6A8-201ENST00000253122 CDSNQ15517 529 aa11.9□□□□□ -0.51
SLC6A8-201ENST00000253122 DYNLRB2Q8TF09 96 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms