RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 GATCO43716 136 aaKnown RBP12.77□□□□□ -0.37
TRAPPC6A-201ENST00000006275 RPL36AP83881 106 aaKnown RBP12.77□□□□□ -0.37
TRAPPC6A-201ENST00000006275 RPL36ALQ969Q0 106 aaKnown RBP12.77□□□□□ -0.37
TRAPPC6A-201ENST00000006275 K7EP13 123 aa12.76□□□□□ -0.37
TRAPPC6A-201ENST00000006275 FAM231DQ6ZW35 169 aa12.76□□□□□ -0.37
TRAPPC6A-201ENST00000006275 MSRB1Q9NZV6 116 aa12.76□□□□□ -0.37
TRAPPC6A-201ENST00000006275 VPS13BQ7Z7G8 4022 aa12.76□□□□□ -0.37
TRAPPC6A-201ENST00000006275 TRBV7-3A0A075B6L6 115 aa12.75□□□□□ -0.37
TRAPPC6A-201ENST00000006275 PEA15Q15121 130 aa12.75□□□□□ -0.37
TRAPPC6A-201ENST00000006275 C10orf126Q8N4M7 172 aa12.75□□□□□ -0.37
TRAPPC6A-201ENST00000006275 TNFRSF18Q9Y5U5 241 aa12.75□□□□□ -0.37
TRAPPC6A-201ENST00000006275 KIF25-AS1Q9Y6Z4 181 aa12.75□□□□□ -0.37
TRAPPC6A-201ENST00000006275 A0A087WTM6 91 aa12.74□□□□□ -0.37
TRAPPC6A-201ENST00000006275 MGPP08493 103 aa12.74□□□□□ -0.37
TRAPPC6A-201ENST00000006275 TRGC1P0CF51 173 aa12.74□□□□□ -0.37
TRAPPC6A-201ENST00000006275 NTF3P20783 257 aa12.74□□□□□ -0.37
TRAPPC6A-201ENST00000006275 CTRLP40313 264 aa12.74□□□□□ -0.37
TRAPPC6A-201ENST00000006275 LINC01556Q5JQF7 62 aa12.74□□□□□ -0.37
TRAPPC6A-201ENST00000006275 LINC01551Q86U37 167 aa12.74□□□□□ -0.37
TRAPPC6A-201ENST00000006275 NEXN-AS1Q8NBZ9 246 aa12.74□□□□□ -0.37
TRAPPC6A-201ENST00000006275 A0A087WWC5 75 aa12.73□□□□□ -0.37
TRAPPC6A-201ENST00000006275 HAMPP81172 84 aa12.73□□□□□ -0.37
TRAPPC6A-201ENST00000006275 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
TRAPPC6A-201ENST00000006275 NFE4Q86UQ8 179 aa12.73□□□□□ -0.37
TRAPPC6A-201ENST00000006275 OR10G8Q8NGN5 311 aa12.73□□□□□ -0.37
TRAPPC6A-201ENST00000006275 A8MWL6 223 aa12.72□□□□□ -0.37
TRAPPC6A-201ENST00000006275 IGHV3-30P01768 117 aa12.72□□□□□ -0.37
TRAPPC6A-201ENST00000006275 IGHV3-33P01772 117 aa12.72□□□□□ -0.37
TRAPPC6A-201ENST00000006275 IGHV3-30-3P0DP02 117 aa12.72□□□□□ -0.37
TRAPPC6A-201ENST00000006275 IGHV3-30-5P0DP03 117 aa12.72□□□□□ -0.37
TRAPPC6A-201ENST00000006275 GCSHP23434 173 aa12.72□□□□□ -0.37
TRAPPC6A-201ENST00000006275 UBE2D3P61077 147 aa12.72□□□□□ -0.37
TRAPPC6A-201ENST00000006275 UBE2D2P62837 147 aa12.72□□□□□ -0.37
TRAPPC6A-201ENST00000006275 C9JQL5 133 aa12.71□□□□□ -0.37
TRAPPC6A-201ENST00000006275 SRSF3P84103 164 aaKnown RBP12.71□□□□□ -0.37
TRAPPC6A-201ENST00000006275 TWIST1Q15672 202 aa12.71□□□□□ -0.37
TRAPPC6A-201ENST00000006275 FAM74A3Q4VXF1 159 aa12.71□□□□□ -0.37
TRAPPC6A-201ENST00000006275 GTSF1Q8WW33 167 aa12.71□□□□□ -0.37
TRAPPC6A-201ENST00000006275 SMDT1Q9H4I9 107 aa12.71□□□□□ -0.37
TRAPPC6A-201ENST00000006275 TMEM241Q24JQ0 296 aa12.7□□□□□ -0.38
TRAPPC6A-201ENST00000006275 CT83Q5H943 113 aa12.7□□□□□ -0.38
TRAPPC6A-201ENST00000006275 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC6A-201ENST00000006275 CNFNQ9BYD5 112 aa12.7□□□□□ -0.38
TRAPPC6A-201ENST00000006275 DPH3P1Q9H4G8 78 aa12.7□□□□□ -0.38
TRAPPC6A-201ENST00000006275 H7C1H1 209 aa12.69□□□□□ -0.38
TRAPPC6A-201ENST00000006275 OSTCQ9NRP0 149 aa12.69□□□□□ -0.38
TRAPPC6A-201ENST00000006275 RAB14P61106 215 aa12.68□□□□□ -0.38
TRAPPC6A-201ENST00000006275 SUMO4Q6EEV6 95 aa12.68□□□□□ -0.38
TRAPPC6A-201ENST00000006275 C15orf54Q8N8G6 183 aa12.68□□□□□ -0.38
TRAPPC6A-201ENST00000006275 PGLYRP4Q96LB8 373 aa12.68□□□□□ -0.38
TRAPPC6A-201ENST00000006275 IBA57-AS1B1ANH7 110 aa12.67□□□□□ -0.38
TRAPPC6A-201ENST00000006275 M0QY20 66 aa12.67□□□□□ -0.38
TRAPPC6A-201ENST00000006275 RPL23P62829 140 aaKnown RBP12.67□□□□□ -0.38
TRAPPC6A-201ENST00000006275 NAT8Q9UHE5 227 aa12.67□□□□□ -0.38
TRAPPC6A-201ENST00000006275 ADIRFQ15847 76 aa12.66□□□□□ -0.38
TRAPPC6A-201ENST00000006275 SMIM15Q7Z3B0 74 aa12.66□□□□□ -0.38
TRAPPC6A-201ENST00000006275 Q8N3U1 123 aa12.66□□□□□ -0.38
TRAPPC6A-201ENST00000006275 TSKUQ8WUA8 353 aa12.66□□□□□ -0.38
TRAPPC6A-201ENST00000006275 ISOC2Q96AB3 205 aa12.66□□□□□ -0.38
TRAPPC6A-201ENST00000006275 BORCS7Q96B45 105 aa12.66□□□□□ -0.38
TRAPPC6A-201ENST00000006275 DNAJC30Q96LL9 226 aa12.66□□□□□ -0.38
TRAPPC6A-201ENST00000006275 FOXA3P55318 350 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC6A-201ENST00000006275 RASL11AQ6T310 242 aa12.65□□□□□ -0.38
TRAPPC6A-201ENST00000006275 DAZ4Q86SG3 579 aaKnown RBP12.65□□□□□ -0.38
TRAPPC6A-201ENST00000006275 NIT1Q86X76 327 aa12.65□□□□□ -0.38
TRAPPC6A-201ENST00000006275 GFRA4Q9GZZ7 299 aa12.65□□□□□ -0.38
TRAPPC6A-201ENST00000006275 Q9HAA7 133 aa12.65□□□□□ -0.38
TRAPPC6A-201ENST00000006275 DAZ3Q9NR90 486 aaKnown RBP12.65□□□□□ -0.38
TRAPPC6A-201ENST00000006275 URGCP-MRPS24S4R325 110 aa12.65□□□□□ -0.38
TRAPPC6A-201ENST00000006275 TRBV6-8A0A0A6YYG3 113 aa12.64□□□□□ -0.39
TRAPPC6A-201ENST00000006275 HIGD1CA8MV81 97 aa12.64□□□□□ -0.39
TRAPPC6A-201ENST00000006275 KCNIP4Q6PIL6 250 aa12.64□□□□□ -0.39
TRAPPC6A-201ENST00000006275 TMEM70Q9BUB7 260 aa12.64□□□□□ -0.39
TRAPPC6A-201ENST00000006275 V9GYV3 84 aa12.64□□□□□ -0.39
TRAPPC6A-201ENST00000006275 FAM231BA6NCW3 169 aa12.63□□□□□ -0.39
TRAPPC6A-201ENST00000006275 TMEM97Q5BJF2 176 aa12.63□□□□□ -0.39
TRAPPC6A-201ENST00000006275 IGLV5-52A0A0A0MRZ9 124 aa12.62□□□□□ -0.39
TRAPPC6A-201ENST00000006275 LAGE3Q14657 143 aa12.62□□□□□ -0.39
TRAPPC6A-201ENST00000006275 NIT2Q9NQR4 276 aa12.62□□□□□ -0.39
TRAPPC6A-201ENST00000006275 UBR4Q5T4S7 5183 aa12.61□□□□□ -0.39
TRAPPC6A-201ENST00000006275 A0A087WX48 190 aa12.61□□□□□ -0.39
TRAPPC6A-201ENST00000006275 A0A1B0GUT8 65 aa12.61□□□□□ -0.39
TRAPPC6A-201ENST00000006275 KRTAP29-1A8MX34 341 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC6A-201ENST00000006275 TMEM262E9PQX1 116 aa12.61□□□□□ -0.39
TRAPPC6A-201ENST00000006275 PSCAO43653 123 aa12.61□□□□□ -0.39
TRAPPC6A-201ENST00000006275 CHCHD7Q9BUK0 85 aa12.61□□□□□ -0.39
TRAPPC6A-201ENST00000006275 NTM-AS1Q6ZSK4 140 aa12.6□□□□□ -0.39
TRAPPC6A-201ENST00000006275 TRAV8-3A0A0A6YYJ7 113 aa12.59□□□□□ -0.39
TRAPPC6A-201ENST00000006275 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
TRAPPC6A-201ENST00000006275 CLLU1Q5K131 121 aa12.59□□□□□ -0.39
TRAPPC6A-201ENST00000006275 SERTAD4-AS1Q5TG53 156 aa12.59□□□□□ -0.39
TRAPPC6A-201ENST00000006275 GATD1Q8NB37 220 aa12.59□□□□□ -0.39
TRAPPC6A-201ENST00000006275 CHCHD5Q9BSY4 110 aa12.59□□□□□ -0.39
TRAPPC6A-201ENST00000006275 TRBV25-1A0A075B6N4 114 aa12.58□□□□□ -0.4
TRAPPC6A-201ENST00000006275 PLA2G1BP04054 148 aaKnown RBP12.58□□□□□ -0.4
TRAPPC6A-201ENST00000006275 ELOBQ15370 118 aa12.58□□□□□ -0.4
TRAPPC6A-201ENST00000006275 NUP35Q8NFH5 326 aa12.58□□□□□ -0.4
TRAPPC6A-201ENST00000006275 TM2D2Q9BX73 214 aa12.58□□□□□ -0.4
TRAPPC6A-201ENST00000006275 NAT8BQ9UHF3 227 aa12.58□□□□□ -0.4
TRAPPC6A-201ENST00000006275 KLK12Q9UKR0 248 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms