RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 M0R2N4 97 aa9.44□□□□□ -0.9
VEGFA-201ENST00000230480 RPS20P60866 119 aaKnown RBP9.44□□□□□ -0.9
VEGFA-201ENST00000230480 UBE2G1P62253 170 aa9.44□□□□□ -0.9
VEGFA-201ENST00000230480 ZNF876PQ49A33 203 aa9.44□□□□□ -0.9
VEGFA-201ENST00000230480 DMRTA1Q5VZB9 504 aa9.44□□□□□ -0.9
VEGFA-201ENST00000230480 BAGE2Q86Y30 109 aa9.44□□□□□ -0.9
VEGFA-201ENST00000230480 OR10G8Q8NGN5 311 aa9.44□□□□□ -0.9
VEGFA-201ENST00000230480 SAMD10Q9BYL1 202 aa9.44□□□□□ -0.9
VEGFA-201ENST00000230480 PRO0255Q9UI72 69 aa9.44□□□□□ -0.9
VEGFA-201ENST00000230480 HHLA3Q9XRX5 114 aa9.44□□□□□ -0.9
VEGFA-201ENST00000230480 C9JCJ5 164 aa9.43□□□□□ -0.9
VEGFA-201ENST00000230480 ORM1P02763 201 aa9.43□□□□□ -0.9
VEGFA-201ENST00000230480 GATA1P15976 413 aaPredicted RBP9.43□□□□□ -0.9
VEGFA-201ENST00000230480 CTRLP40313 264 aa9.43□□□□□ -0.9
VEGFA-201ENST00000230480 OR10J3Q5JRS4 329 aa9.43□□□□□ -0.9
VEGFA-201ENST00000230480 FAM162BQ5T6X4 162 aa9.43□□□□□ -0.9
VEGFA-201ENST00000230480 C19orf71A6NCJ1 209 aa9.42□□□□□ -0.9
VEGFA-201ENST00000230480 PAX4O43316 350 aa9.42□□□□□ -0.9
VEGFA-201ENST00000230480 ARMS2P0C7Q2 107 aa9.42□□□□□ -0.9
VEGFA-201ENST00000230480 GNB1LQ9BYB4 327 aa9.42□□□□□ -0.9
VEGFA-201ENST00000230480 MRPL18Q9H0U6 180 aaKnown RBP9.42□□□□□ -0.9
VEGFA-201ENST00000230480 MRPS16Q9Y3D3 137 aaKnown RBP9.42□□□□□ -0.9
VEGFA-201ENST00000230480 KIAA1109Q2LD37 5005 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 TMSB15BA0A087X1C1 80 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 H3BVH4 76 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 K7EQD1 137 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 SERF1AO75920 110 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 LINC00310P59036 64 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 CENPWQ5EE01 88 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 LYPD5Q6UWN5 251 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 OR4C5Q8NGB2 326 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 UPK3BQ9BT76 320 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 SSBP4Q9BWG4 385 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-201ENST00000230480 PAM16Q9Y3D7 125 aa9.41□□□□□ -0.9
VEGFA-201ENST00000230480 IGHV3-73A0A0B4J1V6 119 aa9.4□□□□□ -0.9
VEGFA-201ENST00000230480 A0A1B0GVY2 172 aa9.4□□□□□ -0.9
VEGFA-201ENST00000230480 NUPR1O60356 82 aa9.4□□□□□ -0.9
VEGFA-201ENST00000230480 CRYGDP07320 174 aa9.4□□□□□ -0.9
VEGFA-201ENST00000230480 HNRNPA3P51991 378 aaKnown RBP9.4□□□□□ -0.9
VEGFA-201ENST00000230480 C21orf62-AS1Q17RA5 79 aa9.4□□□□□ -0.9
VEGFA-201ENST00000230480 BAGE3Q86Y29 109 aa9.4□□□□□ -0.9
VEGFA-201ENST00000230480 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.9
VEGFA-201ENST00000230480 SLC25A29Q8N8R3 303 aa9.4□□□□□ -0.9
VEGFA-201ENST00000230480 TRGV4A0A0C4DH28 118 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 K7EN84 100 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 NXPH4O95158 308 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 LINC00694P0DN24 101 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 ASIPP42127 132 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 PMCHL1Q16048 86 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 SPATA45Q537H7 98 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 PIK3CD-AS1Q5SR53 167 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 Q8N976 141 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 LAMTOR2Q9Y2Q5 125 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 DNAH5Q8TE73 4624 aa9.39□□□□□ -0.91
VEGFA-201ENST00000230480 NBDYA0A0U1RRE5 68 aa9.38□□□□□ -0.91
VEGFA-201ENST00000230480 SNAI2O43623 268 aa9.38□□□□□ -0.91
VEGFA-201ENST00000230480 IGLC3P0DOY3 106 aa9.38□□□□□ -0.91
VEGFA-201ENST00000230480 GYPEP15421 78 aa9.38□□□□□ -0.91
VEGFA-201ENST00000230480 CCL18P55774 89 aa9.38□□□□□ -0.91
VEGFA-201ENST00000230480 RBX1P62877 108 aa9.38□□□□□ -0.91
VEGFA-201ENST00000230480 SLAQ13239 276 aa9.38□□□□□ -0.91
VEGFA-201ENST00000230480 UBE2V1Q13404 147 aa9.38□□□□□ -0.91
VEGFA-201ENST00000230480 Q9H8V8 135 aa9.38□□□□□ -0.91
VEGFA-201ENST00000230480 ICOSQ9Y6W8 199 aa9.38□□□□□ -0.91
VEGFA-201ENST00000230480 HLA-DQA1P01909 254 aa9.37□□□□□ -0.91
VEGFA-201ENST00000230480 PPBPP02775 128 aa9.37□□□□□ -0.91
VEGFA-201ENST00000230480 IGLC6P0CF74 106 aa9.37□□□□□ -0.91
VEGFA-201ENST00000230480 PTTG1IPP53801 180 aa9.37□□□□□ -0.91
VEGFA-201ENST00000230480 LINC00315P59091 139 aa9.37□□□□□ -0.91
VEGFA-201ENST00000230480 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
VEGFA-201ENST00000230480 C14orf178Q8N769 122 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-201ENST00000230480 OR10AG1Q8NH19 301 aa9.37□□□□□ -0.91
VEGFA-201ENST00000230480 OCC1Q8TAD7 63 aa9.37□□□□□ -0.91
VEGFA-201ENST00000230480 KIF25-AS1Q9Y6Z4 181 aa9.37□□□□□ -0.91
VEGFA-201ENST00000230480 HERC2O95714 4834 aa9.36□□□□□ -0.91
VEGFA-201ENST00000230480 TRBV6-4A0A1B0GX49 114 aa9.36□□□□□ -0.91
VEGFA-201ENST00000230480 MED14OSP0DP75 135 aa9.36□□□□□ -0.91
VEGFA-201ENST00000230480 BATFQ16520 125 aa9.36□□□□□ -0.91
VEGFA-201ENST00000230480 MRPL23Q16540 153 aaKnown RBP9.36□□□□□ -0.91
VEGFA-201ENST00000230480 PRR27Q6MZM9 219 aa9.36□□□□□ -0.91
VEGFA-201ENST00000230480 OSTCQ9NRP0 149 aa9.36□□□□□ -0.91
VEGFA-201ENST00000230480 COX11Q9Y6N1 276 aa9.36□□□□□ -0.91
VEGFA-201ENST00000230480 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
VEGFA-201ENST00000230480 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
VEGFA-201ENST00000230480 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
VEGFA-201ENST00000230480 ZFP2Q6ZN57 461 aa9.35□□□□□ -0.91
VEGFA-201ENST00000230480 Q6ZN92 141 aa9.35□□□□□ -0.91
VEGFA-201ENST00000230480 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
VEGFA-201ENST00000230480 LRP1BQ9NZR2 4599 aa9.35□□□□□ -0.91
VEGFA-201ENST00000230480 A0A087WWL8 130 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 A8MWV9 139 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 OR5AL1P0C617 328 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 AMTP48728 403 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 KRTDAPP60985 99 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 PET117Q6UWS5 81 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 SMIM15Q7Z3B0 74 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 STPG4Q8N801 248 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 NUDT11Q96G61 164 aa9.34□□□□□ -0.91
VEGFA-201ENST00000230480 MSRB1Q9NZV6 116 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms