RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ELANEP08246 267 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 C15orf32Q32M92 178 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 CLEC2BQ92478 149 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 DPH3P1Q9H4G8 78 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 TRGV11A0A075B6L2 103 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 LOC107984640A0A0U1RRK4 108 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 RBAKDNA6NC62 111 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 GNRH2O43555 120 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 IGHV3-30P01768 117 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 IGHV3-30-5P0DP03 117 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 TSPEAR-AS2P59090 65 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 KLRB1Q12918 225 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 LINC00527Q9UJ94 153 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 A0A0G2JNJ9 132 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 HTN1P15515 57 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 IGFL3Q6UXB1 125 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 LINC01560Q8TB33 94 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 Q9UFV3 132 aa7.47□□□□□ -1.21
TNFAIP3-210ENST00000620204 BRI3O95415 125 aa7.46□□□□□ -1.21
TNFAIP3-210ENST00000620204 EDA2RQ9HAV5 297 aa7.46□□□□□ -1.21
TNFAIP3-210ENST00000620204 SPENQ96T58 3664 aaKnown RBP7.46□□□□□ -1.22
TNFAIP3-210ENST00000620204 IGKV3-20P01619 116 aa7.46□□□□□ -1.22
TNFAIP3-210ENST00000620204 IGHV3-33P01772 117 aa7.46□□□□□ -1.22
TNFAIP3-210ENST00000620204 CTSGP08311 255 aa7.46□□□□□ -1.22
TNFAIP3-210ENST00000620204 FANCD2OSQ96PS1 177 aa7.46□□□□□ -1.22
TNFAIP3-210ENST00000620204 JPT2Q9H910 190 aa7.46□□□□□ -1.22
TNFAIP3-210ENST00000620204 DPM3Q9P2X0 92 aa7.46□□□□□ -1.22
TNFAIP3-210ENST00000620204 MAP1AP78559 2803 aaPredicted RBP7.46□□□□□ -1.22
TNFAIP3-210ENST00000620204 Q8NA96 180 aa7.46□□□□□ -1.22
TNFAIP3-210ENST00000620204 KLK5Q9Y337 293 aaPredicted RBP7.46□□□□□ -1.22
TNFAIP3-210ENST00000620204 OOSP1A8MZH6 123 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 LINC00694P0DN24 101 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 PAPPA-AS1Q5QFB9 102 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 SLC25A29Q8N8R3 303 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 EEF1AKMT3Q96AZ1 226 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 VPREB3Q9UKI3 123 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 CRYGBP07316 175 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 Q6ZSV7 163 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 RNASE6Q93091 150 aaKnown RBP7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 DUX5Q96PT3 197 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 METTL26Q96S19 204 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 WNK1Q9H4A3 2382 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 PRRC2AP48634 2157 aaKnown RBP7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 CENPEQ02224 2701 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 F6UB75 175 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 IGHG4P01861 327 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 ZNF22P17026 224 aaPredicted RBP7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 UCNP55089 124 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 RNASE13Q5GAN3 156 aaKnown RBP7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 ODF3Q96PU9 254 aa7.45□□□□□ -1.22
TNFAIP3-210ENST00000620204 MBD3L4A6NDZ8 208 aaPredicted RBP7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 MBD3L3A6NE82 208 aaPredicted RBP7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 MBD3L5A6NJ08 208 aaPredicted RBP7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 MBD3L2Q8NHZ7 208 aaPredicted RBP7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 TMEM101Q96IK0 257 aa7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 IGHV7-4-1A0A0J9YVY3 117 aa7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 TNFRSF13BO14836 293 aaPredicted RBP7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 CNFNQ9BYD5 112 aa7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 CENPVL3A0A0U1RRI6 287 aa7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 M0R2P5 195 aa7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 IGLV1-47P01700 117 aa7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 TNFRSF18Q9Y5U5 241 aa7.44□□□□□ -1.22
TNFAIP3-210ENST00000620204 DAND5Q8N907 189 aa7.43□□□□□ -1.22
TNFAIP3-210ENST00000620204 TRAV41A0A0B4J266 112 aa7.43□□□□□ -1.22
TNFAIP3-210ENST00000620204 SDHAF1A6NFY7 115 aa7.43□□□□□ -1.22
TNFAIP3-210ENST00000620204 TRIAP1O43715 76 aa7.43□□□□□ -1.22
TNFAIP3-210ENST00000620204 CD3EP07766 207 aa7.43□□□□□ -1.22
TNFAIP3-210ENST00000620204 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
TNFAIP3-210ENST00000620204 TRBV10-2A0A0K0K1G8 114 aa7.43□□□□□ -1.22
TNFAIP3-210ENST00000620204 UBE2E1P51965 193 aa7.43□□□□□ -1.22
TNFAIP3-210ENST00000620204 ZNF580Q9UK33 172 aa7.43□□□□□ -1.22
TNFAIP3-210ENST00000620204 LRRK2Q5S007 2527 aa7.43□□□□□ -1.22
TNFAIP3-210ENST00000620204 IGLV11-55A0A075B6I3 123 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 LINC01619G3V211 115 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 GRNP28799 593 aaKnown RBP7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 ZNF625Q96I27 306 aaPredicted RBP7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 G3V318 75 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 LGALS9O00182 355 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 COX6B1P14854 86 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 PRR9Q5T870 116 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 ZNRF2Q8NHG8 242 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 LINC00477Q96M19 166 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 TRAV21A0A0B4J279 112 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 BUB3O43684 328 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 THBDP07204 575 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 ZNF575Q86XF7 245 aa7.42□□□□□ -1.22
TNFAIP3-210ENST00000620204 CEMP1Q6PRD7 247 aaPredicted RBP7.41□□□□□ -1.22
TNFAIP3-210ENST00000620204 CRYGDP07320 174 aa7.41□□□□□ -1.22
TNFAIP3-210ENST00000620204 ZNF462Q96JM2 2506 aa7.4□□□□□ -1.22
TNFAIP3-210ENST00000620204 VCYO14598 125 aa7.4□□□□□ -1.22
TNFAIP3-210ENST00000620204 PTPN13Q12923 2485 aa7.4□□□□□ -1.22
TNFAIP3-210ENST00000620204 IGHV3-73A0A0B4J1V6 119 aa7.4□□□□□ -1.22
TNFAIP3-210ENST00000620204 IGLV4-69A0A075B6H9 119 aa7.4□□□□□ -1.23
TNFAIP3-210ENST00000620204 LINC01546A6NGU7 62 aa7.4□□□□□ -1.23
TNFAIP3-210ENST00000620204 TMEM126AQ9H061 195 aa7.4□□□□□ -1.23
TNFAIP3-210ENST00000620204 ICOSQ9Y6W8 199 aa7.4□□□□□ -1.23
TNFAIP3-210ENST00000620204 A8MZ25 164 aa7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 F8W735 103 aaPredicted RBP7.39□□□□□ -1.23
TNFAIP3-210ENST00000620204 NPFFO15130 113 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms