RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SMIM9A6NGZ8 99 aa12.2□□□□□ -0.46
RTN1-209ENST00000611068 GP9P14770 177 aa12.2□□□□□ -0.46
RTN1-209ENST00000611068 Q6Q795 121 aa12.2□□□□□ -0.46
RTN1-209ENST00000611068 THAP8Q8NA92 274 aa12.2□□□□□ -0.46
RTN1-209ENST00000611068 DUX5Q96PT3 197 aa12.2□□□□□ -0.46
RTN1-209ENST00000611068 ODF3Q96PU9 254 aa12.2□□□□□ -0.46
RTN1-209ENST00000611068 CUBNO60494 3623 aa12.19□□□□□ -0.46
RTN1-209ENST00000611068 ASIPP42127 132 aa12.19□□□□□ -0.46
RTN1-209ENST00000611068 MRPL23Q16540 153 aaKnown RBP12.19□□□□□ -0.46
RTN1-209ENST00000611068 TMEM126AQ9H061 195 aa12.19□□□□□ -0.46
RTN1-209ENST00000611068 C21orf62Q9NYP8 219 aa12.19□□□□□ -0.46
RTN1-209ENST00000611068 CR1P17927 2039 aa12.19□□□□□ -0.46
RTN1-209ENST00000611068 IGKV1-17P01599 117 aa12.19□□□□□ -0.46
RTN1-209ENST00000611068 IGHV4-31P0DP07 118 aa12.19□□□□□ -0.46
RTN1-209ENST00000611068 CRIP2P52943 208 aaPredicted RBP12.19□□□□□ -0.46
RTN1-209ENST00000611068 DEFB112Q30KQ8 113 aa12.19□□□□□ -0.46
RTN1-209ENST00000611068 PVRIGQ6DKI7 326 aa12.19□□□□□ -0.46
RTN1-209ENST00000611068 C15orf53Q8NAA6 179 aa12.19□□□□□ -0.46
RTN1-209ENST00000611068 TRAV25A0A0B4J276 109 aa12.18□□□□□ -0.46
RTN1-209ENST00000611068 RPL7P18124 248 aaKnown RBP12.18□□□□□ -0.46
RTN1-209ENST00000611068 IGHV4-59P01825 116 aa12.18□□□□□ -0.46
RTN1-209ENST00000611068 UBE2D1P51668 147 aa12.18□□□□□ -0.46
RTN1-209ENST00000611068 TMEM78Q5T7P6 136 aa12.18□□□□□ -0.46
RTN1-209ENST00000611068 IGLV11-55A0A075B6I3 123 aa12.17□□□□□ -0.46
RTN1-209ENST00000611068 LGALS1P09382 135 aaKnown RBP12.17□□□□□ -0.46
RTN1-209ENST00000611068 KRTAP1-3Q8IUG1 177 aa12.17□□□□□ -0.46
RTN1-209ENST00000611068 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
RTN1-209ENST00000611068 A4D1N5 150 aa12.17□□□□□ -0.46
RTN1-209ENST00000611068 OR10J6PQ8NGY7 276 aa12.17□□□□□ -0.46
RTN1-209ENST00000611068 C15orf32Q32M92 178 aa12.16□□□□□ -0.46
RTN1-209ENST00000611068 BEX4Q9NWD9 120 aaPredicted RBP12.16□□□□□ -0.46
RTN1-209ENST00000611068 MOB4Q9Y3A3 225 aa12.16□□□□□ -0.46
RTN1-209ENST00000611068 ATP5LO75964 103 aa12.16□□□□□ -0.46
RTN1-209ENST00000611068 GATA1P15976 413 aaPredicted RBP12.16□□□□□ -0.46
RTN1-209ENST00000611068 SLC25A20O43772 301 aa12.15□□□□□ -0.46
RTN1-209ENST00000611068 SCGB1C2P0DMR2 95 aa12.15□□□□□ -0.46
RTN1-209ENST00000611068 C8orf49Q96NF6 230 aa12.15□□□□□ -0.46
RTN1-209ENST00000611068 AAMDCQ9H7C9 122 aa12.15□□□□□ -0.46
RTN1-209ENST00000611068 F8W735 103 aaPredicted RBP12.15□□□□□ -0.46
RTN1-209ENST00000611068 SRSF9Q13242 221 aaKnown RBP eCLIP12.15□□□□□ -0.46
RTN1-209ENST00000611068 NF1P21359 2839 aa12.14□□□□□ -0.47
RTN1-209ENST00000611068 C9JAW5 83 aa12.14□□□□□ -0.47
RTN1-209ENST00000611068 PLEKHB2Q96CS7 222 aa12.14□□□□□ -0.47
RTN1-209ENST00000611068 LINC01619G3V211 115 aa12.14□□□□□ -0.47
RTN1-209ENST00000611068 CD7P09564 240 aa12.14□□□□□ -0.47
RTN1-209ENST00000611068 Q8N1Y9 231 aa12.14□□□□□ -0.47
RTN1-209ENST00000611068 NTN5Q8WTR8 489 aaPredicted RBP12.14□□□□□ -0.47
RTN1-209ENST00000611068 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
RTN1-209ENST00000611068 FAM19A5Q7Z5A7 132 aaPredicted RBP12.13□□□□□ -0.47
RTN1-209ENST00000611068 TRPT1Q86TN4 253 aaKnown RBP12.13□□□□□ -0.47
RTN1-209ENST00000611068 MFAP4P55083 255 aa12.13□□□□□ -0.47
RTN1-209ENST00000611068 CLEC19AQ6UXS0 136 aa12.13□□□□□ -0.47
RTN1-209ENST00000611068 OTORQ9NRC9 128 aa12.13□□□□□ -0.47
RTN1-209ENST00000611068 SPANXA1Q9NS26 97 aa12.13□□□□□ -0.47
RTN1-209ENST00000611068 IGHV3OR16-13A0A075B7E8 117 aa12.12□□□□□ -0.47
RTN1-209ENST00000611068 IGHV3-74A0A0B4J1X5 117 aa12.12□□□□□ -0.47
RTN1-209ENST00000611068 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
RTN1-209ENST00000611068 HIGD1AQ9Y241 93 aa12.12□□□□□ -0.47
RTN1-209ENST00000611068 A6NDX4 124 aa12.12□□□□□ -0.47
RTN1-209ENST00000611068 RNF185Q96GF1 192 aa12.12□□□□□ -0.47
RTN1-209ENST00000611068 C17orf77Q96MU5 243 aa12.12□□□□□ -0.47
RTN1-209ENST00000611068 TRAV41A0A0B4J266 112 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 IGHV3-66A0A0C4DH42 116 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 LINC01546A6NGU7 62 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 SLC25A39Q9BZJ4 359 aaPredicted RBP12.11□□□□□ -0.47
RTN1-209ENST00000611068 KLK5Q9Y337 293 aaPredicted RBP12.11□□□□□ -0.47
RTN1-209ENST00000611068 IGHV3-49A0A0A0MS15 119 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 TEX49A0A1B0GTD5 131 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 TNFRSF6BO95407 300 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 IGHV3-11P01762 117 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 LYRM7Q5U5X0 104 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 FAM110DQ8TAY7 271 aaPredicted RBP12.11□□□□□ -0.47
RTN1-209ENST00000611068 MTORP42345 2549 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 MYO9AB2RTY4 2548 aa12.11□□□□□ -0.47
RTN1-209ENST00000611068 CTSGP08311 255 aa12.1□□□□□ -0.47
RTN1-209ENST00000611068 KLK15Q9H2R5 256 aa12.1□□□□□ -0.47
RTN1-209ENST00000611068 WIPF1O43516 503 aa12.1□□□□□ -0.47
RTN1-209ENST00000611068 C10orf99Q6UWK7 81 aa12.1□□□□□ -0.47
RTN1-209ENST00000611068 RNF125Q96EQ8 232 aa12.1□□□□□ -0.47
RTN1-209ENST00000611068 TRAV8-4A0A0B4J246 113 aa12.09□□□□□ -0.47
RTN1-209ENST00000611068 LRRC75A-AS1Q8N1F1 130 aa12.09□□□□□ -0.47
RTN1-209ENST00000611068 SCGB1D4Q6XE38 83 aa12.09□□□□□ -0.47
RTN1-209ENST00000611068 BAALCQ8WXS3 180 aa12.09□□□□□ -0.47
RTN1-209ENST00000611068 DUSP14O95147 198 aaKnown RBP12.08□□□□□ -0.47
RTN1-209ENST00000611068 TRGV3P03979 118 aa12.08□□□□□ -0.47
RTN1-209ENST00000611068 CCDC140Q96MF4 163 aa12.08□□□□□ -0.47
RTN1-209ENST00000611068 SETD2Q9BYW2 2564 aaPredicted RBP12.08□□□□□ -0.48
RTN1-209ENST00000611068 TRAV2A0A0B4J234 112 aa12.08□□□□□ -0.48
RTN1-209ENST00000611068 ZNF815PA8K554 130 aa12.08□□□□□ -0.48
RTN1-209ENST00000611068 HIST2H2BDQ6DRA6 164 aa12.08□□□□□ -0.48
RTN1-209ENST00000611068 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
RTN1-209ENST00000611068 AKAP9Q99996 3911 aa12.07□□□□□ -0.48
RTN1-209ENST00000611068 TRBV12-3P01733 135 aa12.07□□□□□ -0.48
RTN1-209ENST00000611068 M0R3E3 92 aa12.07□□□□□ -0.48
RTN1-209ENST00000611068 SH2D1AO60880 128 aa12.07□□□□□ -0.48
RTN1-209ENST00000611068 CFC1BP0CG36 223 aa12.07□□□□□ -0.48
RTN1-209ENST00000611068 CFC1P0CG37 223 aa12.07□□□□□ -0.48
RTN1-209ENST00000611068 PLNP26678 52 aa12.07□□□□□ -0.48
RTN1-209ENST00000611068 TMEM75Q8N9X5 138 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms