RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 RPL11P62913 178 aaKnown RBP11.02□□□□□ -0.64
CDH1-213ENST00000612417 POM121L12Q8N7R1 296 aa11.02□□□□□ -0.64
CDH1-213ENST00000612417 AP1S3Q96PC3 154 aa11.02□□□□□ -0.64
CDH1-213ENST00000612417 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.65
CDH1-213ENST00000612417 RNASE3P12724 160 aaKnown RBP11.02□□□□□ -0.65
CDH1-213ENST00000612417 RNASE4P34096 147 aaKnown RBP11.02□□□□□ -0.65
CDH1-213ENST00000612417 TM4SF20Q53R12 229 aa11.02□□□□□ -0.65
CDH1-213ENST00000612417 GTSCR1Q86UQ5 136 aa11.02□□□□□ -0.65
CDH1-213ENST00000612417 TMEM86BQ8N661 226 aa11.02□□□□□ -0.65
CDH1-213ENST00000612417 TOMM6Q96B49 74 aa11.02□□□□□ -0.65
CDH1-213ENST00000612417 MUC4Q99102 2169 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 TRBV25-1A0A075B6N4 114 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 TMEM89A2RUT3 159 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 KLLNB2CW77 178 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 F6UB75 175 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 PPP1R17O96001 155 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 GTF2H5Q6ZYL4 71 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 JMJD8Q96S16 334 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 CHAC1Q9BUX1 264 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 TMEM160Q9NX00 188 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 MTORP42345 2549 aa11.01□□□□□ -0.65
CDH1-213ENST00000612417 GAGE10A6NGK3 116 aa11□□□□□ -0.65
CDH1-213ENST00000612417 DNAJC9-AS1A6NH13 148 aa11□□□□□ -0.65
CDH1-213ENST00000612417 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
CDH1-213ENST00000612417 F8VRH5 84 aa11□□□□□ -0.65
CDH1-213ENST00000612417 AZU1P20160 251 aa11□□□□□ -0.65
CDH1-213ENST00000612417 TTTY13Q9BZ97 58 aa11□□□□□ -0.65
CDH1-213ENST00000612417 H3BUT2 72 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 H7C1H1 209 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 DCANP1Q8TF63 244 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 RPL39LQ96EH5 51 aaKnown RBP10.99□□□□□ -0.65
CDH1-213ENST00000612417 SMR3AQ99954 134 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 NF1P21359 2839 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 K7EP34 96 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 GNRH2O43555 120 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 ELANEP08246 267 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 ID1P41134 155 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 SHISA2Q6UWI4 295 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 NEGR1Q7Z3B1 354 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 TM2D2Q9BX73 214 aa10.99□□□□□ -0.65
CDH1-213ENST00000612417 RPL32P62910 135 aaKnown RBP10.98□□□□□ -0.65
CDH1-213ENST00000612417 Q8N2B8 174 aa10.98□□□□□ -0.65
CDH1-213ENST00000612417 KIF25-AS1Q9Y6Z4 181 aa10.98□□□□□ -0.65
CDH1-213ENST00000612417 HIVEP2P31629 2446 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 IGKV3-7A0A075B6H7 116 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 OR11H12B2RN74 326 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 SPRY2O43597 315 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 FXYD2P54710 66 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 NEXN-AS1Q8NBZ9 246 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 OR11H1Q8NG94 326 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 OR11H2Q8NH07 326 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 SCGB3A1Q96QR1 104 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 FAM110AQ9BQ89 295 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 IGHV4OR15-8A0A075B7B6 117 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 A0A087WW49 117 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 A0A1W2PPM0 123 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 SMIM13P0DJ93 91 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 GCSHP23434 173 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 LINC00315P59091 139 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 TAL2Q16559 108 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 ODF3Q96PU9 254 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 ESM1Q9NQ30 184 aa10.97□□□□□ -0.65
CDH1-213ENST00000612417 TSPAN13O95857 204 aa10.96□□□□□ -0.65
CDH1-213ENST00000612417 MGPP08493 103 aa10.96□□□□□ -0.65
CDH1-213ENST00000612417 CEND1Q8N111 149 aa10.96□□□□□ -0.65
CDH1-213ENST00000612417 SRD5A1P18405 259 aa10.96□□□□□ -0.66
CDH1-213ENST00000612417 C2orf66Q6UXQ4 117 aa10.96□□□□□ -0.66
CDH1-213ENST00000612417 OR5A1Q8NGJ0 315 aa10.96□□□□□ -0.66
CDH1-213ENST00000612417 OTOGQ6ZRI0 2925 aa10.95□□□□□ -0.66
CDH1-213ENST00000612417 EDN2P20800 178 aa10.95□□□□□ -0.66
CDH1-213ENST00000612417 FAM159AQ6UWV7 190 aa10.95□□□□□ -0.66
CDH1-213ENST00000612417 Q6ZSV7 163 aa10.95□□□□□ -0.66
CDH1-213ENST00000612417 MAPKAPK5-AS1Q8N8E1 139 aa10.95□□□□□ -0.66
CDH1-213ENST00000612417 PHLDA1Q8WV24 401 aaPredicted RBP10.95□□□□□ -0.66
CDH1-213ENST00000612417 RAB37Q96AX2 223 aa10.95□□□□□ -0.66
CDH1-213ENST00000612417 LINC01549A6NIU2 74 aa10.94□□□□□ -0.66
CDH1-213ENST00000612417 LINC01619G3V211 115 aa10.94□□□□□ -0.66
CDH1-213ENST00000612417 LY6G6DO95868 133 aa10.94□□□□□ -0.66
CDH1-213ENST00000612417 LGALS1P09382 135 aaKnown RBP10.94□□□□□ -0.66
CDH1-213ENST00000612417 BAALCQ8WXS3 180 aa10.94□□□□□ -0.66
CDH1-213ENST00000612417 UBE2E2Q96LR5 201 aa10.94□□□□□ -0.66
CDH1-213ENST00000612417 AGRNO00468 2067 aa10.94□□□□□ -0.66
CDH1-213ENST00000612417 ANK3Q12955 4377 aaKnown RBP10.94□□□□□ -0.66
CDH1-213ENST00000612417 CUBNO60494 3623 aa10.94□□□□□ -0.66
CDH1-213ENST00000612417 KHDC1LQ5JSQ8 128 aa10.94□□□□□ -0.66
CDH1-213ENST00000612417 NAA38Q9BRA0 125 aaKnown RBP10.94□□□□□ -0.66
CDH1-213ENST00000612417 SPXQ9BT56 116 aa10.94□□□□□ -0.66
CDH1-213ENST00000612417 ZNF418Q8TF45 676 aaPredicted RBP10.93□□□□□ -0.66
CDH1-213ENST00000612417 FABP2P12104 132 aa10.93□□□□□ -0.66
CDH1-213ENST00000612417 SMAGPQ0VAQ4 97 aa10.93□□□□□ -0.66
CDH1-213ENST00000612417 SAMD5Q5TGI4 173 aa10.93□□□□□ -0.66
CDH1-213ENST00000612417 RNF152Q8N8N0 203 aa10.93□□□□□ -0.66
CDH1-213ENST00000612417 SPCS1Q9Y6A9 102 aa10.93□□□□□ -0.66
CDH1-213ENST00000612417 SELENOKQ9Y6D0 94 aa10.93□□□□□ -0.66
CDH1-213ENST00000612417 POLR2KP53803 58 aaKnown RBP10.92□□□□□ -0.66
CDH1-213ENST00000612417 GEMIN7Q9H840 131 aaKnown RBP10.91□□□□□ -0.66
CDH1-213ENST00000612417 A0A0J9YX75 114 aa10.91□□□□□ -0.66
CDH1-213ENST00000612417 PRSS29PA6NIE9 313 aa10.91□□□□□ -0.66
CDH1-213ENST00000612417 E9PLD3 99 aa10.91□□□□□ -0.66
CDH1-213ENST00000612417 CD7P09564 240 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms