RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 H3BRN7 92 aa8.8□□□□□ -1
LINC00538-201ENST00000626109 NDUFC2O95298 119 aa8.8□□□□□ -1
LINC00538-201ENST00000626109 IGKV1-17P01599 117 aa8.8□□□□□ -1
LINC00538-201ENST00000626109 HLA-DRB1P01911 266 aa8.8□□□□□ -1
LINC00538-201ENST00000626109 C9orf85Q96MD7 179 aa8.8□□□□□ -1
LINC00538-201ENST00000626109 MRPS16Q9Y3D3 137 aaKnown RBP8.8□□□□□ -1
LINC00538-201ENST00000626109 SVEP1Q4LDE5 3571 aa8.79□□□□□ -1
LINC00538-201ENST00000626109 A0A1B0GUT8 65 aa8.79□□□□□ -1
LINC00538-201ENST00000626109 K7EIM0 57 aa8.79□□□□□ -1
LINC00538-201ENST00000626109 CSN1S1P47710 185 aa8.79□□□□□ -1
LINC00538-201ENST00000626109 PDE6HQ13956 83 aa8.79□□□□□ -1
LINC00538-201ENST00000626109 Q56UQ5 140 aa8.79□□□□□ -1
LINC00538-201ENST00000626109 PLEKHB2Q96CS7 222 aa8.79□□□□□ -1
LINC00538-201ENST00000626109 CARD19Q96LW7 228 aa8.79□□□□□ -1
LINC00538-201ENST00000626109 JPT2Q9H910 190 aa8.79□□□□□ -1
LINC00538-201ENST00000626109 A0A087WZ39 114 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 C2orf70A6NJV1 201 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 FAM229AH3BQW9 127 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 LEPROTL1O95214 131 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 IGLV2-11P01706 119 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 BLCAPP62952 87 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 EBLN2Q6P2I7 272 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 Q6ZVQ6 151 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 ZNF491Q8N8L2 437 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 C19orf73Q9NVV2 129 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 WI2-2373I1.2A0A1W2PRP0 233 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 IL4P05112 153 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 PSG9Q00887 426 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 ECSCRQ19T08 205 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 TMEM191AQ9H0A3 160 aa8.78□□□□□ -1
LINC00538-201ENST00000626109 TRAV8-1A0A0A6YYK1 113 aa8.77□□□□□ -1.01
LINC00538-201ENST00000626109 IGHV7-81A0A0B4J1V7 117 aa8.77□□□□□ -1.01
LINC00538-201ENST00000626109 TRAV26-2A0A0B4J265 109 aa8.77□□□□□ -1.01
LINC00538-201ENST00000626109 A0A0U1RQV1 116 aa8.77□□□□□ -1.01
LINC00538-201ENST00000626109 ATP5G1P05496 136 aa8.77□□□□□ -1.01
LINC00538-201ENST00000626109 PIK3CD-AS1Q5SR53 167 aa8.77□□□□□ -1.01
LINC00538-201ENST00000626109 LCN12Q6JVE5 192 aa8.77□□□□□ -1.01
LINC00538-201ENST00000626109 MXRA5Q9NR99 2828 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 IGHG2P01859 326 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 ATOH7Q8N100 152 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 MAPKAPK5-AS1Q8N8E1 139 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 ZNF414Q96IQ9 312 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 ZNF702PQ9H963 129 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 Q9HAA7 133 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 ST20Q9HBF5 79 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 TRAV8-4A0A0B4J246 113 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 IGHV1-24A0A0C4DH33 117 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 SYS1-DBNDD2H3BUS1 97 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 NDPQ00604 133 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 Q6ZSV7 163 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 TTC9CQ8N5M4 171 aa8.76□□□□□ -1.01
LINC00538-201ENST00000626109 ATP6V0E1O15342 81 aa8.75□□□□□ -1.01
LINC00538-201ENST00000626109 Q8N2B8 174 aa8.75□□□□□ -1.01
LINC00538-201ENST00000626109 ZC2HC1AQ96GY0 325 aa8.75□□□□□ -1.01
LINC00538-201ENST00000626109 URB1-AS1Q96HZ7 61 aa8.75□□□□□ -1.01
LINC00538-201ENST00000626109 TEP1Q99973 2627 aaKnown RBP8.75□□□□□ -1.01
LINC00538-201ENST00000626109 IGLV11-55A0A075B6I3 123 aa8.74□□□□□ -1.01
LINC00538-201ENST00000626109 IGLL1P15814 213 aa8.74□□□□□ -1.01
LINC00538-201ENST00000626109 C8orf87E5RJ46 101 aa8.74□□□□□ -1.01
LINC00538-201ENST00000626109 J3QR89 54 aa8.74□□□□□ -1.01
LINC00538-201ENST00000626109 LYRM7Q5U5X0 104 aa8.74□□□□□ -1.01
LINC00538-201ENST00000626109 C17orf77Q96MU5 243 aa8.74□□□□□ -1.01
LINC00538-201ENST00000626109 C21orf62Q9NYP8 219 aa8.74□□□□□ -1.01
LINC00538-201ENST00000626109 LINC01548A6NM66 108 aa8.73□□□□□ -1.01
LINC00538-201ENST00000626109 IGLC6P0CF74 106 aa8.73□□□□□ -1.01
LINC00538-201ENST00000626109 PRSS3P2Q8NHM4 247 aa8.73□□□□□ -1.01
LINC00538-201ENST00000626109 C16orf95Q9H693 158 aa8.73□□□□□ -1.01
LINC00538-201ENST00000626109 ZNF580Q9UK33 172 aa8.73□□□□□ -1.01
LINC00538-201ENST00000626109 TRAV41A0A0B4J266 112 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 A0A1B0GWB2 263 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 ARMS2P0C7Q2 107 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 CRIP2P52943 208 aaPredicted RBP8.72□□□□□ -1.01
LINC00538-201ENST00000626109 UNQ5815/PRO19632Q6UWF5 114 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 ZNF493Q6ZR52 646 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 PRIMA1Q86XR5 153 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.72□□□□□ -1.01
LINC00538-201ENST00000626109 LINC00482Q8N8I6 264 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 LINC00527Q9UJ94 153 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 EGR2P11161 476 aaPredicted RBP8.72□□□□□ -1.01
LINC00538-201ENST00000626109 CACNG7P62955 275 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 Q5XG85 94 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 DEFB125Q8N687 156 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 STPG4Q8N801 248 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 OR10AG1Q8NH19 301 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 LINC01006Q8NI28 216 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 AP1S3Q96PC3 154 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 RABAC1Q9UI14 185 aa8.72□□□□□ -1.01
LINC00538-201ENST00000626109 G3V318 75 aa8.71□□□□□ -1.02
LINC00538-201ENST00000626109 HINT1P49773 126 aaPredicted RBP8.71□□□□□ -1.02
LINC00538-201ENST00000626109 MEIG1Q5JSS6 88 aa8.71□□□□□ -1.02
LINC00538-201ENST00000626109 FAM19A4Q96LR4 140 aa8.71□□□□□ -1.02
LINC00538-201ENST00000626109 hDV102S1A0JD36 115 aa8.7□□□□□ -1.02
LINC00538-201ENST00000626109 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
LINC00538-201ENST00000626109 SLC25A34Q6PIV7 304 aa8.7□□□□□ -1.02
LINC00538-201ENST00000626109 SPATA12Q7Z6I5 190 aa8.7□□□□□ -1.02
LINC00538-201ENST00000626109 ANKRD29Q8N6D5 301 aa8.7□□□□□ -1.02
LINC00538-201ENST00000626109 PMCHL2Q9BQD1 86 aa8.7□□□□□ -1.02
LINC00538-201ENST00000626109 CYSLTR1Q9Y271 337 aa8.7□□□□□ -1.02
LINC00538-201ENST00000626109 CLPSL1A2RUU4 121 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms