RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 UQCC1Q9NVA1 299 aa2.93□□□□□ -1.94
GABRA1-220ENST00000638159 PMS2P5A8MQ11 134 aa2.93□□□□□ -1.94
GABRA1-220ENST00000638159 H3BP45 60 aa2.93□□□□□ -1.94
GABRA1-220ENST00000638159 S100A9P06702 114 aaKnown RBP2.93□□□□□ -1.94
GABRA1-220ENST00000638159 CFC1BP0CG36 223 aa2.93□□□□□ -1.94
GABRA1-220ENST00000638159 RNASE2P10153 161 aaKnown RBP2.93□□□□□ -1.94
GABRA1-220ENST00000638159 BRWD1-AS2P59051 145 aa2.93□□□□□ -1.94
GABRA1-220ENST00000638159 SP6Q3SY56 376 aa2.93□□□□□ -1.94
GABRA1-220ENST00000638159 LYZL1Q6UWQ5 148 aa2.93□□□□□ -1.94
GABRA1-220ENST00000638159 LYZL2Q7Z4W2 148 aa2.93□□□□□ -1.94
GABRA1-220ENST00000638159 OR5A1Q8NGJ0 315 aa2.93□□□□□ -1.94
GABRA1-220ENST00000638159 PRSS46E5RG02 174 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 DEFB1P60022 68 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 HIGD2BQ4VC39 106 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 SAPCD1Q5SSQ6 148 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 TMUB2Q71RG4 321 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 CYTL1Q9NRR1 136 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 A0A0J9YXV3 536 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 PRAC2D3DTV9 90 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 SPINK4O60575 86 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 S100A6P06703 90 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 NMBP08949 121 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 HINT1P49773 126 aaPredicted RBP2.92□□□□□ -1.94
GABRA1-220ENST00000638159 RANP62826 216 aaKnown RBP2.92□□□□□ -1.94
GABRA1-220ENST00000638159 SYCNQ0VAF6 134 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 DNLZQ5SXM8 178 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 ZFP82Q8N141 532 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 TRBV6-4A0A1B0GX49 114 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 FNDC10F2Z333 226 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 UBE2D2P62837 147 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 FAM162BQ5T6X4 162 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 AQP10Q96PS8 301 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 IL36BQ9NZH7 164 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 KLF12Q9Y4X4 402 aa2.92□□□□□ -1.94
GABRA1-220ENST00000638159 IGKV1D-13A0A0B4J2D9 117 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 SYNGR2O43760 224 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 IGKV1-17P01599 117 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 IGKV1-13P0DP09 117 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 ZNF818PQ6ZRF7 136 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 MITD1Q8WV92 249 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 ZNF479Q96JC4 524 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 C12orf57Q99622 126 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 NKX6-2Q9C056 277 aaPredicted RBP2.91□□□□□ -1.94
GABRA1-220ENST00000638159 LSM5Q9Y4Y9 91 aaKnown RBP2.91□□□□□ -1.94
GABRA1-220ENST00000638159 F8W036 122 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 BLOC1S1P78537 153 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 FLI1Q01543 452 aaPredicted RBP2.91□□□□□ -1.94
GABRA1-220ENST00000638159 SHANK2-AS3Q9BTD1 123 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 SAMD10Q9BYL1 202 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 CARHSP1Q9Y2V2 147 aaKnown RBP2.91□□□□□ -1.94
GABRA1-220ENST00000638159 TRGC1P0CF51 173 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 CKS1BP61024 79 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 SMIM8Q96KF7 97 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 ODF3Q96PU9 254 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 ARL2-SNX15V9GYD0 113 aa2.91□□□□□ -1.94
GABRA1-220ENST00000638159 LINC00173Q6ZV60 143 aa2.9□□□□□ -1.94
GABRA1-220ENST00000638159 NIT1Q86X76 327 aa2.9□□□□□ -1.94
GABRA1-220ENST00000638159 SELENOHQ8IZQ5 122 aaKnown RBP2.9□□□□□ -1.94
GABRA1-220ENST00000638159 SVBPQ8N300 66 aa2.9□□□□□ -1.94
GABRA1-220ENST00000638159 OR2D3Q8NGH3 330 aa2.9□□□□□ -1.94
GABRA1-220ENST00000638159 TIMM17AQ99595 171 aa2.9□□□□□ -1.94
GABRA1-220ENST00000638159 IGHV1-58A0A0C4DH39 117 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 FAM74A7A6NL05 159 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 PMCHP20382 165 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 FGF7P21781 194 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 FAM74A3Q4VXF1 159 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 ATRAIDQ6UW56 229 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 RTBDNQ9BSG5 229 aaPredicted RBP2.9□□□□□ -1.95
GABRA1-220ENST00000638159 DERL1Q9BUN8 251 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 NAA60Q9H7X0 242 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 TNFSF18Q9UNG2 199 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 GAGE12HA6NDE8 117 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 APCSP02743 223 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 CD3DP04234 171 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 H2BFSP57053 126 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 GDF5OSQ5U4N7 250 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 COX8CQ7Z4L0 72 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 LINC00518Q8N0U6 118 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 SMDT1Q9H4I9 107 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 BIN3Q9NQY0 253 aa2.9□□□□□ -1.95
GABRA1-220ENST00000638159 ZNF469Q96JG9 3925 aaPredicted RBP2.9□□□□□ -1.95
GABRA1-220ENST00000638159 REG3AQ06141 175 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 UQCC3Q6UW78 93 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 KCNRGQ8N5I3 272 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 AP1S3Q96PC3 154 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 TOMM7Q9P0U1 55 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 ZNF706Q9Y5V0 76 aaPredicted RBP2.89□□□□□ -1.95
GABRA1-220ENST00000638159 TMSB15BA0A087X1C1 80 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 SERTM2A0A1B0GWG4 89 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 GCGP01275 180 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 NBEAP1P0C6P0 100 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 TMEM50BP56557 158 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 GAGE2EQ4V326 116 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 PLAC9Q5JTB6 97 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 CBLN2Q8IUK8 224 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 GATD1Q8NB37 220 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 MRPL36Q9P0J6 103 aaKnown RBP2.89□□□□□ -1.95
GABRA1-220ENST00000638159 GAGE2DQ9UEU5 116 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 TGIF2-C20orf24A0A0A6YYL0 155 aa2.89□□□□□ -1.95
GABRA1-220ENST00000638159 SSSCA1O60232 199 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms