RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 BTN1A1Q13410 526 aa9□□□□□ -0.97
SNX1-214ENST00000625244 LAGE3Q14657 143 aa9□□□□□ -0.97
SNX1-214ENST00000625244 IBA57Q5T440 356 aaKnown RBP9□□□□□ -0.97
SNX1-214ENST00000625244 TEX261Q6UWH6 196 aa9□□□□□ -0.97
SNX1-214ENST00000625244 ZFAND2AQ8N6M9 145 aa9□□□□□ -0.97
SNX1-214ENST00000625244 SGK494Q96LW2 274 aa9□□□□□ -0.97
SNX1-214ENST00000625244 C9JCJ5 164 aa8.99□□□□□ -0.97
SNX1-214ENST00000625244 PDE6DO43924 150 aa8.99□□□□□ -0.97
SNX1-214ENST00000625244 BCL2P10415 239 aa8.99□□□□□ -0.97
SNX1-214ENST00000625244 CCL20P78556 96 aa8.99□□□□□ -0.97
SNX1-214ENST00000625244 MEF2BQ02080 365 aaPredicted RBP8.99□□□□□ -0.97
SNX1-214ENST00000625244 SMUG1Q53HV7 270 aa8.99□□□□□ -0.97
SNX1-214ENST00000625244 VAX2Q9UIW0 290 aa8.99□□□□□ -0.97
SNX1-214ENST00000625244 TRAV8-6A0A0B4J262 113 aa8.98□□□□□ -0.97
SNX1-214ENST00000625244 TRAV34A0A0B4J273 112 aa8.98□□□□□ -0.97
SNX1-214ENST00000625244 TRAV21A0A0B4J279 112 aa8.98□□□□□ -0.97
SNX1-214ENST00000625244 SCO2A0A1W2PP80 73 aa8.98□□□□□ -0.97
SNX1-214ENST00000625244 OR10J3Q5JRS4 329 aa8.98□□□□□ -0.97
SNX1-214ENST00000625244 FAM159AQ6UWV7 190 aa8.98□□□□□ -0.97
SNX1-214ENST00000625244 Q6ZQT7 251 aa8.98□□□□□ -0.97
SNX1-214ENST00000625244 Q86TA4 180 aa8.98□□□□□ -0.97
SNX1-214ENST00000625244 Q8N3U1 123 aa8.98□□□□□ -0.97
SNX1-214ENST00000625244 ZFP30Q9Y2G7 519 aa8.98□□□□□ -0.97
SNX1-214ENST00000625244 IGHV1OR15-1A0A075B7D0 117 aa8.97□□□□□ -0.97
SNX1-214ENST00000625244 RAB14P61106 215 aa8.97□□□□□ -0.97
SNX1-214ENST00000625244 TMEM183BQ1AE95 376 aa8.97□□□□□ -0.97
SNX1-214ENST00000625244 Q6AWC8 147 aa8.97□□□□□ -0.97
SNX1-214ENST00000625244 Q8N976 141 aa8.97□□□□□ -0.97
SNX1-214ENST00000625244 NHLRC2Q8NBF2 726 aa8.97□□□□□ -0.97
SNX1-214ENST00000625244 LINC00479Q96M42 142 aa8.97□□□□□ -0.97
SNX1-214ENST00000625244 NAGKQ9UJ70 344 aa8.97□□□□□ -0.97
SNX1-214ENST00000625244 GCGP01275 180 aa8.96□□□□□ -0.98
SNX1-214ENST00000625244 PRR9Q5T870 116 aa8.96□□□□□ -0.98
SNX1-214ENST00000625244 SH2D6Q7Z4S9 175 aa8.96□□□□□ -0.98
SNX1-214ENST00000625244 EIF5A2Q9GZV4 153 aaKnown RBP8.96□□□□□ -0.98
SNX1-214ENST00000625244 TRGV11A0A075B6L2 103 aa8.95□□□□□ -0.98
SNX1-214ENST00000625244 TRAV8-3A0A0A6YYJ7 113 aa8.95□□□□□ -0.98
SNX1-214ENST00000625244 TRBV6-1A0A0K0K1D8 114 aa8.95□□□□□ -0.98
SNX1-214ENST00000625244 PFN1P07737 140 aaKnown RBP8.95□□□□□ -0.98
SNX1-214ENST00000625244 MUC21Q5SSG8 566 aa8.95□□□□□ -0.98
SNX1-214ENST00000625244 LYPD6BQ8NI32 183 aa8.95□□□□□ -0.98
SNX1-214ENST00000625244 C11orf52Q96A22 123 aa8.95□□□□□ -0.98
SNX1-214ENST00000625244 TVP23CQ96ET8 276 aa8.95□□□□□ -0.98
SNX1-214ENST00000625244 KCNS1Q96KK3 526 aa8.95□□□□□ -0.98
SNX1-214ENST00000625244 MED9Q9NWA0 146 aa8.95□□□□□ -0.98
SNX1-214ENST00000625244 BAGE2Q86Y30 109 aa8.94□□□□□ -0.98
SNX1-214ENST00000625244 SDF2L1Q9HCN8 221 aa8.94□□□□□ -0.98
SNX1-214ENST00000625244 FABP5P3A8MUU1 101 aa8.93□□□□□ -0.98
SNX1-214ENST00000625244 LTAP01374 205 aa8.93□□□□□ -0.98
SNX1-214ENST00000625244 RPL35P42766 123 aaKnown RBP8.93□□□□□ -0.98
SNX1-214ENST00000625244 TOR2AQ5JU69 321 aa8.93□□□□□ -0.98
SNX1-214ENST00000625244 LINC01600Q96MT4 127 aa8.93□□□□□ -0.98
SNX1-214ENST00000625244 GNG4P50150 75 aa8.92□□□□□ -0.98
SNX1-214ENST00000625244 ZNF506Q5JVG8 444 aa8.92□□□□□ -0.98
SNX1-214ENST00000625244 FAM162BQ5T6X4 162 aa8.92□□□□□ -0.98
SNX1-214ENST00000625244 TMEM183AQ8IXX5 376 aa8.92□□□□□ -0.98
SNX1-214ENST00000625244 ATP6V0E2Q8NHE4 81 aa8.92□□□□□ -0.98
SNX1-214ENST00000625244 RASL10AQ92737 203 aa8.92□□□□□ -0.98
SNX1-214ENST00000625244 FAM210AQ96ND0 272 aa8.92□□□□□ -0.98
SNX1-214ENST00000625244 DPH3P1Q9H4G8 78 aa8.92□□□□□ -0.98
SNX1-214ENST00000625244 TMEM250H0YL14 139 aa8.91□□□□□ -0.98
SNX1-214ENST00000625244 CEBPGP53567 150 aa8.91□□□□□ -0.98
SNX1-214ENST00000625244 CENPWQ5EE01 88 aa8.91□□□□□ -0.98
SNX1-214ENST00000625244 COX8CQ7Z4L0 72 aa8.91□□□□□ -0.98
SNX1-214ENST00000625244 DAZ4Q86SG3 579 aaKnown RBP8.91□□□□□ -0.98
SNX1-214ENST00000625244 SMIM12Q96EX1 92 aa8.91□□□□□ -0.98
SNX1-214ENST00000625244 ZC2HC1AQ96GY0 325 aa8.91□□□□□ -0.98
SNX1-214ENST00000625244 DNAJC30Q96LL9 226 aa8.91□□□□□ -0.98
SNX1-214ENST00000625244 BIN3Q9NQY0 253 aa8.91□□□□□ -0.98
SNX1-214ENST00000625244 DAZ3Q9NR90 486 aaKnown RBP8.91□□□□□ -0.98
SNX1-214ENST00000625244 TRAV4A0A0B4J268 109 aa8.9□□□□□ -0.98
SNX1-214ENST00000625244 IGHV3-16A0A0C4DH30 117 aa8.9□□□□□ -0.98
SNX1-214ENST00000625244 PANO1I0J062 215 aa8.9□□□□□ -0.98
SNX1-214ENST00000625244 MGST1P10620 155 aaKnown RBP8.9□□□□□ -0.98
SNX1-214ENST00000625244 S100A4P26447 101 aaKnown RBP8.9□□□□□ -0.98
SNX1-214ENST00000625244 ZNF80P51504 273 aaPredicted RBP8.9□□□□□ -0.98
SNX1-214ENST00000625244 ZNF674Q2M3X9 581 aa8.9□□□□□ -0.98
SNX1-214ENST00000625244 PRR27Q6MZM9 219 aa8.9□□□□□ -0.98
SNX1-214ENST00000625244 COX11Q9Y6N1 276 aa8.9□□□□□ -0.98
SNX1-214ENST00000625244 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.9□□□□□ -0.98
SNX1-214ENST00000625244 SH2D1AO60880 128 aa8.89□□□□□ -0.99
SNX1-214ENST00000625244 NDUFS6O75380 124 aaKnown RBP8.89□□□□□ -0.99
SNX1-214ENST00000625244 PEA15Q15121 130 aa8.89□□□□□ -0.99
SNX1-214ENST00000625244 OR4C5Q8NGB2 326 aa8.89□□□□□ -0.99
SNX1-214ENST00000625244 SPXQ9BT56 116 aa8.89□□□□□ -0.99
SNX1-214ENST00000625244 DERL1Q9BUN8 251 aa8.89□□□□□ -0.99
SNX1-214ENST00000625244 B4DEV8 164 aa8.88□□□□□ -0.99
SNX1-214ENST00000625244 TYMSP04818 313 aa8.88□□□□□ -0.99
SNX1-214ENST00000625244 GATA1P15976 413 aaPredicted RBP8.88□□□□□ -0.99
SNX1-214ENST00000625244 PARLQ9H300 379 aa8.88□□□□□ -0.99
SNX1-214ENST00000625244 IGKV2D-24A0A075B6R9 120 aa8.87□□□□□ -0.99
SNX1-214ENST00000625244 RAB19A4D1S5 217 aa8.87□□□□□ -0.99
SNX1-214ENST00000625244 M0R036 132 aa8.87□□□□□ -0.99
SNX1-214ENST00000625244 GNRH2O43555 120 aa8.87□□□□□ -0.99
SNX1-214ENST00000625244 MLST8Q9BVC4 326 aa8.87□□□□□ -0.99
SNX1-214ENST00000625244 GTSF1LQ9H1H1 148 aa8.87□□□□□ -0.99
SNX1-214ENST00000625244 SMDT1Q9H4I9 107 aa8.87□□□□□ -0.99
SNX1-214ENST00000625244 FSIP2Q5CZC0 6907 aa8.87□□□□□ -0.99
SNX1-214ENST00000625244 M0R2P5 195 aa8.86□□□□□ -0.99
SNX1-214ENST00000625244 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms