RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 IGLL1P15814 213 aa15.62■□□□□ 0.09
SPAST-204ENST00000621856 WFDC9Q8NEX5 89 aa15.62■□□□□ 0.09
SPAST-204ENST00000621856 C1QTNF4Q9BXJ3 329 aa15.62■□□□□ 0.09
SPAST-204ENST00000621856 NXT2Q9NPJ8 142 aaKnown RBP15.62■□□□□ 0.09
SPAST-204ENST00000621856 GOLT1BQ9Y3E0 138 aa15.62■□□□□ 0.09
SPAST-204ENST00000621856 M0R2P5 195 aa15.61■□□□□ 0.09
SPAST-204ENST00000621856 FAM74A4Q5TZK3 123 aa15.61■□□□□ 0.09
SPAST-204ENST00000621856 POM121L12Q8N7R1 296 aa15.61■□□□□ 0.09
SPAST-204ENST00000621856 F5H697 171 aa15.6■□□□□ 0.09
SPAST-204ENST00000621856 GIG44P09565 113 aaPredicted RBP15.6■□□□□ 0.09
SPAST-204ENST00000621856 LINC00315P59091 139 aa15.6■□□□□ 0.09
SPAST-204ENST00000621856 LEPROTL1O95214 131 aa15.6■□□□□ 0.09
SPAST-204ENST00000621856 C11orf72Q8NBR9 251 aa15.6■□□□□ 0.09
SPAST-204ENST00000621856 RASL10AQ92737 203 aa15.6■□□□□ 0.09
SPAST-204ENST00000621856 C3orf79P0CE67 100 aa15.59■□□□□ 0.09
SPAST-204ENST00000621856 AZU1P20160 251 aa15.59■□□□□ 0.09
SPAST-204ENST00000621856 C12orf54Q6X4T0 127 aa15.59■□□□□ 0.09
SPAST-204ENST00000621856 Q8N8P6 123 aa15.59■□□□□ 0.09
SPAST-204ENST00000621856 SPXQ9BT56 116 aa15.59■□□□□ 0.09
SPAST-204ENST00000621856 ZNF56Q15929 161 aa15.58■□□□□ 0.08
SPAST-204ENST00000621856 SUMO4Q6EEV6 95 aa15.58■□□□□ 0.08
SPAST-204ENST00000621856 RPL39LQ96EH5 51 aaKnown RBP15.58■□□□□ 0.08
SPAST-204ENST00000621856 PRSS47A8MTI9 375 aa15.57■□□□□ 0.08
SPAST-204ENST00000621856 PPP1R17O96001 155 aa15.57■□□□□ 0.08
SPAST-204ENST00000621856 CRYGDP07320 174 aa15.57■□□□□ 0.08
SPAST-204ENST00000621856 SHISA2Q6UWI4 295 aa15.57■□□□□ 0.08
SPAST-204ENST00000621856 PTH2Q96A98 100 aa15.57■□□□□ 0.08
SPAST-204ENST00000621856 HSPB8Q9UJY1 196 aa15.56■□□□□ 0.08
SPAST-204ENST00000621856 PCP4L1A6NKN8 68 aa15.55■□□□□ 0.08
SPAST-204ENST00000621856 SUMO2P61956 95 aaKnown RBP15.55■□□□□ 0.08
SPAST-204ENST00000621856 PIK3CD-AS1Q5SR53 167 aa15.55■□□□□ 0.08
SPAST-204ENST00000621856 LINC00173Q6ZV60 143 aa15.55■□□□□ 0.08
SPAST-204ENST00000621856 TMEM158Q8WZ71 300 aa15.55■□□□□ 0.08
SPAST-204ENST00000621856 C20orf78Q9BR46 151 aa15.55■□□□□ 0.08
SPAST-204ENST00000621856 SMIM2Q9BVW6 85 aa15.55■□□□□ 0.08
SPAST-204ENST00000621856 VWFP04275 2813 aa15.55■□□□□ 0.08
SPAST-204ENST00000621856 IGLV2-18A0A075B6J9 118 aa15.54■□□□□ 0.08
SPAST-204ENST00000621856 LINC01546A6NGU7 62 aa15.54■□□□□ 0.08
SPAST-204ENST00000621856 A8MWV9 139 aa15.54■□□□□ 0.08
SPAST-204ENST00000621856 HBDP02042 147 aa15.54■□□□□ 0.08
SPAST-204ENST00000621856 BTF3P20290 206 aaKnown RBP15.54■□□□□ 0.08
SPAST-204ENST00000621856 S100A12P80511 92 aa15.54■□□□□ 0.08
SPAST-204ENST00000621856 CSTL1Q9H114 145 aa15.54■□□□□ 0.08
SPAST-204ENST00000621856 MRPL16Q9NX20 251 aaKnown RBP15.54■□□□□ 0.08
SPAST-204ENST00000621856 TMEM263Q8WUH6 116 aaKnown RBP15.54■□□□□ 0.08
SPAST-204ENST00000621856 NOTCH3Q9UM47 2321 aa15.54■□□□□ 0.08
SPAST-204ENST00000621856 A0A096LNJ9 63 aa15.53■□□□□ 0.08
SPAST-204ENST00000621856 CSNK1G2-AS1Q8NCQ2 148 aa15.53■□□□□ 0.08
SPAST-204ENST00000621856 RNASE8Q8TDE3 154 aaKnown RBP15.53■□□□□ 0.08
SPAST-204ENST00000621856 TMEM70Q9BUB7 260 aa15.52■□□□□ 0.08
SPAST-204ENST00000621856 ST20Q9HBF5 79 aa15.52■□□□□ 0.08
SPAST-204ENST00000621856 WIPF1O43516 503 aa15.51■□□□□ 0.07
SPAST-204ENST00000621856 Q8N976 141 aa15.51■□□□□ 0.07
SPAST-204ENST00000621856 MAP1LC3CQ9BXW4 147 aa15.51■□□□□ 0.07
SPAST-204ENST00000621856 TCAPO15273 167 aa15.51■□□□□ 0.07
SPAST-204ENST00000621856 LAGE3Q14657 143 aa15.51■□□□□ 0.07
SPAST-204ENST00000621856 IL17DQ8TAD2 202 aa15.51■□□□□ 0.07
SPAST-204ENST00000621856 IGHV3-73A0A0B4J1V6 119 aa15.5■□□□□ 0.07
SPAST-204ENST00000621856 FCER1GP30273 86 aa15.5■□□□□ 0.07
SPAST-204ENST00000621856 C16orf74Q96GX8 76 aa15.5■□□□□ 0.07
SPAST-204ENST00000621856 RRN3P1Q2M238 152 aa15.49■□□□□ 0.07
SPAST-204ENST00000621856 ZNF705AQ6ZN79 300 aaPredicted RBP15.49■□□□□ 0.07
SPAST-204ENST00000621856 TRGV1A0A0A0MS02 117 aa15.48■□□□□ 0.07
SPAST-204ENST00000621856 SYS1-DBNDD2H3BUS1 97 aa15.48■□□□□ 0.07
SPAST-204ENST00000621856 M0QY20 66 aa15.48■□□□□ 0.07
SPAST-204ENST00000621856 CFAP126Q5VTH2 177 aa15.48■□□□□ 0.07
SPAST-204ENST00000621856 NDUFAF3Q9BU61 184 aa15.48■□□□□ 0.07
SPAST-204ENST00000621856 H7C1H1 209 aa15.47■□□□□ 0.07
SPAST-204ENST00000621856 RHODO00212 210 aa15.47■□□□□ 0.07
SPAST-204ENST00000621856 RS1O15537 224 aa15.47■□□□□ 0.07
SPAST-204ENST00000621856 H0Y8G0 127 aa15.46■□□□□ 0.07
SPAST-204ENST00000621856 TEX43Q6ZNM6 134 aa15.46■□□□□ 0.07
SPAST-204ENST00000621856 TRBV6-5A0A0K0K1A5 114 aa15.46■□□□□ 0.06
SPAST-204ENST00000621856 C20orf202A1L168 122 aa15.46■□□□□ 0.06
SPAST-204ENST00000621856 NACAE9PAV3 2078 aa15.46■□□□□ 0.06
SPAST-204ENST00000621856 NUDT3O95989 172 aa15.46■□□□□ 0.06
SPAST-204ENST00000621856 RPL32P62910 135 aaKnown RBP15.46■□□□□ 0.06
SPAST-204ENST00000621856 ORMDL2Q53FV1 153 aa15.46■□□□□ 0.06
SPAST-204ENST00000621856 UFSP1Q6NVU6 142 aa15.46■□□□□ 0.06
SPAST-204ENST00000621856 NEGR1Q7Z3B1 354 aa15.46■□□□□ 0.06
SPAST-204ENST00000621856 SPATA12Q7Z6I5 190 aa15.46■□□□□ 0.06
SPAST-204ENST00000621856 NOP10Q9NPE3 64 aaKnown RBP15.46■□□□□ 0.06
SPAST-204ENST00000621856 FBN1P35555 2871 aaKnown RBP15.45■□□□□ 0.06
SPAST-204ENST00000621856 K7EMI3 77 aa15.45■□□□□ 0.06
SPAST-204ENST00000621856 OXLD1Q5BKU9 147 aa15.45■□□□□ 0.06
SPAST-204ENST00000621856 PET117Q6UWS5 81 aa15.45■□□□□ 0.06
SPAST-204ENST00000621856 SDHAF1A6NFY7 115 aa15.44■□□□□ 0.06
SPAST-204ENST00000621856 VCYO14598 125 aa15.44■□□□□ 0.06
SPAST-204ENST00000621856 POLR2KP53803 58 aaKnown RBP15.44■□□□□ 0.06
SPAST-204ENST00000621856 APOC4P55056 127 aa15.44■□□□□ 0.06
SPAST-204ENST00000621856 DAZ2Q13117 558 aaKnown RBP15.44■□□□□ 0.06
SPAST-204ENST00000621856 Q6ZTI0 123 aa15.44■□□□□ 0.06
SPAST-204ENST00000621856 LGALS9BQ3B8N2 356 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 OR4C5Q8NGB2 326 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 IFI27L1Q96BM0 104 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 C18orf15Q96N68 181 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 VAMP8Q9BV40 100 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 PRO1933Q9H354 126 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 EDA2RQ9HAV5 297 aa15.43■□□□□ 0.06
SPAST-204ENST00000621856 KIR2DL5BA0A0G2JN68 375 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms